RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 RALGAPBQ86X10 1494 aa15.69■□□□□ 0.1
TPM3-223ENST00000611659 FRAT1Q92837 279 aaPredicted RBP15.69■□□□□ 0.1
TPM3-223ENST00000611659 EIF5BO60841 1220 aaKnown RBP15.68■□□□□ 0.1
TPM3-223ENST00000611659 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
TPM3-223ENST00000611659 CAMSAP2Q08AD1 1489 aa15.68■□□□□ 0.1
TPM3-223ENST00000611659 PRG4Q92954 1404 aaPredicted RBP15.67■□□□□ 0.1
TPM3-223ENST00000611659 ANKRD30AQ9BXX3 1397 aa15.67■□□□□ 0.1
TPM3-223ENST00000611659 ANKRD50Q9ULJ7 1429 aa15.66■□□□□ 0.1
TPM3-223ENST00000611659 UHRF1BP1Q6BDS2 1440 aa15.65■□□□□ 0.1
TPM3-223ENST00000611659 RGL3Q3MIN7 710 aa15.65■□□□□ 0.1
TPM3-223ENST00000611659 PARD3Q8TEW0 1356 aa15.64■□□□□ 0.09
TPM3-223ENST00000611659 RGS3P49796 1198 aa15.64■□□□□ 0.09
TPM3-223ENST00000611659 NUP153P49790 1475 aaKnown RBP15.64■□□□□ 0.09
TPM3-223ENST00000611659 CHMP7Q8WUX9 453 aaPredicted RBP15.63■□□□□ 0.09
TPM3-223ENST00000611659 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
TPM3-223ENST00000611659 FRAT2O75474 233 aaPredicted RBP15.61■□□□□ 0.09
TPM3-223ENST00000611659 NBPF1Q3BBV0 1214 aa15.61■□□□□ 0.09
TPM3-223ENST00000611659 KIAA0586Q9BVV6 1533 aa15.61■□□□□ 0.09
TPM3-223ENST00000611659 PER1O15534 1290 aaPredicted RBP15.61■□□□□ 0.09
TPM3-223ENST00000611659 FAM161AQ3B820 660 aa15.6■□□□□ 0.09
TPM3-223ENST00000611659 PANK3Q9H999 370 aa15.6■□□□□ 0.09
TPM3-223ENST00000611659 CENPQQ7L2Z9 268 aaPredicted RBP15.6■□□□□ 0.09
TPM3-223ENST00000611659 TROQ12816 1431 aaPredicted RBP15.59■□□□□ 0.09
TPM3-223ENST00000611659 GPATCH8Q9UKJ3 1502 aaKnown RBP15.59■□□□□ 0.09
TPM3-223ENST00000611659 TSPY4P0CV99 314 aa15.58■□□□□ 0.08
TPM3-223ENST00000611659 TSPY10P0CW01 314 aa15.58■□□□□ 0.08
TPM3-223ENST00000611659 ADAMTS8Q9UP79 889 aa15.58■□□□□ 0.08
TPM3-223ENST00000611659 KDM2BQ8NHM5 1336 aa15.57■□□□□ 0.08
TPM3-223ENST00000611659 C8orf34Q49A92 452 aa15.57■□□□□ 0.08
TPM3-223ENST00000611659 ARHGEF12Q9NZN5 1544 aa15.56■□□□□ 0.08
TPM3-223ENST00000611659 ADGRL2O95490 1459 aa15.55■□□□□ 0.08
TPM3-223ENST00000611659 ADGBQ8N7X0 1667 aa15.55■□□□□ 0.08
TPM3-223ENST00000611659 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
TPM3-223ENST00000611659 DISP1Q96F81 1524 aa15.54■□□□□ 0.08
TPM3-223ENST00000611659 RAPGEF6Q8TEU7 1601 aa15.54■□□□□ 0.08
TPM3-223ENST00000611659 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
TPM3-223ENST00000611659 ADAMTS12P58397 1594 aa15.54■□□□□ 0.08
TPM3-223ENST00000611659 PLB1Q6P1J6 1458 aa15.54■□□□□ 0.08
TPM3-223ENST00000611659 DISP3Q9P2K9 1392 aa15.53■□□□□ 0.08
TPM3-223ENST00000611659 BLMP54132 1417 aaPredicted RBP15.53■□□□□ 0.08
TPM3-223ENST00000611659 HNRNPMP52272 730 aaKnown RBP eCLIP15.53■□□□□ 0.087e-7■■■□□ 16.5
TPM3-223ENST00000611659 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.53■□□□□ 0.08
TPM3-223ENST00000611659 KIAA0556O60303 1618 aa15.53■□□□□ 0.08
TPM3-223ENST00000611659 C9orf84Q5VXU9 1444 aa15.53■□□□□ 0.08
TPM3-223ENST00000611659 E9PCH4 1651 aa15.53■□□□□ 0.08
TPM3-223ENST00000611659 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.08
TPM3-223ENST00000611659 DUSP27Q5VZP5 1158 aa15.52■□□□□ 0.07
TPM3-223ENST00000611659 JPH4Q96JJ6 628 aa15.52■□□□□ 0.07
TPM3-223ENST00000611659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.074e-9■■■■■ 28.1
TPM3-223ENST00000611659 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
TPM3-223ENST00000611659 TMF1P82094 1093 aa15.5■□□□□ 0.07
TPM3-223ENST00000611659 PLEKHH1Q9ULM0 1364 aa15.5■□□□□ 0.07
TPM3-223ENST00000611659 PLEKHD1A6NEE1 506 aa15.5■□□□□ 0.07
TPM3-223ENST00000611659 ITSN2Q9NZM3 1697 aa15.49■□□□□ 0.07
TPM3-223ENST00000611659 CCDC144AA2RUR9 1427 aa15.49■□□□□ 0.07
TPM3-223ENST00000611659 PRAG1Q86YV5 1406 aa15.49■□□□□ 0.07
TPM3-223ENST00000611659 TESK2Q96S53 571 aa15.49■□□□□ 0.07
TPM3-223ENST00000611659 ZMYM4Q5VZL5 1548 aa15.49■□□□□ 0.07
TPM3-223ENST00000611659 CCDC146Q8IYE0 955 aa15.48■□□□□ 0.07
TPM3-223ENST00000611659 KNSTRNQ9Y448 316 aa15.47■□□□□ 0.07
TPM3-223ENST00000611659 PLEKHH2Q8IVE3 1493 aa15.46■□□□□ 0.07
TPM3-223ENST00000611659 ARXQ96QS3 562 aa15.46■□□□□ 0.07
TPM3-223ENST00000611659 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
TPM3-223ENST00000611659 CROCC2H7BZ55 1655 aa15.46■□□□□ 0.06
TPM3-223ENST00000611659 COL17A1Q9UMD9 1497 aaPredicted RBP15.45■□□□□ 0.06
TPM3-223ENST00000611659 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
TPM3-223ENST00000611659 ERBINQ96RT1 1412 aa15.45■□□□□ 0.06
TPM3-223ENST00000611659 PPP2R1AP30153 589 aa15.45■□□□□ 0.06
TPM3-223ENST00000611659 UBE2Q2Q8WVN8 375 aa15.45■□□□□ 0.06
TPM3-223ENST00000611659 POGKQ9P215 609 aa15.45■□□□□ 0.06
TPM3-223ENST00000611659 BCAR3O75815 825 aa15.44■□□□□ 0.06
TPM3-223ENST00000611659 GRIN2AQ12879 1464 aa15.44■□□□□ 0.06
TPM3-223ENST00000611659 KDM5DQ9BY66 1539 aa15.44■□□□□ 0.06
TPM3-223ENST00000611659 FAM43AQ8N2R8 423 aa15.43■□□□□ 0.06
TPM3-223ENST00000611659 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
TPM3-223ENST00000611659 INSRP06213 1382 aa15.43■□□□□ 0.06
TPM3-223ENST00000611659 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
TPM3-223ENST00000611659 IGHDP01880 384 aa15.41■□□□□ 0.06
TPM3-223ENST00000611659 SLFN5Q08AF3 891 aa15.41■□□□□ 0.06
TPM3-223ENST00000611659 RSPH6AQ9H0K4 717 aa15.41■□□□□ 0.06
TPM3-223ENST00000611659 CANXP27824 592 aaKnown RBP15.41■□□□□ 0.06
TPM3-223ENST00000611659 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
TPM3-223ENST00000611659 TRPM1Q7Z4N2 1603 aa15.41■□□□□ 0.06
TPM3-223ENST00000611659 SEC24BO95487 1268 aa15.41■□□□□ 0.06
TPM3-223ENST00000611659 APAF1O14727 1248 aa15.4■□□□□ 0.06
TPM3-223ENST00000611659 FAM135AQ9P2D6 1515 aa15.39■□□□□ 0.05
TPM3-223ENST00000611659 BECN1Q14457 450 aa15.39■□□□□ 0.05
TPM3-223ENST00000611659 PTPRGP23470 1445 aa15.39■□□□□ 0.05
TPM3-223ENST00000611659 ZNF521Q96K83 1311 aa15.39■□□□□ 0.05
TPM3-223ENST00000611659 A2MP01023 1474 aa15.38■□□□□ 0.05
TPM3-223ENST00000611659 SHANK2Q9UPX8 1470 aa15.38■□□□□ 0.05
TPM3-223ENST00000611659 GPRASP1Q5JY77 1395 aa15.38■□□□□ 0.05
TPM3-223ENST00000611659 USP19O94966 1318 aa15.37■□□□□ 0.05
TPM3-223ENST00000611659 COG6Q9Y2V7 657 aa15.37■□□□□ 0.05
TPM3-223ENST00000611659 CDC42BPAQ5VT25 1732 aa15.36■□□□□ 0.05
TPM3-223ENST00000611659 AMER1Q5JTC6 1135 aaPredicted RBP15.35■□□□□ 0.05
TPM3-223ENST00000611659 SPRYD3Q8NCJ5 442 aa15.35■□□□□ 0.05
TPM3-223ENST00000611659 PANK1Q8TE04 598 aa15.35■□□□□ 0.05
TPM3-223ENST00000611659 MAGI2Q86UL8 1455 aa15.35■□□□□ 0.05
TPM3-223ENST00000611659 ADCY10Q96PN6 1610 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms