RNA–Protein interactions for RNA: ENST00000610642.4

SLC6A6-203, Transcript of solute carrier family 6 member 6, humanhuman

TSL 2

Gene SLC6A6, Length 1,983 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-203ENST00000610642 COL17A1Q9UMD9 1497 aaPredicted RBP27.7■■■□□ 2.02
SLC6A6-203ENST00000610642 DIP2CQ9Y2E4 1556 aa27.69■■■□□ 2.02
SLC6A6-203ENST00000610642 YEATS2Q9ULM3 1422 aa27.66■■■□□ 2.02
SLC6A6-203ENST00000610642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.64■■■□□ 2.015e-6■□□□□ 10.5
SLC6A6-203ENST00000610642 DEPDC5O75140 1603 aa27.64■■■□□ 2.01
SLC6A6-203ENST00000610642 FAM135AQ9P2D6 1515 aa27.63■■■□□ 2.01
SLC6A6-203ENST00000610642 KIF3BO15066 747 aa27.63■■■□□ 2.01
SLC6A6-203ENST00000610642 IQGAP3Q86VI3 1631 aa27.62■■■□□ 2.01
SLC6A6-203ENST00000610642 PKD2Q13563 968 aa27.59■■■□□ 2.01
SLC6A6-203ENST00000610642 BCORL1Q5H9F3 1711 aa27.58■■■□□ 2.01
SLC6A6-203ENST00000610642 FOXD1Q16676 465 aa27.58■■■□□ 2.01
SLC6A6-203ENST00000610642 ATP10AO60312 1499 aa27.57■■■□□ 2
SLC6A6-203ENST00000610642 SIN3AQ96ST3 1273 aa27.57■■■□□ 2
SLC6A6-203ENST00000610642 PRDM15P57071 1507 aaPredicted RBP27.56■■■□□ 2
SLC6A6-203ENST00000610642 RNF17Q9BXT8 1623 aaKnown RBP27.55■■■□□ 2
SLC6A6-203ENST00000610642 KANK1Q14678 1352 aa27.55■■■□□ 2
SLC6A6-203ENST00000610642 MROH1Q8NDA8 1641 aa27.54■■■□□ 2
SLC6A6-203ENST00000610642 ANKRD30BQ9BXX2 1392 aa27.54■■■□□ 2
SLC6A6-203ENST00000610642 REREQ9P2R6 1566 aa27.53■■■□□ 2
SLC6A6-203ENST00000610642 ARHGEF40Q8TER5 1519 aa27.53■■■□□ 2
SLC6A6-203ENST00000610642 VWDEQ8N2E2 1590 aa27.53■■■□□ 2
SLC6A6-203ENST00000610642 NEUROD1Q13562 356 aa27.52■■■□□ 2
SLC6A6-203ENST00000610642 GGT6Q6P531 493 aa27.46■■□□□ 1.99
SLC6A6-203ENST00000610642 TIMELESSQ9UNS1 1208 aa27.45■■□□□ 1.98
SLC6A6-203ENST00000610642 AGLP35573 1532 aa27.45■■□□□ 1.98
SLC6A6-203ENST00000610642 TET3O43151 1660 aa27.44■■□□□ 1.98
SLC6A6-203ENST00000610642 LMTK2Q8IWU2 1503 aa27.42■■□□□ 1.98
SLC6A6-203ENST00000610642 RPRD2Q5VT52 1461 aaKnown RBP27.4■■□□□ 1.98
SLC6A6-203ENST00000610642 E9PCH4 1651 aa27.39■■□□□ 1.98
SLC6A6-203ENST00000610642 TONSLQ96HA7 1378 aa27.39■■□□□ 1.97
SLC6A6-203ENST00000610642 CEP152O94986 1710 aa27.38■■□□□ 1.97
SLC6A6-203ENST00000610642 SIGLEC1Q9BZZ2 1709 aa27.37■■□□□ 1.97
SLC6A6-203ENST00000610642 EFCAB6Q5THR3 1501 aa27.36■■□□□ 1.97
SLC6A6-203ENST00000610642 WASHC2CQ9Y4E1 1318 aa27.36■■□□□ 1.97
SLC6A6-203ENST00000610642 ABCC3O15438 1527 aa27.35■■□□□ 1.97
SLC6A6-203ENST00000610642 ZC3H13Q5T200 1668 aaKnown RBP27.34■■□□□ 1.97
SLC6A6-203ENST00000610642 PLA2R1Q13018 1463 aa27.33■■□□□ 1.97
SLC6A6-203ENST00000610642 PPP6R1Q9UPN7 881 aa27.3■■□□□ 1.96
SLC6A6-203ENST00000610642 CCDC144AA2RUR9 1427 aa27.3■■□□□ 1.96
SLC6A6-203ENST00000610642 PTPRTO14522 1441 aa27.29■■□□□ 1.96
SLC6A6-203ENST00000610642 CAMSAP1Q5T5Y3 1602 aa27.28■■□□□ 1.96
SLC6A6-203ENST00000610642 SPHKAPQ2M3C7 1700 aa27.27■■□□□ 1.96
SLC6A6-203ENST00000610642 TRPM2O94759 1503 aa27.26■■□□□ 1.95
SLC6A6-203ENST00000610642 NPATQ14207 1427 aa27.25■■□□□ 1.95
SLC6A6-203ENST00000610642 PPP1R15AO75807 674 aaPredicted RBP27.24■■□□□ 1.95
SLC6A6-203ENST00000610642 ARID4BQ4LE39 1312 aaPredicted RBP27.24■■□□□ 1.95
SLC6A6-203ENST00000610642 ARHGAP31Q2M1Z3 1444 aa27.23■■□□□ 1.95
SLC6A6-203ENST00000610642 MLECQ14165 292 aa27.22■■□□□ 1.95
SLC6A6-203ENST00000610642 L3MBTL2Q969R5 705 aa27.22■■□□□ 1.95
SLC6A6-203ENST00000610642 CLTCQ00610 1675 aaKnown RBP27.16■■□□□ 1.94
SLC6A6-203ENST00000610642 CLTCL1P53675 1640 aa27.15■■□□□ 1.94
SLC6A6-203ENST00000610642 CNTLNQ9NXG0 1405 aa27.15■■□□□ 1.94
SLC6A6-203ENST00000610642 ESF1Q9H501 851 aaKnown RBP27.13■■□□□ 1.93
SLC6A6-203ENST00000610642 NOS1P29475 1434 aa27.13■■□□□ 1.93
SLC6A6-203ENST00000610642 CFAP65Q6ZU64 1925 aaKnown RBP27.1■■□□□ 1.93
SLC6A6-203ENST00000610642 UGGT1Q9NYU2 1555 aa27.09■■□□□ 1.93
SLC6A6-203ENST00000610642 SPATA31E1Q6ZUB1 1445 aa27.08■■□□□ 1.93
SLC6A6-203ENST00000610642 PREX1Q8TCU6 1659 aa27.08■■□□□ 1.93
SLC6A6-203ENST00000610642 RGL3Q3MIN7 710 aa27.06■■□□□ 1.92
SLC6A6-203ENST00000610642 SYNMO15061 1565 aa27.06■■□□□ 1.92
SLC6A6-203ENST00000610642 NEURL4Q96JN8 1562 aa27.06■■□□□ 1.92
SLC6A6-203ENST00000610642 ZMYM3Q14202 1370 aa27.04■■□□□ 1.92
SLC6A6-203ENST00000610642 ERVK-7P63135 1459 aa27.04■■□□□ 1.92
SLC6A6-203ENST00000610642 DCAF11Q8TEB1 546 aa27.03■■□□□ 1.92
SLC6A6-203ENST00000610642 KIF1BO60333 1816 aa27.03■■□□□ 1.92
SLC6A6-203ENST00000610642 PIK3C2BO00750 1634 aa27.02■■□□□ 1.92
SLC6A6-203ENST00000610642 MROH2AA6NES4 1674 aa27.02■■□□□ 1.92
SLC6A6-203ENST00000610642 FBXO31Q5XUX0 539 aaPredicted RBP27.01■■□□□ 1.91
SLC6A6-203ENST00000610642 SLC52A1Q9NWF4 448 aa27■■□□□ 1.91
SLC6A6-203ENST00000610642 SPATA31D1Q6ZQQ2 1576 aa26.99■■□□□ 1.91
SLC6A6-203ENST00000610642 UHRF1BP1Q6BDS2 1440 aa26.99■■□□□ 1.91
SLC6A6-203ENST00000610642 NBPF8Q3BBV2 869 aa26.99■■□□□ 1.91
SLC6A6-203ENST00000610642 KDM2AQ9Y2K7 1162 aa26.98■■□□□ 1.91
SLC6A6-203ENST00000610642 FER1L4A9Z1Z3 1794 aa26.97■■□□□ 1.91
SLC6A6-203ENST00000610642 ADGRB3O60242 1522 aa26.97■■□□□ 1.91
SLC6A6-203ENST00000610642 IDI1Q13907 227 aa26.94■■□□□ 1.9
SLC6A6-203ENST00000610642 ZNF326Q5BKZ1 582 aaKnown RBP26.94■■□□□ 1.9
SLC6A6-203ENST00000610642 ZNF316A6NFI3 1004 aaPredicted RBP26.93■■□□□ 1.9
SLC6A6-203ENST00000610642 CHGAP10645 457 aaKnown RBP26.93■■□□□ 1.9
SLC6A6-203ENST00000610642 STAC3Q96MF2 364 aa26.93■■□□□ 1.9
SLC6A6-203ENST00000610642 PRAG1Q86YV5 1406 aa26.91■■□□□ 1.9
SLC6A6-203ENST00000610642 C3P01024 1663 aa26.87■■□□□ 1.89
SLC6A6-203ENST00000610642 MADDQ8WXG6 1647 aa26.87■■□□□ 1.89
SLC6A6-203ENST00000610642 RALGAPBQ86X10 1494 aa26.86■■□□□ 1.89
SLC6A6-203ENST00000610642 ADAMTSL3P82987 1691 aa26.86■■□□□ 1.89
SLC6A6-203ENST00000610642 IFT172Q9UG01 1749 aa26.85■■□□□ 1.89
SLC6A6-203ENST00000610642 TNRQ92752 1358 aa26.85■■□□□ 1.89
SLC6A6-203ENST00000610642 TMEM131LA2VDJ0 1609 aa26.85■■□□□ 1.89
SLC6A6-203ENST00000610642 RPGRIP1LQ68CZ1 1315 aa26.85■■□□□ 1.89
SLC6A6-203ENST00000610642 MYOM2P54296 1465 aa26.84■■□□□ 1.89
SLC6A6-203ENST00000610642 CEBPAP49715 358 aaPredicted RBP26.83■■□□□ 1.89
SLC6A6-203ENST00000610642 TRPM1Q7Z4N2 1603 aa26.82■■□□□ 1.88
SLC6A6-203ENST00000610642 RIMS1Q86UR5 1692 aaKnown RBP26.81■■□□□ 1.88
SLC6A6-203ENST00000610642 PPLO60437 1756 aa26.8■■□□□ 1.88
SLC6A6-203ENST00000610642 STAG3Q9UJ98 1225 aa26.79■■□□□ 1.88
SLC6A6-203ENST00000610642 MYO5BQ9ULV0 1848 aa26.78■■□□□ 1.88
SLC6A6-203ENST00000610642 NEXMIFQ5QGS0 1516 aa26.77■■□□□ 1.88
SLC6A6-203ENST00000610642 EIF4G2P78344 907 aaKnown RBP eCLIP26.77■■□□□ 1.881e-7■■■■■ 37.3
SLC6A6-203ENST00000610642 ROCK2O75116 1388 aaKnown RBP26.76■■□□□ 1.88
SLC6A6-203ENST00000610642 NRXN1Q9ULB1 1477 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms