RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 ATP7AQ04656 1500 aa20.89■□□□□ 0.94
LINC01278-206ENST00000610088 SYCP2Q9BX26 1530 aa20.89■□□□□ 0.94
LINC01278-206ENST00000610088 PLXNC1O60486 1568 aa20.89■□□□□ 0.93
LINC01278-206ENST00000610088 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
LINC01278-206ENST00000610088 MED14O60244 1454 aa20.84■□□□□ 0.93
LINC01278-206ENST00000610088 STRCP1A6NGW2 1772 aa20.84■□□□□ 0.93
LINC01278-206ENST00000610088 CDC42BPAQ5VT25 1732 aa20.83■□□□□ 0.92
LINC01278-206ENST00000610088 FAM135AQ9P2D6 1515 aa20.83■□□□□ 0.92
LINC01278-206ENST00000610088 UPF1Q92900 1129 aaKnown RBP eCLIP20.82■□□□□ 0.92
LINC01278-206ENST00000610088 IQGAP1P46940 1657 aa20.82■□□□□ 0.92
LINC01278-206ENST00000610088 SYNMO15061 1565 aa20.81■□□□□ 0.92
LINC01278-206ENST00000610088 UGGT1Q9NYU2 1555 aa20.8■□□□□ 0.92
LINC01278-206ENST00000610088 DEPDC5O75140 1603 aa20.8■□□□□ 0.92
LINC01278-206ENST00000610088 INO80Q9ULG1 1556 aaPredicted RBP20.8■□□□□ 0.92
LINC01278-206ENST00000610088 CCDC18Q5T9S5 1454 aa20.79■□□□□ 0.92
LINC01278-206ENST00000610088 SRCAPQ6ZRS2 3230 aa20.78■□□□□ 0.92
LINC01278-206ENST00000610088 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
LINC01278-206ENST00000610088 PZPP20742 1482 aa20.77■□□□□ 0.92
LINC01278-206ENST00000610088 MIA2Q96PC5 1412 aa20.77■□□□□ 0.91
LINC01278-206ENST00000610088 NLRP1Q9C000 1473 aa20.75■□□□□ 0.91
LINC01278-206ENST00000610088 TRIM52Q96A61 297 aa20.75■□□□□ 0.91
LINC01278-206ENST00000610088 FAM135BQ49AJ0 1406 aa20.75■□□□□ 0.91
LINC01278-206ENST00000610088 WASHC2CQ9Y4E1 1318 aa20.75■□□□□ 0.91
LINC01278-206ENST00000610088 KIF3BO15066 747 aa20.74■□□□□ 0.91
LINC01278-206ENST00000610088 CFDP1Q9UEE9 299 aaPredicted RBP20.74■□□□□ 0.91
LINC01278-206ENST00000610088 KIAA1107Q9UPP5 1409 aa20.74■□□□□ 0.91
LINC01278-206ENST00000610088 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
LINC01278-206ENST00000610088 ADGBQ8N7X0 1667 aa20.73■□□□□ 0.91
LINC01278-206ENST00000610088 GPATCH8Q9UKJ3 1502 aaKnown RBP20.73■□□□□ 0.91
LINC01278-206ENST00000610088 PLEKHH2Q8IVE3 1493 aa20.71■□□□□ 0.91
LINC01278-206ENST00000610088 KDM5DQ9BY66 1539 aa20.69■□□□□ 0.9
LINC01278-206ENST00000610088 DHX29Q7Z478 1369 aaKnown RBP20.69■□□□□ 0.9
LINC01278-206ENST00000610088 CCNB3Q8WWL7 1395 aa20.63■□□□□ 0.89
LINC01278-206ENST00000610088 MEX3CQ5U5Q3 659 aaKnown RBP20.63■□□□□ 0.89
LINC01278-206ENST00000610088 ROBO1Q9Y6N7 1651 aa20.63■□□□□ 0.89
LINC01278-206ENST00000610088 XIRP1Q702N8 1843 aaKnown RBP20.62■□□□□ 0.89
LINC01278-206ENST00000610088 ZNF644Q9H582 1327 aaPredicted RBP20.62■□□□□ 0.89
LINC01278-206ENST00000610088 ZC3H13Q5T200 1668 aaKnown RBP20.62■□□□□ 0.89
LINC01278-206ENST00000610088 CEP162Q5TB80 1403 aa20.61■□□□□ 0.89
LINC01278-206ENST00000610088 TMEM94Q12767 1356 aa20.6■□□□□ 0.89
LINC01278-206ENST00000610088 JCADQ9P266 1359 aa20.6■□□□□ 0.89
LINC01278-206ENST00000610088 ZNF772Q68DY9 489 aaPredicted RBP20.6■□□□□ 0.89
LINC01278-206ENST00000610088 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
LINC01278-206ENST00000610088 RBM33Q96EV2 1170 aaKnown RBP20.6■□□□□ 0.89
LINC01278-206ENST00000610088 SCAF11Q99590 1463 aaKnown RBP20.6■□□□□ 0.89
LINC01278-206ENST00000610088 LTKP29376 864 aa20.59■□□□□ 0.89
LINC01278-206ENST00000610088 RTEL1-TNFRSF6BF6WH68 1400 aa20.57■□□□□ 0.88
LINC01278-206ENST00000610088 RXRBP28702 533 aa20.56■□□□□ 0.88
LINC01278-206ENST00000610088 PROSER2Q86WR7 435 aaPredicted RBP20.55■□□□□ 0.88
LINC01278-206ENST00000610088 MTUS2Q5JR59 1369 aa20.55■□□□□ 0.88
LINC01278-206ENST00000610088 EID1Q9Y6B2 187 aa20.53■□□□□ 0.88
LINC01278-206ENST00000610088 MBD5Q9P267 1494 aa20.53■□□□□ 0.88
LINC01278-206ENST00000610088 PHLPP1O60346 1717 aa20.53■□□□□ 0.88
LINC01278-206ENST00000610088 LRRC9Q6ZRR7 1453 aa20.51■□□□□ 0.87
LINC01278-206ENST00000610088 LRP6O75581 1613 aa20.5■□□□□ 0.87
LINC01278-206ENST00000610088 LOC105371045A0A1W2PR82 267 aa20.5■□□□□ 0.87
LINC01278-206ENST00000610088 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
LINC01278-206ENST00000610088 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
LINC01278-206ENST00000610088 EHBP1L1Q8N3D4 1523 aa20.48■□□□□ 0.87
LINC01278-206ENST00000610088 UBR1Q8IWV7 1749 aa20.48■□□□□ 0.87
LINC01278-206ENST00000610088 KCNA6P17658 529 aa20.48■□□□□ 0.87
LINC01278-206ENST00000610088 NCOA2Q15596 1464 aa20.47■□□□□ 0.87
LINC01278-206ENST00000610088 SPATA31A6Q5VVP1 1343 aa20.47■□□□□ 0.87
LINC01278-206ENST00000610088 MAP3K1Q13233 1512 aa20.47■□□□□ 0.87
LINC01278-206ENST00000610088 MSH6P52701 1360 aa20.46■□□□□ 0.87
LINC01278-206ENST00000610088 ARHGAP23Q9P227 1491 aa20.45■□□□□ 0.86
LINC01278-206ENST00000610088 SLIT1O75093 1534 aa20.44■□□□□ 0.86
LINC01278-206ENST00000610088 ABCC3O15438 1527 aa20.43■□□□□ 0.86
LINC01278-206ENST00000610088 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
LINC01278-206ENST00000610088 NUTM2BA6NNL0 878 aaPredicted RBP20.42■□□□□ 0.86
LINC01278-206ENST00000610088 NUTM2EB1AL46 878 aaPredicted RBP20.42■□□□□ 0.86
LINC01278-206ENST00000610088 NUTM2AQ8IVF1 878 aaPredicted RBP20.42■□□□□ 0.86
LINC01278-206ENST00000610088 CCDC141Q6ZP82 1450 aa20.42■□□□□ 0.86
LINC01278-206ENST00000610088 NUTM2DQ5VT03 806 aaPredicted RBP20.41■□□□□ 0.86
LINC01278-206ENST00000610088 STAG3Q9UJ98 1225 aa20.41■□□□□ 0.86
LINC01278-206ENST00000610088 CDK12Q9NYV4 1490 aaPredicted RBP20.41■□□□□ 0.86
LINC01278-206ENST00000610088 COL16A1Q07092 1604 aaPredicted RBP20.4■□□□□ 0.86
LINC01278-206ENST00000610088 CFAP65Q6ZU64 1925 aaKnown RBP20.4■□□□□ 0.86
LINC01278-206ENST00000610088 TIAM1Q13009 1591 aa20.39■□□□□ 0.85
LINC01278-206ENST00000610088 PRDM15P57071 1507 aaPredicted RBP20.39■□□□□ 0.85
LINC01278-206ENST00000610088 ZRANB1Q9UGI0 708 aa20.39■□□□□ 0.85
LINC01278-206ENST00000610088 FGD6Q6ZV73 1430 aa20.38■□□□□ 0.85
LINC01278-206ENST00000610088 VPS8Q8N3P4 1428 aa20.38■□□□□ 0.85
LINC01278-206ENST00000610088 TMEM2Q9UHN6 1383 aa20.37■□□□□ 0.85
LINC01278-206ENST00000610088 AFF2P51816 1311 aa20.37■□□□□ 0.85
LINC01278-206ENST00000610088 TSPY4P0CV99 314 aa20.36■□□□□ 0.85
LINC01278-206ENST00000610088 TSPY10P0CW01 314 aa20.36■□□□□ 0.85
LINC01278-206ENST00000610088 BCANQ96GW7 911 aa20.36■□□□□ 0.85
LINC01278-206ENST00000610088 FOXD1Q16676 465 aa20.35■□□□□ 0.85
LINC01278-206ENST00000610088 RSPH4AQ5TD94 716 aa20.34■□□□□ 0.85
LINC01278-206ENST00000610088 RGS12O14924 1447 aa20.34■□□□□ 0.85
LINC01278-206ENST00000610088 NKTRP30414 1462 aaKnown RBP20.33■□□□□ 0.85
LINC01278-206ENST00000610088 C14orf37Q86TY3 774 aa20.31■□□□□ 0.84
LINC01278-206ENST00000610088 CAMSAP2Q08AD1 1489 aa20.3■□□□□ 0.84
LINC01278-206ENST00000610088 APLP2Q06481 763 aa20.3■□□□□ 0.84
LINC01278-206ENST00000610088 QTRT2Q9H974 415 aaKnown RBP20.3■□□□□ 0.84
LINC01278-206ENST00000610088 RBM6P78332 1123 aaKnown RBP20.29■□□□□ 0.84
LINC01278-206ENST00000610088 CEP152O94986 1710 aa20.29■□□□□ 0.84
LINC01278-206ENST00000610088 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
LINC01278-206ENST00000610088 PIK3C2BO00750 1634 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms