RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.321e-10■□□□□ 8.3
CTCFL-221ENST00000608903 KDM5DQ9BY66 1539 aa17.05■□□□□ 0.32
CTCFL-221ENST00000608903 ATP10AO60312 1499 aa17.05■□□□□ 0.32
CTCFL-221ENST00000608903 MROH1Q8NDA8 1641 aa17.05■□□□□ 0.32
CTCFL-221ENST00000608903 EIF2AK4Q9P2K8 1649 aaKnown RBP17.04■□□□□ 0.32
CTCFL-221ENST00000608903 FOXD1Q16676 465 aa17.04■□□□□ 0.32
CTCFL-221ENST00000608903 DEPDC5O75140 1603 aa17.04■□□□□ 0.32
CTCFL-221ENST00000608903 ARHGEF40Q8TER5 1519 aa17.03■□□□□ 0.32
CTCFL-221ENST00000608903 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
CTCFL-221ENST00000608903 BCORL1Q5H9F3 1711 aa17.01■□□□□ 0.31
CTCFL-221ENST00000608903 FAM135AQ9P2D6 1515 aa17.01■□□□□ 0.31
CTCFL-221ENST00000608903 IQGAP3Q86VI3 1631 aa17■□□□□ 0.31
CTCFL-221ENST00000608903 RNF17Q9BXT8 1623 aaKnown RBP17■□□□□ 0.31
CTCFL-221ENST00000608903 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
CTCFL-221ENST00000608903 VWDEQ8N2E2 1590 aa17■□□□□ 0.31
CTCFL-221ENST00000608903 REREQ9P2R6 1566 aa17■□□□□ 0.31
CTCFL-221ENST00000608903 PKD2Q13563 968 aa16.99■□□□□ 0.31
CTCFL-221ENST00000608903 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
CTCFL-221ENST00000608903 PRDM15P57071 1507 aaPredicted RBP16.98■□□□□ 0.31
CTCFL-221ENST00000608903 GGT6Q6P531 493 aa16.97■□□□□ 0.31
CTCFL-221ENST00000608903 CLSPNQ9HAW4 1339 aa16.96■□□□□ 0.31
CTCFL-221ENST00000608903 AGLP35573 1532 aa16.96■□□□□ 0.3
CTCFL-221ENST00000608903 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
CTCFL-221ENST00000608903 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
CTCFL-221ENST00000608903 CEP152O94986 1710 aa16.92■□□□□ 0.3
CTCFL-221ENST00000608903 E9PCH4 1651 aa16.91■□□□□ 0.3
CTCFL-221ENST00000608903 PLA2R1Q13018 1463 aa16.9■□□□□ 0.3
CTCFL-221ENST00000608903 KANK1Q14678 1352 aa16.9■□□□□ 0.3
CTCFL-221ENST00000608903 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
CTCFL-221ENST00000608903 ABCC3O15438 1527 aa16.9■□□□□ 0.3
CTCFL-221ENST00000608903 TET3O43151 1660 aa16.9■□□□□ 0.3
CTCFL-221ENST00000608903 LMTK2Q8IWU2 1503 aa16.9■□□□□ 0.3
CTCFL-221ENST00000608903 MLECQ14165 292 aa16.89■□□□□ 0.29
CTCFL-221ENST00000608903 WASHC2CQ9Y4E1 1318 aa16.87■□□□□ 0.29
CTCFL-221ENST00000608903 EFCAB6Q5THR3 1501 aa16.86■□□□□ 0.29
CTCFL-221ENST00000608903 ARID4BQ4LE39 1312 aaPredicted RBP16.85■□□□□ 0.29
CTCFL-221ENST00000608903 CAMSAP1Q5T5Y3 1602 aa16.84■□□□□ 0.29
CTCFL-221ENST00000608903 NPATQ14207 1427 aa16.84■□□□□ 0.29
CTCFL-221ENST00000608903 CFAP65Q6ZU64 1925 aaKnown RBP16.82■□□□□ 0.28
CTCFL-221ENST00000608903 PTPRTO14522 1441 aa16.82■□□□□ 0.28
CTCFL-221ENST00000608903 CLTCQ00610 1675 aaKnown RBP16.81■□□□□ 0.28
CTCFL-221ENST00000608903 ZC3H13Q5T200 1668 aaKnown RBP16.81■□□□□ 0.28
CTCFL-221ENST00000608903 RPRD2Q5VT52 1461 aaKnown RBP16.81■□□□□ 0.28
CTCFL-221ENST00000608903 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
CTCFL-221ENST00000608903 SPHKAPQ2M3C7 1700 aa16.79■□□□□ 0.28
CTCFL-221ENST00000608903 ARHGAP31Q2M1Z3 1444 aa16.78■□□□□ 0.28
CTCFL-221ENST00000608903 FBXO31Q5XUX0 539 aaPredicted RBP16.77■□□□□ 0.28
CTCFL-221ENST00000608903 TRPM2O94759 1503 aa16.77■□□□□ 0.28
CTCFL-221ENST00000608903 UGGT1Q9NYU2 1555 aa16.77■□□□□ 0.27
CTCFL-221ENST00000608903 NOS1P29475 1434 aa16.75■□□□□ 0.27
CTCFL-221ENST00000608903 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
CTCFL-221ENST00000608903 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
CTCFL-221ENST00000608903 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
CTCFL-221ENST00000608903 ZMYM3Q14202 1370 aa16.74■□□□□ 0.27
CTCFL-221ENST00000608903 SYNMO15061 1565 aa16.74■□□□□ 0.27
CTCFL-221ENST00000608903 PREX1Q8TCU6 1659 aa16.73■□□□□ 0.27
CTCFL-221ENST00000608903 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
CTCFL-221ENST00000608903 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
CTCFL-221ENST00000608903 PPP1R15AO75807 674 aaPredicted RBP16.72■□□□□ 0.27
CTCFL-221ENST00000608903 SPATA31E1Q6ZUB1 1445 aa16.7■□□□□ 0.26
CTCFL-221ENST00000608903 CNTLNQ9NXG0 1405 aa16.7■□□□□ 0.26
CTCFL-221ENST00000608903 FER1L4A9Z1Z3 1794 aa16.7■□□□□ 0.26
CTCFL-221ENST00000608903 ERVK-7P63135 1459 aa16.7■□□□□ 0.26
CTCFL-221ENST00000608903 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
CTCFL-221ENST00000608903 ADAMTSL3P82987 1691 aa16.69■□□□□ 0.26
CTCFL-221ENST00000608903 ESF1Q9H501 851 aaKnown RBP16.69■□□□□ 0.26
CTCFL-221ENST00000608903 MADDQ8WXG6 1647 aa16.68■□□□□ 0.26
CTCFL-221ENST00000608903 RGL3Q3MIN7 710 aa16.68■□□□□ 0.26
CTCFL-221ENST00000608903 PIK3C2BO00750 1634 aa16.68■□□□□ 0.26
CTCFL-221ENST00000608903 MROH2AA6NES4 1674 aa16.68■□□□□ 0.26
CTCFL-221ENST00000608903 SPATA31D1Q6ZQQ2 1576 aa16.67■□□□□ 0.26
CTCFL-221ENST00000608903 IDI1Q13907 227 aa16.67■□□□□ 0.26
CTCFL-221ENST00000608903 C3P01024 1663 aa16.66■□□□□ 0.26
CTCFL-221ENST00000608903 NBPF8Q3BBV2 869 aa16.65■□□□□ 0.26
CTCFL-221ENST00000608903 RIMS1Q86UR5 1692 aaKnown RBP16.64■□□□□ 0.25
CTCFL-221ENST00000608903 KIF1BO60333 1816 aa16.63■□□□□ 0.25
CTCFL-221ENST00000608903 PLPPR3Q6T4P5 718 aa16.62■□□□□ 0.25
CTCFL-221ENST00000608903 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
CTCFL-221ENST00000608903 ADGRB3O60242 1522 aa16.61■□□□□ 0.25
CTCFL-221ENST00000608903 KDM2AQ9Y2K7 1162 aa16.61■□□□□ 0.25
CTCFL-221ENST00000608903 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
CTCFL-221ENST00000608903 CHGAP10645 457 aaKnown RBP16.6■□□□□ 0.25
CTCFL-221ENST00000608903 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
CTCFL-221ENST00000608903 MYO5BQ9ULV0 1848 aa16.6■□□□□ 0.25
CTCFL-221ENST00000608903 TNRQ92752 1358 aa16.59■□□□□ 0.25
CTCFL-221ENST00000608903 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
CTCFL-221ENST00000608903 UHRF1BP1Q6BDS2 1440 aa16.57■□□□□ 0.24
CTCFL-221ENST00000608903 IFT172Q9UG01 1749 aa16.56■□□□□ 0.24
CTCFL-221ENST00000608903 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
CTCFL-221ENST00000608903 PRAG1Q86YV5 1406 aa16.54■□□□□ 0.24
CTCFL-221ENST00000608903 KDM4FA0A1W2PPD8 638 aa16.54■□□□□ 0.24
CTCFL-221ENST00000608903 A2ML1A8K2U0 1454 aa16.53■□□□□ 0.24
CTCFL-221ENST00000608903 ADGRF5Q8IZF2 1346 aa16.53■□□□□ 0.24
CTCFL-221ENST00000608903 PTPRMP28827 1452 aa16.53■□□□□ 0.24
CTCFL-221ENST00000608903 PPLO60437 1756 aa16.53■□□□□ 0.24
CTCFL-221ENST00000608903 NEXMIFQ5QGS0 1516 aa16.52■□□□□ 0.24
CTCFL-221ENST00000608903 NUTM2DQ5VT03 806 aaPredicted RBP16.52■□□□□ 0.24
CTCFL-221ENST00000608903 UBR1Q8IWV7 1749 aa16.5■□□□□ 0.23
CTCFL-221ENST00000608903 MYOM2P54296 1465 aa16.49■□□□□ 0.23
CTCFL-221ENST00000608903 RPGRIP1LQ68CZ1 1315 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms