RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 EIF2AK4Q9P2K8 1649 aaKnown RBP16.54■□□□□ 0.24
CTCFL-214ENST00000608108 DHX29Q7Z478 1369 aaKnown RBP16.53■□□□□ 0.24
CTCFL-214ENST00000608108 UNC13BO14795 1591 aa16.51■□□□□ 0.23
CTCFL-214ENST00000608108 ATP10AO60312 1499 aa16.5■□□□□ 0.23
CTCFL-214ENST00000608108 BCORL1Q5H9F3 1711 aa16.5■□□□□ 0.23
CTCFL-214ENST00000608108 ACIN1Q9UKV3 1341 aaKnown RBP16.5■□□□□ 0.23
CTCFL-214ENST00000608108 REREQ9P2R6 1566 aa16.5■□□□□ 0.23
CTCFL-214ENST00000608108 DEPDC5O75140 1603 aa16.49■□□□□ 0.23
CTCFL-214ENST00000608108 TRIM52Q96A61 297 aa16.48■□□□□ 0.23
CTCFL-214ENST00000608108 RNF17Q9BXT8 1623 aaKnown RBP16.47■□□□□ 0.23
CTCFL-214ENST00000608108 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
CTCFL-214ENST00000608108 KDM5DQ9BY66 1539 aa16.47■□□□□ 0.23
CTCFL-214ENST00000608108 SIGLEC1Q9BZZ2 1709 aa16.46■□□□□ 0.23
CTCFL-214ENST00000608108 KIF3BO15066 747 aa16.45■□□□□ 0.22
CTCFL-214ENST00000608108 PRDM15P57071 1507 aaPredicted RBP16.45■□□□□ 0.22
CTCFL-214ENST00000608108 IQGAP3Q86VI3 1631 aa16.44■□□□□ 0.22
CTCFL-214ENST00000608108 MROH1Q8NDA8 1641 aa16.44■□□□□ 0.22
CTCFL-214ENST00000608108 NUP155O75694 1391 aa16.44■□□□□ 0.22
CTCFL-214ENST00000608108 CCER1Q8TC90 406 aaPredicted RBP16.44■□□□□ 0.22
CTCFL-214ENST00000608108 PZPP20742 1482 aa16.43■□□□□ 0.22
CTCFL-214ENST00000608108 AGLP35573 1532 aa16.43■□□□□ 0.22
CTCFL-214ENST00000608108 FAM135AQ9P2D6 1515 aa16.43■□□□□ 0.22
CTCFL-214ENST00000608108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.221e-10■□□□□ 8.3
CTCFL-214ENST00000608108 VWDEQ8N2E2 1590 aa16.4■□□□□ 0.22
CTCFL-214ENST00000608108 MPHOSPH9Q99550 1183 aa16.4■□□□□ 0.22
CTCFL-214ENST00000608108 KANK1Q14678 1352 aa16.39■□□□□ 0.21
CTCFL-214ENST00000608108 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
CTCFL-214ENST00000608108 CEP152O94986 1710 aa16.38■□□□□ 0.21
CTCFL-214ENST00000608108 GGT6Q6P531 493 aa16.38■□□□□ 0.21
CTCFL-214ENST00000608108 TET3O43151 1660 aa16.36■□□□□ 0.21
CTCFL-214ENST00000608108 ZC3H13Q5T200 1668 aaKnown RBP16.36■□□□□ 0.21
CTCFL-214ENST00000608108 ABCC3O15438 1527 aa16.35■□□□□ 0.21
CTCFL-214ENST00000608108 ARID4BQ4LE39 1312 aaPredicted RBP16.35■□□□□ 0.21
CTCFL-214ENST00000608108 LMTK2Q8IWU2 1503 aa16.34■□□□□ 0.21
CTCFL-214ENST00000608108 E9PCH4 1651 aa16.33■□□□□ 0.2
CTCFL-214ENST00000608108 PKD2Q13563 968 aa16.33■□□□□ 0.2
CTCFL-214ENST00000608108 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
CTCFL-214ENST00000608108 EFCAB6Q5THR3 1501 aa16.32■□□□□ 0.2
CTCFL-214ENST00000608108 CAMSAP1Q5T5Y3 1602 aa16.32■□□□□ 0.2
CTCFL-214ENST00000608108 WASHC2CQ9Y4E1 1318 aa16.32■□□□□ 0.2
CTCFL-214ENST00000608108 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
CTCFL-214ENST00000608108 MLECQ14165 292 aa16.31■□□□□ 0.2
CTCFL-214ENST00000608108 CLTCQ00610 1675 aaKnown RBP16.3■□□□□ 0.2
CTCFL-214ENST00000608108 CFAP65Q6ZU64 1925 aaKnown RBP16.27■□□□□ 0.2
CTCFL-214ENST00000608108 ANKRD30BQ9BXX2 1392 aa16.27■□□□□ 0.19
CTCFL-214ENST00000608108 SPHKAPQ2M3C7 1700 aa16.27■□□□□ 0.19
CTCFL-214ENST00000608108 FER1L4A9Z1Z3 1794 aa16.27■□□□□ 0.19
CTCFL-214ENST00000608108 RPRD2Q5VT52 1461 aaKnown RBP16.26■□□□□ 0.19
CTCFL-214ENST00000608108 NPATQ14207 1427 aa16.24■□□□□ 0.19
CTCFL-214ENST00000608108 ESF1Q9H501 851 aaKnown RBP16.23■□□□□ 0.19
CTCFL-214ENST00000608108 ARHGAP31Q2M1Z3 1444 aa16.23■□□□□ 0.19
CTCFL-214ENST00000608108 MROH2AA6NES4 1674 aa16.23■□□□□ 0.19
CTCFL-214ENST00000608108 SIN3AQ96ST3 1273 aa16.22■□□□□ 0.19
CTCFL-214ENST00000608108 CNTLNQ9NXG0 1405 aa16.22■□□□□ 0.19
CTCFL-214ENST00000608108 PLA2R1Q13018 1463 aa16.22■□□□□ 0.19
CTCFL-214ENST00000608108 TRPM2O94759 1503 aa16.22■□□□□ 0.19
CTCFL-214ENST00000608108 PTPRTO14522 1441 aa16.21■□□□□ 0.19
CTCFL-214ENST00000608108 PREX1Q8TCU6 1659 aa16.2■□□□□ 0.18
CTCFL-214ENST00000608108 MADDQ8WXG6 1647 aa16.2■□□□□ 0.18
CTCFL-214ENST00000608108 NEUROD1Q13562 356 aa16.19■□□□□ 0.18
CTCFL-214ENST00000608108 ADAMTSL3P82987 1691 aa16.19■□□□□ 0.18
CTCFL-214ENST00000608108 CCDC144AA2RUR9 1427 aa16.19■□□□□ 0.18
CTCFL-214ENST00000608108 RIMS1Q86UR5 1692 aaKnown RBP16.18■□□□□ 0.18
CTCFL-214ENST00000608108 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
CTCFL-214ENST00000608108 CLTCL1P53675 1640 aa16.17■□□□□ 0.18
CTCFL-214ENST00000608108 ZMYM3Q14202 1370 aa16.17■□□□□ 0.18
CTCFL-214ENST00000608108 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
CTCFL-214ENST00000608108 C3P01024 1663 aa16.16■□□□□ 0.18
CTCFL-214ENST00000608108 NOS1P29475 1434 aa16.16■□□□□ 0.18
CTCFL-214ENST00000608108 SYNMO15061 1565 aa16.16■□□□□ 0.18
CTCFL-214ENST00000608108 ERVK-7P63135 1459 aa16.16■□□□□ 0.18
CTCFL-214ENST00000608108 UGGT1Q9NYU2 1555 aa16.15■□□□□ 0.18
CTCFL-214ENST00000608108 SPATA31D1Q6ZQQ2 1576 aa16.15■□□□□ 0.18
CTCFL-214ENST00000608108 KIF1BO60333 1816 aa16.13■□□□□ 0.17
CTCFL-214ENST00000608108 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
CTCFL-214ENST00000608108 PIK3C2BO00750 1634 aa16.13■□□□□ 0.17
CTCFL-214ENST00000608108 FBXO31Q5XUX0 539 aaPredicted RBP16.12■□□□□ 0.17
CTCFL-214ENST00000608108 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.17
CTCFL-214ENST00000608108 TIMELESSQ9UNS1 1208 aa16.08■□□□□ 0.17
CTCFL-214ENST00000608108 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.16
CTCFL-214ENST00000608108 NEURL4Q96JN8 1562 aa16.07■□□□□ 0.16
CTCFL-214ENST00000608108 SPATA31E1Q6ZUB1 1445 aa16.07■□□□□ 0.16
CTCFL-214ENST00000608108 SLC52A1Q9NWF4 448 aa16.07■□□□□ 0.16
CTCFL-214ENST00000608108 ADGRB3O60242 1522 aa16.07■□□□□ 0.16
CTCFL-214ENST00000608108 TNRQ92752 1358 aa16.06■□□□□ 0.16
CTCFL-214ENST00000608108 MYO5BQ9ULV0 1848 aa16.06■□□□□ 0.16
CTCFL-214ENST00000608108 L3MBTL2Q969R5 705 aa16.05■□□□□ 0.16
CTCFL-214ENST00000608108 PTPRMP28827 1452 aa16.04■□□□□ 0.16
CTCFL-214ENST00000608108 IDI1Q13907 227 aa16.04■□□□□ 0.16
CTCFL-214ENST00000608108 TMEM131LA2VDJ0 1609 aa16.03■□□□□ 0.16
CTCFL-214ENST00000608108 RGL3Q3MIN7 710 aa16.03■□□□□ 0.16
CTCFL-214ENST00000608108 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.16
CTCFL-214ENST00000608108 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.16
CTCFL-214ENST00000608108 NLRP1Q9C000 1473 aa16.01■□□□□ 0.15
CTCFL-214ENST00000608108 IFT172Q9UG01 1749 aa16.01■□□□□ 0.15
CTCFL-214ENST00000608108 SETD1BQ9UPS6 1966 aaKnown RBP16.01■□□□□ 0.15
CTCFL-214ENST00000608108 KDM5AP29375 1690 aaKnown RBP16■□□□□ 0.15
CTCFL-214ENST00000608108 PPLO60437 1756 aa15.99■□□□□ 0.15
CTCFL-214ENST00000608108 UBR1Q8IWV7 1749 aa15.99■□□□□ 0.15
CTCFL-214ENST00000608108 PPP1R15AO75807 674 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms