RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 MROH1Q8NDA8 1641 aa21.77■■□□□ 1.08
TUBE1-211ENST00000605457 FAM135AQ9P2D6 1515 aa21.77■■□□□ 1.07
TUBE1-211ENST00000605457 GGT6Q6P531 493 aa21.77■■□□□ 1.07
TUBE1-211ENST00000605457 RRP7BPQ9NSQ0 103 aa21.77■■□□□ 1.07
TUBE1-211ENST00000605457 DEPDC5O75140 1603 aa21.75■■□□□ 1.07
TUBE1-211ENST00000605457 ESF1Q9H501 851 aaKnown RBP21.73■■□□□ 1.07
TUBE1-211ENST00000605457 KDM5DQ9BY66 1539 aa21.73■■□□□ 1.07
TUBE1-211ENST00000605457 ZC3H13Q5T200 1668 aaKnown RBP21.73■■□□□ 1.07
TUBE1-211ENST00000605457 PPP6R1Q9UPN7 881 aa21.73■■□□□ 1.07
TUBE1-211ENST00000605457 SETD1BQ9UPS6 1966 aaKnown RBP21.72■■□□□ 1.07
TUBE1-211ENST00000605457 ROCK1Q13464 1354 aa21.72■■□□□ 1.07
TUBE1-211ENST00000605457 PRDM15P57071 1507 aaPredicted RBP21.71■■□□□ 1.07
TUBE1-211ENST00000605457 CEP152O94986 1710 aa21.7■■□□□ 1.06
TUBE1-211ENST00000605457 ITGAEP38570 1179 aa21.69■■□□□ 1.06
TUBE1-211ENST00000605457 CEBPAP49715 358 aaPredicted RBP21.69■■□□□ 1.06
TUBE1-211ENST00000605457 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
TUBE1-211ENST00000605457 PREX1Q8TCU6 1659 aa21.69■■□□□ 1.06
TUBE1-211ENST00000605457 ZMYM3Q14202 1370 aa21.67■■□□□ 1.06
TUBE1-211ENST00000605457 ABCC3O15438 1527 aa21.67■■□□□ 1.06
TUBE1-211ENST00000605457 ANKRD50Q9ULJ7 1429 aa21.66■■□□□ 1.06
TUBE1-211ENST00000605457 CAMSAP1Q5T5Y3 1602 aa21.64■■□□□ 1.05
TUBE1-211ENST00000605457 LMTK3Q96Q04 1460 aa21.64■■□□□ 1.05
TUBE1-211ENST00000605457 GCC2Q8IWJ2 1684 aa21.63■■□□□ 1.05
TUBE1-211ENST00000605457 WASHC2CQ9Y4E1 1318 aa21.63■■□□□ 1.05
TUBE1-211ENST00000605457 VWDEQ8N2E2 1590 aa21.63■■□□□ 1.05
TUBE1-211ENST00000605457 NPATQ14207 1427 aa21.62■■□□□ 1.05
TUBE1-211ENST00000605457 UNC13BO14795 1591 aa21.61■■□□□ 1.05
TUBE1-211ENST00000605457 PZPP20742 1482 aa21.6■■□□□ 1.05
TUBE1-211ENST00000605457 CFAP65Q6ZU64 1925 aaKnown RBP21.59■■□□□ 1.05
TUBE1-211ENST00000605457 MYO3AQ8NEV4 1616 aa21.58■■□□□ 1.04
TUBE1-211ENST00000605457 LMTK2Q8IWU2 1503 aa21.57■■□□□ 1.04
TUBE1-211ENST00000605457 KANK1Q14678 1352 aa21.56■■□□□ 1.04
TUBE1-211ENST00000605457 ZNF142P52746 1687 aaPredicted RBP21.55■■□□□ 1.04
TUBE1-211ENST00000605457 UHRF1BP1Q6BDS2 1440 aa21.55■■□□□ 1.04
TUBE1-211ENST00000605457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.55■■□□□ 1.04
TUBE1-211ENST00000605457 NAIPQ13075 1403 aa21.55■■□□□ 1.04
TUBE1-211ENST00000605457 HFM1A2PYH4 1435 aa21.54■■□□□ 1.04
TUBE1-211ENST00000605457 EFCAB6Q5THR3 1501 aa21.52■■□□□ 1.04
TUBE1-211ENST00000605457 IQGAP3Q86VI3 1631 aa21.52■■□□□ 1.04
TUBE1-211ENST00000605457 SPATA31D1Q6ZQQ2 1576 aa21.52■■□□□ 1.04
TUBE1-211ENST00000605457 TET3O43151 1660 aa21.52■■□□□ 1.04
TUBE1-211ENST00000605457 ARHGAP31Q2M1Z3 1444 aa21.52■■□□□ 1.04
TUBE1-211ENST00000605457 FBXO31Q5XUX0 539 aaPredicted RBP21.5■■□□□ 1.03
TUBE1-211ENST00000605457 CEP170BQ9Y4F5 1589 aaPredicted RBP21.49■■□□□ 1.03
TUBE1-211ENST00000605457 ERVK-7P63135 1459 aa21.49■■□□□ 1.03
TUBE1-211ENST00000605457 TNRQ92752 1358 aa21.48■■□□□ 1.03
TUBE1-211ENST00000605457 HSPA2P54652 639 aa21.45■■□□□ 1.02
TUBE1-211ENST00000605457 E9PCH4 1651 aa21.45■■□□□ 1.02
TUBE1-211ENST00000605457 A2ML1A8K2U0 1454 aa21.43■■□□□ 1.02
TUBE1-211ENST00000605457 RPRD2Q5VT52 1461 aaKnown RBP21.43■■□□□ 1.02
TUBE1-211ENST00000605457 NLRP1Q9C000 1473 aa21.43■■□□□ 1.02
TUBE1-211ENST00000605457 STRCQ7RTU9 1775 aa21.42■■□□□ 1.02
TUBE1-211ENST00000605457 NUP155O75694 1391 aa21.42■■□□□ 1.02
TUBE1-211ENST00000605457 SYNMO15061 1565 aa21.41■■□□□ 1.02
TUBE1-211ENST00000605457 NOS1P29475 1434 aa21.38■■□□□ 1.01
TUBE1-211ENST00000605457 UBR1Q8IWV7 1749 aa21.37■■□□□ 1.01
TUBE1-211ENST00000605457 UGGT1Q9NYU2 1555 aa21.36■■□□□ 1.01
TUBE1-211ENST00000605457 PIK3C2BO00750 1634 aa21.35■■□□□ 1.01
TUBE1-211ENST00000605457 PLA2R1Q13018 1463 aa21.34■■□□□ 1.01
TUBE1-211ENST00000605457 KDM5AP29375 1690 aaKnown RBP21.34■■□□□ 1.01
TUBE1-211ENST00000605457 POLR1AO95602 1720 aaPredicted RBP21.34■■□□□ 1.01
TUBE1-211ENST00000605457 SPHKAPQ2M3C7 1700 aa21.34■■□□□ 1.01
TUBE1-211ENST00000605457 SETD5Q9C0A6 1442 aa21.32■■□□□ 1
TUBE1-211ENST00000605457 MYO5BQ9ULV0 1848 aa21.29■■□□□ 1
TUBE1-211ENST00000605457 TRIM52Q96A61 297 aa21.27■■□□□ 1
TUBE1-211ENST00000605457 ADGRB3O60242 1522 aa21.27■■□□□ 1
TUBE1-211ENST00000605457 RAB3GAP2Q9H2M9 1393 aa21.26■□□□□ 0.99
TUBE1-211ENST00000605457 IDI1Q13907 227 aa21.25■□□□□ 0.99
TUBE1-211ENST00000605457 THEMISQ8N1K5 641 aaPredicted RBP21.25■□□□□ 0.99
TUBE1-211ENST00000605457 NEURL4Q96JN8 1562 aa21.25■□□□□ 0.99
TUBE1-211ENST00000605457 SLC52A1Q9NWF4 448 aa21.24■□□□□ 0.99
TUBE1-211ENST00000605457 PTPRTO14522 1441 aa21.24■□□□□ 0.99
TUBE1-211ENST00000605457 SLIT1O75093 1534 aa21.23■□□□□ 0.99
TUBE1-211ENST00000605457 TMEM131LA2VDJ0 1609 aa21.23■□□□□ 0.99
TUBE1-211ENST00000605457 TRPM2O94759 1503 aa21.22■□□□□ 0.99
TUBE1-211ENST00000605457 ARHGAP23Q9P227 1491 aa21.21■□□□□ 0.99
TUBE1-211ENST00000605457 PKD2Q13563 968 aa21.21■□□□□ 0.99
TUBE1-211ENST00000605457 SLC4A1APQ9BWU0 796 aaKnown RBP21.21■□□□□ 0.99
TUBE1-211ENST00000605457 NCKAP5LQ9HCH0 1330 aa21.21■□□□□ 0.99
TUBE1-211ENST00000605457 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
TUBE1-211ENST00000605457 CLTCL1P53675 1640 aa21.2■□□□□ 0.98
TUBE1-211ENST00000605457 DMRT2Q9Y5R5 561 aa21.19■□□□□ 0.98
TUBE1-211ENST00000605457 IQGAP1P46940 1657 aa21.17■□□□□ 0.98
TUBE1-211ENST00000605457 KIF1BO60333 1816 aa21.17■□□□□ 0.98
TUBE1-211ENST00000605457 MED14O60244 1454 aa21.17■□□□□ 0.98
TUBE1-211ENST00000605457 STAG3Q9UJ98 1225 aa21.16■□□□□ 0.98
TUBE1-211ENST00000605457 TMEM2Q9UHN6 1383 aa21.16■□□□□ 0.98
TUBE1-211ENST00000605457 SCAF11Q99590 1463 aaKnown RBP21.15■□□□□ 0.98
TUBE1-211ENST00000605457 ANKLE2Q86XL3 938 aa21.15■□□□□ 0.98
TUBE1-211ENST00000605457 MPHOSPH9Q99550 1183 aa21.15■□□□□ 0.98
TUBE1-211ENST00000605457 HRCP23327 699 aa21.13■□□□□ 0.97
TUBE1-211ENST00000605457 NPHP4O75161 1426 aaPredicted RBP21.12■□□□□ 0.97
TUBE1-211ENST00000605457 ZFYVE9O95405 1425 aa21.1■□□□□ 0.97
TUBE1-211ENST00000605457 LTKP29376 864 aa21.1■□□□□ 0.97
TUBE1-211ENST00000605457 FOXD1Q16676 465 aa21.1■□□□□ 0.97
TUBE1-211ENST00000605457 TXNDC2Q86VQ3 553 aa21.07■□□□□ 0.96
TUBE1-211ENST00000605457 CHGAP10645 457 aaKnown RBP21.07■□□□□ 0.96
TUBE1-211ENST00000605457 EID1Q9Y6B2 187 aa21.07■□□□□ 0.96
TUBE1-211ENST00000605457 RIMS2Q9UQ26 1411 aa21.06■□□□□ 0.96
TUBE1-211ENST00000605457 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms