RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 LTBP4Q8N2S1 1624 aa29.68■■■□□ 2.34
SRSF4-206ENST00000605204 DNMT1P26358 1616 aaKnown RBP29.67■■■□□ 2.34
SRSF4-206ENST00000605204 CAMSAP1Q5T5Y3 1602 aa29.67■■■□□ 2.34
SRSF4-206ENST00000605204 FAM135AQ9P2D6 1515 aa29.67■■■□□ 2.34
SRSF4-206ENST00000605204 DAPK1P53355 1430 aa29.67■■■□□ 2.34
SRSF4-206ENST00000605204 CROCC2H7BZ55 1655 aa29.64■■■□□ 2.34
SRSF4-206ENST00000605204 GGT6Q6P531 493 aa29.63■■■□□ 2.33
SRSF4-206ENST00000605204 KIF3BO15066 747 aa29.61■■■□□ 2.33
SRSF4-206ENST00000605204 DUOX2Q9NRD8 1548 aa29.61■■■□□ 2.33
SRSF4-206ENST00000605204 CEP170BQ9Y4F5 1589 aaPredicted RBP29.61■■■□□ 2.33
SRSF4-206ENST00000605204 ZMYM3Q14202 1370 aa29.6■■■□□ 2.33
SRSF4-206ENST00000605204 DMRT2Q9Y5R5 561 aa29.6■■■□□ 2.33
SRSF4-206ENST00000605204 EIF2AK4Q9P2K8 1649 aaKnown RBP29.58■■■□□ 2.33
SRSF4-206ENST00000605204 KIF15Q9NS87 1388 aa29.58■■■□□ 2.33
SRSF4-206ENST00000605204 PTPRKQ15262 1439 aa29.58■■■□□ 2.33
SRSF4-206ENST00000605204 FAM50AQ14320 339 aaKnown RBP29.56■■■□□ 2.32
SRSF4-206ENST00000605204 ANKRD30AQ9BXX3 1397 aa29.56■■■□□ 2.32
SRSF4-206ENST00000605204 ERBINQ96RT1 1412 aa29.55■■■□□ 2.32
SRSF4-206ENST00000605204 KDM5DQ9BY66 1539 aa29.54■■■□□ 2.32
SRSF4-206ENST00000605204 RNF17Q9BXT8 1623 aaKnown RBP29.52■■■□□ 2.32
SRSF4-206ENST00000605204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.52■■■□□ 2.322e-23■□□□□ 10.7
SRSF4-206ENST00000605204 ADGRL2O95490 1459 aa29.51■■■□□ 2.32
SRSF4-206ENST00000605204 PLA2R1Q13018 1463 aa29.5■■■□□ 2.31
SRSF4-206ENST00000605204 IQSEC2Q5JU85 1478 aa29.47■■■□□ 2.31
SRSF4-206ENST00000605204 WASHC2CQ9Y4E1 1318 aa29.47■■■□□ 2.31
SRSF4-206ENST00000605204 RRP7BPQ9NSQ0 103 aa29.47■■■□□ 2.31
SRSF4-206ENST00000605204 NCKAP5LQ9HCH0 1330 aa29.44■■■□□ 2.3
SRSF4-206ENST00000605204 ZC3H13Q5T200 1668 aaKnown RBP29.43■■■□□ 2.3
SRSF4-206ENST00000605204 CHIC2Q9UKJ5 165 aa29.41■■■□□ 2.3
SRSF4-206ENST00000605204 SPATA31D1Q6ZQQ2 1576 aa29.41■■■□□ 2.3
SRSF4-206ENST00000605204 PZPP20742 1482 aa29.41■■■□□ 2.3
SRSF4-206ENST00000605204 POLR1AO95602 1720 aaPredicted RBP29.4■■■□□ 2.3
SRSF4-206ENST00000605204 PRDM15P57071 1507 aaPredicted RBP29.4■■■□□ 2.3
SRSF4-206ENST00000605204 PPARGC1BQ86YN6 1023 aaKnown RBP29.39■■■□□ 2.3
SRSF4-206ENST00000605204 A2ML1A8K2U0 1454 aa29.39■■■□□ 2.3
SRSF4-206ENST00000605204 ROCK1Q13464 1354 aa29.39■■■□□ 2.3
SRSF4-206ENST00000605204 ZNF335Q9H4Z2 1342 aaPredicted RBP29.38■■■□□ 2.29
SRSF4-206ENST00000605204 ABCC3O15438 1527 aa29.38■■■□□ 2.29
SRSF4-206ENST00000605204 NEURL4Q96JN8 1562 aa29.38■■■□□ 2.29
SRSF4-206ENST00000605204 MROH1Q8NDA8 1641 aa29.38■■■□□ 2.29
SRSF4-206ENST00000605204 RRBP1Q9P2E9 1410 aaKnown RBP29.37■■■□□ 2.29
SRSF4-206ENST00000605204 DEPDC5O75140 1603 aa29.34■■■□□ 2.29
SRSF4-206ENST00000605204 KANK1Q14678 1352 aa29.34■■■□□ 2.29
SRSF4-206ENST00000605204 ANKRD50Q9ULJ7 1429 aa29.33■■■□□ 2.29
SRSF4-206ENST00000605204 DISP3Q9P2K9 1392 aa29.32■■■□□ 2.28
SRSF4-206ENST00000605204 TNRQ92752 1358 aa29.29■■■□□ 2.28
SRSF4-206ENST00000605204 PKD2Q13563 968 aa29.27■■■□□ 2.28
SRSF4-206ENST00000605204 ARHGAP31Q2M1Z3 1444 aa29.27■■■□□ 2.28
SRSF4-206ENST00000605204 FBXO31Q5XUX0 539 aaPredicted RBP29.26■■■□□ 2.27
SRSF4-206ENST00000605204 ILDR2Q71H61 639 aa29.26■■■□□ 2.27
SRSF4-206ENST00000605204 LMTK2Q8IWU2 1503 aa29.25■■■□□ 2.27
SRSF4-206ENST00000605204 NLRP1Q9C000 1473 aa29.23■■■□□ 2.27
SRSF4-206ENST00000605204 VWDEQ8N2E2 1590 aa29.23■■■□□ 2.27
SRSF4-206ENST00000605204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.21■■■□□ 2.274e-7■□□□□ 11.3
SRSF4-206ENST00000605204 ERVK-7P63135 1459 aa29.2■■■□□ 2.27
SRSF4-206ENST00000605204 CEP152O94986 1710 aa29.2■■■□□ 2.26
SRSF4-206ENST00000605204 ITGAEP38570 1179 aa29.19■■■□□ 2.26
SRSF4-206ENST00000605204 UGGT1Q9NYU2 1555 aa29.16■■■□□ 2.26
SRSF4-206ENST00000605204 UNC13BO14795 1591 aa29.13■■■□□ 2.25
SRSF4-206ENST00000605204 EFCAB6Q5THR3 1501 aa29.13■■■□□ 2.25
SRSF4-206ENST00000605204 UBAP1LF5GYI3 381 aa29.13■■■□□ 2.25
SRSF4-206ENST00000605204 CPS1P31327 1500 aa29.12■■■□□ 2.25
SRSF4-206ENST00000605204 IQGAP1P46940 1657 aa29.12■■■□□ 2.25
SRSF4-206ENST00000605204 RPRD2Q5VT52 1461 aaKnown RBP29.11■■■□□ 2.25
SRSF4-206ENST00000605204 STRCP1A6NGW2 1772 aa29.07■■■□□ 2.24
SRSF4-206ENST00000605204 ALKQ9UM73 1620 aa29.07■■■□□ 2.24
SRSF4-206ENST00000605204 MED14O60244 1454 aa29.07■■■□□ 2.24
SRSF4-206ENST00000605204 THEMISQ8N1K5 641 aaPredicted RBP29.07■■■□□ 2.24
SRSF4-206ENST00000605204 NPHP4O75161 1426 aaPredicted RBP29.05■■■□□ 2.24
SRSF4-206ENST00000605204 UBR1Q8IWV7 1749 aa29.05■■■□□ 2.24
SRSF4-206ENST00000605204 TET3O43151 1660 aa29.04■■■□□ 2.24
SRSF4-206ENST00000605204 HFM1A2PYH4 1435 aa29.02■■■□□ 2.24
SRSF4-206ENST00000605204 NOS1P29475 1434 aa29.01■■■□□ 2.24
SRSF4-206ENST00000605204 NAIPQ13075 1403 aa29.01■■■□□ 2.24
SRSF4-206ENST00000605204 IQGAP3Q86VI3 1631 aa29.01■■■□□ 2.23
SRSF4-206ENST00000605204 CFAP65Q6ZU64 1925 aaKnown RBP29■■■□□ 2.23
SRSF4-206ENST00000605204 SOCS7O14512 581 aa29■■■□□ 2.23
SRSF4-206ENST00000605204 NUP155O75694 1391 aa28.99■■■□□ 2.23
SRSF4-206ENST00000605204 GCC2Q8IWJ2 1684 aa28.98■■■□□ 2.23
SRSF4-206ENST00000605204 SYNMO15061 1565 aa28.98■■■□□ 2.23
SRSF4-206ENST00000605204 MED1Q15648 1581 aaPredicted RBP28.96■■■□□ 2.23
SRSF4-206ENST00000605204 ANKLE2Q86XL3 938 aa28.96■■■□□ 2.23
SRSF4-206ENST00000605204 SLC52A1Q9NWF4 448 aa28.96■■■□□ 2.23
SRSF4-206ENST00000605204 KDM5AP29375 1690 aaKnown RBP28.93■■■□□ 2.22
SRSF4-206ENST00000605204 PIK3C2BO00750 1634 aa28.9■■■□□ 2.22
SRSF4-206ENST00000605204 LRRC7Q96NW7 1537 aa28.89■■■□□ 2.22
SRSF4-206ENST00000605204 HSPA1LP34931 641 aa28.89■■■□□ 2.22
SRSF4-206ENST00000605204 PIP4K2BP78356 416 aa28.89■■■□□ 2.22
SRSF4-206ENST00000605204 SCAF1Q9H7N4 1312 aaKnown RBP28.89■■■□□ 2.22
SRSF4-206ENST00000605204 ARHGAP23Q9P227 1491 aa28.89■■■□□ 2.21
SRSF4-206ENST00000605204 SCAF11Q99590 1463 aaKnown RBP28.88■■■□□ 2.21
SRSF4-206ENST00000605204 SLIT1O75093 1534 aa28.88■■■□□ 2.21
SRSF4-206ENST00000605204 STAG3Q9UJ98 1225 aa28.88■■■□□ 2.21
SRSF4-206ENST00000605204 IDI1Q13907 227 aa28.87■■■□□ 2.21
SRSF4-206ENST00000605204 ACIN1Q9UKV3 1341 aaKnown RBP28.86■■■□□ 2.21
SRSF4-206ENST00000605204 E9PCH4 1651 aa28.84■■■□□ 2.21
SRSF4-206ENST00000605204 ADGRB3O60242 1522 aa28.84■■■□□ 2.21
SRSF4-206ENST00000605204 XIRP1Q702N8 1843 aaKnown RBP28.83■■■□□ 2.21
SRSF4-206ENST00000605204 TMEM2Q9UHN6 1383 aa28.82■■■□□ 2.2
SRSF4-206ENST00000605204 EID1Q9Y6B2 187 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms