RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 C1orf115Q9H7X2 142 aa8.82□□□□□ -1
TUBE1-209ENST00000604814 PSDA5PKW4 1024 aaPredicted RBP8.81□□□□□ -1
TUBE1-209ENST00000604814 PDIA6Q15084 440 aa8.81□□□□□ -1
TUBE1-209ENST00000604814 ZC3H15Q8WU90 426 aaKnown RBP8.81□□□□□ -1
TUBE1-209ENST00000604814 POTEB3A0JP26 581 aa8.8□□□□□ -1
TUBE1-209ENST00000604814 POTEBQ6S5H4 581 aa8.8□□□□□ -1
TUBE1-209ENST00000604814 ZNF454Q8N9F8 522 aa8.8□□□□□ -1
TUBE1-209ENST00000604814 PPP4R3BQ5MIZ7 849 aa8.78□□□□□ -1
TUBE1-209ENST00000604814 NECTIN2Q92692 538 aa8.78□□□□□ -1
TUBE1-209ENST00000604814 DDX12PQ92771 950 aa8.78□□□□□ -1
TUBE1-209ENST00000604814 FOSBP53539 338 aa8.76□□□□□ -1.01
TUBE1-209ENST00000604814 CDAN1Q8IWY9 1227 aa8.76□□□□□ -1.01
TUBE1-209ENST00000604814 JPH4Q96JJ6 628 aa8.76□□□□□ -1.01
TUBE1-209ENST00000604814 GRXCR2A6NFK2 248 aa8.76□□□□□ -1.01
TUBE1-209ENST00000604814 ZNF687Q8N1G0 1237 aa8.76□□□□□ -1.01
TUBE1-209ENST00000604814 ARID3CA6NKF2 412 aa8.75□□□□□ -1.01
TUBE1-209ENST00000604814 PHF14O94880 888 aa8.75□□□□□ -1.01
TUBE1-209ENST00000604814 PTGER2P43116 358 aa8.75□□□□□ -1.01
TUBE1-209ENST00000604814 ZDHHC16Q969W1 377 aa8.74□□□□□ -1.01
TUBE1-209ENST00000604814 PCDHGA10Q9Y5H3 936 aa8.74□□□□□ -1.01
TUBE1-209ENST00000604814 EIF5BO60841 1220 aaKnown RBP8.73□□□□□ -1.01
TUBE1-209ENST00000604814 SEMA3EO15041 775 aa8.73□□□□□ -1.01
TUBE1-209ENST00000604814 TYW1BQ6NUM6 668 aa8.73□□□□□ -1.01
TUBE1-209ENST00000604814 EPAS1Q99814 870 aa8.73□□□□□ -1.01
TUBE1-209ENST00000604814 APBB1O00213 710 aa8.72□□□□□ -1.01
TUBE1-209ENST00000604814 FBXW7Q969H0 707 aa8.71□□□□□ -1.01
TUBE1-209ENST00000604814 RBM33Q96EV2 1170 aaKnown RBP8.71□□□□□ -1.01
TUBE1-209ENST00000604814 KCNH8Q96L42 1107 aa8.71□□□□□ -1.01
TUBE1-209ENST00000604814 MLLT3P42568 568 aaPredicted RBP8.71□□□□□ -1.02
TUBE1-209ENST00000604814 AXIN2Q9Y2T1 843 aa8.71□□□□□ -1.02
TUBE1-209ENST00000604814 SHROOM4Q9ULL8 1493 aa8.71□□□□□ -1.02
TUBE1-209ENST00000604814 ADAM33Q9BZ11 813 aa8.7□□□□□ -1.02
TUBE1-209ENST00000604814 PBX2P40425 430 aa8.69□□□□□ -1.02
TUBE1-209ENST00000604814 ARHGAP33O14559 1287 aa8.68□□□□□ -1.02
TUBE1-209ENST00000604814 KCNK17Q96T54 332 aa8.68□□□□□ -1.02
TUBE1-209ENST00000604814 BCL2L12Q9HB09 334 aa8.68□□□□□ -1.02
TUBE1-209ENST00000604814 MAP3K7O43318 606 aa8.68□□□□□ -1.02
TUBE1-209ENST00000604814 IGSF3O75054 1194 aa8.68□□□□□ -1.02
TUBE1-209ENST00000604814 PTPREP23469 700 aa8.68□□□□□ -1.02
TUBE1-209ENST00000604814 KCTD17Q8N5Z5 321 aa8.68□□□□□ -1.02
TUBE1-209ENST00000604814 PSEN2P49810 448 aa8.67□□□□□ -1.02
TUBE1-209ENST00000604814 OSBPP22059 807 aa8.66□□□□□ -1.02
TUBE1-209ENST00000604814 SMYD5Q6GMV2 418 aa8.66□□□□□ -1.02
TUBE1-209ENST00000604814 POTEEQ6S8J3 1075 aa8.66□□□□□ -1.02
TUBE1-209ENST00000604814 TESPA1A2RU30 521 aaPredicted RBP8.66□□□□□ -1.02
TUBE1-209ENST00000604814 EN1Q05925 392 aaPredicted RBP8.66□□□□□ -1.02
TUBE1-209ENST00000604814 IL27Q8NEV9 243 aa8.66□□□□□ -1.02
TUBE1-209ENST00000604814 KRTAP3-3Q9BYR6 98 aa8.66□□□□□ -1.02
TUBE1-209ENST00000604814 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
TUBE1-209ENST00000604814 C6orf132Q5T0Z8 1188 aa8.65□□□□□ -1.02
TUBE1-209ENST00000604814 ANKRD13DQ6ZTN6 518 aa8.65□□□□□ -1.02
TUBE1-209ENST00000604814 RAD21O60216 631 aa8.63□□□□□ -1.03
TUBE1-209ENST00000604814 GPBP1L1Q9HC44 474 aaPredicted RBP8.63□□□□□ -1.03
TUBE1-209ENST00000604814 PRIM1P49642 420 aaKnown RBP8.63□□□□□ -1.03
TUBE1-209ENST00000604814 LSM11P83369 360 aaKnown RBP eCLIP8.63□□□□□ -1.03
TUBE1-209ENST00000604814 ZMYND10O75800 440 aa8.62□□□□□ -1.03
TUBE1-209ENST00000604814 TSR1Q2NL82 804 aaKnown RBP8.62□□□□□ -1.03
TUBE1-209ENST00000604814 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
TUBE1-209ENST00000604814 NUTM2FA1L443 756 aa8.6□□□□□ -1.03
TUBE1-209ENST00000604814 PPP1R3GB7ZBB8 358 aa8.6□□□□□ -1.03
TUBE1-209ENST00000604814 COL9A1P20849 921 aa8.6□□□□□ -1.03
TUBE1-209ENST00000604814 HMGB1P09429 215 aaKnown RBP8.59□□□□□ -1.03
TUBE1-209ENST00000604814 CDK11BP21127 795 aaKnown RBP8.58□□□□□ -1.04
TUBE1-209ENST00000604814 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
TUBE1-209ENST00000604814 CCDC82Q8N4S0 544 aa8.58□□□□□ -1.04
TUBE1-209ENST00000604814 CDK11AQ9UQ88 783 aaPredicted RBP8.58□□□□□ -1.04
TUBE1-209ENST00000604814 CDHR5Q9HBB8 845 aa8.58□□□□□ -1.04
TUBE1-209ENST00000604814 ADGRD1Q6QNK2 874 aa8.57□□□□□ -1.04
TUBE1-209ENST00000604814 ZBED2Q9BTP6 218 aa8.57□□□□□ -1.04
TUBE1-209ENST00000604814 TK2O00142 265 aa8.56□□□□□ -1.04
TUBE1-209ENST00000604814 RGS22Q8NE09 1264 aa8.56□□□□□ -1.04
TUBE1-209ENST00000604814 CERKQ8TCT0 537 aa8.56□□□□□ -1.04
TUBE1-209ENST00000604814 STAC3Q96MF2 364 aa8.56□□□□□ -1.04
TUBE1-209ENST00000604814 PROX2Q3B8N5 592 aa8.55□□□□□ -1.04
TUBE1-209ENST00000604814 VPS9D1Q9Y2B5 631 aa8.55□□□□□ -1.04
TUBE1-209ENST00000604814 HSP90B1P14625 803 aaKnown RBP8.54□□□□□ -1.04
TUBE1-209ENST00000604814 SLC4A5Q9BY07 1137 aa8.54□□□□□ -1.04
TUBE1-209ENST00000604814 KDM4CQ9H3R0 1056 aa8.54□□□□□ -1.04
TUBE1-209ENST00000604814 MTMR7Q9Y216 660 aa8.54□□□□□ -1.04
TUBE1-209ENST00000604814 AEBP1Q8IUX7 1158 aa8.53□□□□□ -1.04
TUBE1-209ENST00000604814 PRSS12P56730 875 aa8.52□□□□□ -1.05
TUBE1-209ENST00000604814 BARGINQ6ZT62 677 aa8.52□□□□□ -1.05
TUBE1-209ENST00000604814 GPIHBP1Q8IV16 184 aa8.52□□□□□ -1.05
TUBE1-209ENST00000604814 SPNS2Q8IVW8 549 aa8.52□□□□□ -1.05
TUBE1-209ENST00000604814 CDCA7LQ96GN5 454 aa8.52□□□□□ -1.05
TUBE1-209ENST00000604814 TRAIPQ9BWF2 469 aa8.52□□□□□ -1.05
TUBE1-209ENST00000604814 NPDC1Q9NQX5 325 aaPredicted RBP8.52□□□□□ -1.05
TUBE1-209ENST00000604814 TRIM6-TRIM34B2RNG4 842 aa8.51□□□□□ -1.05
TUBE1-209ENST00000604814 FCHSD2O94868 740 aa8.51□□□□□ -1.05
TUBE1-209ENST00000604814 RBM25P49756 843 aaKnown RBP8.51□□□□□ -1.05
TUBE1-209ENST00000604814 PTGDRQ13258 359 aa8.51□□□□□ -1.05
TUBE1-209ENST00000604814 AK7Q96M32 723 aa8.51□□□□□ -1.05
TUBE1-209ENST00000604814 TMCO4Q5TGY1 634 aa8.5□□□□□ -1.05
TUBE1-209ENST00000604814 KIAA1468Q9P260 1216 aa8.5□□□□□ -1.05
TUBE1-209ENST00000604814 PACS2Q86VP3 889 aa8.5□□□□□ -1.05
TUBE1-209ENST00000604814 RABGEF1Q9UJ41 708 aa8.5□□□□□ -1.05
TUBE1-209ENST00000604814 ONECUT3O60422 494 aaPredicted RBP8.49□□□□□ -1.05
TUBE1-209ENST00000604814 FLIIQ13045 1269 aa8.49□□□□□ -1.05
TUBE1-209ENST00000604814 NBPF3Q9H094 633 aa8.49□□□□□ -1.05
TUBE1-209ENST00000604814 HRO43593 1189 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms