RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 ASXL2Q76L83 1435 aa20.63■□□□□ 0.89
PPFIA3-206ENST00000602655 ABCC2Q92887 1545 aa20.62■□□□□ 0.89
PPFIA3-206ENST00000602655 ABCC10Q5T3U5 1492 aa20.62■□□□□ 0.89
PPFIA3-206ENST00000602655 PLEKHH2Q8IVE3 1493 aa20.62■□□□□ 0.89
PPFIA3-206ENST00000602655 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
PPFIA3-206ENST00000602655 ANKRD30BQ9BXX2 1392 aa20.59■□□□□ 0.89
PPFIA3-206ENST00000602655 NBPF1Q3BBV0 1214 aa20.58■□□□□ 0.89
PPFIA3-206ENST00000602655 TTC37Q6PGP7 1564 aa20.57■□□□□ 0.88
PPFIA3-206ENST00000602655 RSPH4AQ5TD94 716 aa20.57■□□□□ 0.88
PPFIA3-206ENST00000602655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.57■□□□□ 0.88
PPFIA3-206ENST00000602655 ROCK1Q13464 1354 aa20.57■□□□□ 0.88
PPFIA3-206ENST00000602655 DENND4BO75064 1496 aaPredicted RBP20.56■□□□□ 0.88
PPFIA3-206ENST00000602655 FAM9BQ8IZU0 186 aa20.56■□□□□ 0.88
PPFIA3-206ENST00000602655 GLIPR1L2Q4G1C9 344 aa20.54■□□□□ 0.88
PPFIA3-206ENST00000602655 CCDC141Q6ZP82 1450 aa20.54■□□□□ 0.88
PPFIA3-206ENST00000602655 ST20-MTHFSA0A0A6YYL1 179 aa20.54■□□□□ 0.88
PPFIA3-206ENST00000602655 ARHGEF12Q9NZN5 1544 aa20.53■□□□□ 0.88
PPFIA3-206ENST00000602655 VSIG10Q8N0Z9 540 aa20.52■□□□□ 0.88
PPFIA3-206ENST00000602655 MBD5Q9P267 1494 aa20.52■□□□□ 0.88
PPFIA3-206ENST00000602655 WASHC2AQ641Q2 1341 aa20.52■□□□□ 0.88
PPFIA3-206ENST00000602655 PLCH2O75038 1416 aa20.52■□□□□ 0.88
PPFIA3-206ENST00000602655 DNMT1P26358 1616 aaKnown RBP20.51■□□□□ 0.87
PPFIA3-206ENST00000602655 CD109Q6YHK3 1445 aa20.5■□□□□ 0.87
PPFIA3-206ENST00000602655 FANCAO15360 1455 aa20.5■□□□□ 0.87
PPFIA3-206ENST00000602655 ARID4BQ4LE39 1312 aaPredicted RBP20.5■□□□□ 0.87
PPFIA3-206ENST00000602655 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
PPFIA3-206ENST00000602655 WASHC2CQ9Y4E1 1318 aa20.48■□□□□ 0.87
PPFIA3-206ENST00000602655 SAFB2Q14151 953 aaKnown RBP eCLIP20.48■□□□□ 0.87
PPFIA3-206ENST00000602655 KIAA1107Q9UPP5 1409 aa20.48■□□□□ 0.87
PPFIA3-206ENST00000602655 PZPP20742 1482 aa20.48■□□□□ 0.87
PPFIA3-206ENST00000602655 WDR7Q9Y4E6 1490 aa20.47■□□□□ 0.87
PPFIA3-206ENST00000602655 CDC42BPAQ5VT25 1732 aa20.47■□□□□ 0.87
PPFIA3-206ENST00000602655 SAMD9LQ8IVG5 1584 aa20.46■□□□□ 0.87
PPFIA3-206ENST00000602655 ADGRL1O94910 1474 aa20.46■□□□□ 0.87
PPFIA3-206ENST00000602655 CCDC144AA2RUR9 1427 aa20.46■□□□□ 0.87
PPFIA3-206ENST00000602655 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.86
PPFIA3-206ENST00000602655 PLEKHG5O94827 1062 aa20.44■□□□□ 0.86
PPFIA3-206ENST00000602655 CCDC184Q52MB2 194 aa20.44■□□□□ 0.86
PPFIA3-206ENST00000602655 STAG3Q9UJ98 1225 aa20.43■□□□□ 0.86
PPFIA3-206ENST00000602655 KDM5BQ9UGL1 1544 aa20.43■□□□□ 0.86
PPFIA3-206ENST00000602655 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
PPFIA3-206ENST00000602655 ITSN2Q9NZM3 1697 aa20.42■□□□□ 0.86
PPFIA3-206ENST00000602655 PODXL2Q9NZ53 605 aa20.4■□□□□ 0.86
PPFIA3-206ENST00000602655 DAXXQ9UER7 740 aaPredicted RBP20.4■□□□□ 0.86
PPFIA3-206ENST00000602655 ADCY10Q96PN6 1610 aa20.4■□□□□ 0.86
PPFIA3-206ENST00000602655 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
PPFIA3-206ENST00000602655 MRS2Q9HD23 443 aa20.38■□□□□ 0.85
PPFIA3-206ENST00000602655 USP47Q96K76 1375 aa20.38■□□□□ 0.85
PPFIA3-206ENST00000602655 KIF7Q2M1P5 1343 aa20.38■□□□□ 0.85
PPFIA3-206ENST00000602655 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
PPFIA3-206ENST00000602655 CDC42BPBQ9Y5S2 1711 aa20.37■□□□□ 0.85
PPFIA3-206ENST00000602655 PPM1GO15355 546 aaPredicted RBP20.36■□□□□ 0.85
PPFIA3-206ENST00000602655 STK26Q9P289 416 aa20.36■□□□□ 0.85
PPFIA3-206ENST00000602655 CC2D1BQ5T0F9 858 aaKnown RBP20.36■□□□□ 0.85
PPFIA3-206ENST00000602655 TMEM132EQ6IEE7 984 aa20.36■□□□□ 0.85
PPFIA3-206ENST00000602655 RPRD2Q5VT52 1461 aaKnown RBP20.36■□□□□ 0.85
PPFIA3-206ENST00000602655 GSE1Q14687 1217 aa20.35■□□□□ 0.85
PPFIA3-206ENST00000602655 ZMYND15Q9H091 742 aa20.35■□□□□ 0.85
PPFIA3-206ENST00000602655 KANK1Q14678 1352 aa20.34■□□□□ 0.85
PPFIA3-206ENST00000602655 ESF1Q9H501 851 aaKnown RBP20.34■□□□□ 0.85
PPFIA3-206ENST00000602655 CFAP70Q5T0N1 1121 aa20.34■□□□□ 0.85
PPFIA3-206ENST00000602655 FBXO31Q5XUX0 539 aaPredicted RBP20.34■□□□□ 0.85
PPFIA3-206ENST00000602655 USP35Q9P2H5 1018 aa20.33■□□□□ 0.85
PPFIA3-206ENST00000602655 CFAP65Q6ZU64 1925 aaKnown RBP20.32■□□□□ 0.84
PPFIA3-206ENST00000602655 TRAK1Q9UPV9 953 aa20.31■□□□□ 0.84
PPFIA3-206ENST00000602655 GCC2Q8IWJ2 1684 aa20.28■□□□□ 0.84
PPFIA3-206ENST00000602655 ADGRL2O95490 1459 aa20.28■□□□□ 0.84
PPFIA3-206ENST00000602655 FAM135AQ9P2D6 1515 aa20.27■□□□□ 0.84
PPFIA3-206ENST00000602655 TMC1Q8TDI8 760 aa20.27■□□□□ 0.84
PPFIA3-206ENST00000602655 UHRF1BP1LA0JNW5 1464 aa20.27■□□□□ 0.83
PPFIA3-206ENST00000602655 FRAT1Q92837 279 aaPredicted RBP20.26■□□□□ 0.83
PPFIA3-206ENST00000602655 PREX2Q70Z35 1606 aa20.26■□□□□ 0.83
PPFIA3-206ENST00000602655 TNNT2P45379 298 aaPredicted RBP20.26■□□□□ 0.83
PPFIA3-206ENST00000602655 ARXQ96QS3 562 aa20.26■□□□□ 0.83
PPFIA3-206ENST00000602655 CCDC7Q96M83 1385 aa20.25■□□□□ 0.83
PPFIA3-206ENST00000602655 MYO5CQ9NQX4 1742 aa20.23■□□□□ 0.83
PPFIA3-206ENST00000602655 SLC4A3P48751 1232 aa20.23■□□□□ 0.83
PPFIA3-206ENST00000602655 ADGRF5Q8IZF2 1346 aa20.22■□□□□ 0.83
PPFIA3-206ENST00000602655 NAP1L5Q96NT1 182 aaPredicted RBP20.22■□□□□ 0.83
PPFIA3-206ENST00000602655 DHX29Q7Z478 1369 aaKnown RBP20.2■□□□□ 0.82
PPFIA3-206ENST00000602655 TEX14Q8IWB6 1497 aa20.2■□□□□ 0.82
PPFIA3-206ENST00000602655 CEBPAP49715 358 aaPredicted RBP20.19■□□□□ 0.82
PPFIA3-206ENST00000602655 PRKRIP1Q9H875 184 aaPredicted RBP20.19■□□□□ 0.82
PPFIA3-206ENST00000602655 SHANK2Q9UPX8 1470 aa20.19■□□□□ 0.82
PPFIA3-206ENST00000602655 YEATS2Q9ULM3 1422 aa20.19■□□□□ 0.82
PPFIA3-206ENST00000602655 PLA2R1Q13018 1463 aa20.17■□□□□ 0.82
PPFIA3-206ENST00000602655 NFKBIBQ15653 356 aa20.16■□□□□ 0.82
PPFIA3-206ENST00000602655 PANK3Q9H999 370 aa20.16■□□□□ 0.82
PPFIA3-206ENST00000602655 TSPOAP1O95153 1857 aa20.16■□□□□ 0.82
PPFIA3-206ENST00000602655 IDI1Q13907 227 aa20.15■□□□□ 0.82
PPFIA3-206ENST00000602655 ABCC1P33527 1531 aa20.15■□□□□ 0.82
PPFIA3-206ENST00000602655 A0A0U1RQG5 324 aaPredicted RBP20.15■□□□□ 0.82
PPFIA3-206ENST00000602655 HSP90AA2PQ14568 343 aaPredicted RBP20.15■□□□□ 0.82
PPFIA3-206ENST00000602655 UGGT1Q9NYU2 1555 aa20.15■□□□□ 0.82
PPFIA3-206ENST00000602655 NUTM2FA1L443 756 aa20.14■□□□□ 0.81
PPFIA3-206ENST00000602655 PDE4AP27815 886 aa20.14■□□□□ 0.81
PPFIA3-206ENST00000602655 DUOX2Q9NRD8 1548 aa20.12■□□□□ 0.81
PPFIA3-206ENST00000602655 ARHGEF5Q12774 1597 aa20.12■□□□□ 0.81
PPFIA3-206ENST00000602655 ADGBQ8N7X0 1667 aa20.12■□□□□ 0.81
PPFIA3-206ENST00000602655 A2MP01023 1474 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms