RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 MLECQ14165 292 aa15.11■□□□□ 0.01
UPF1-213ENST00000601981 MADDQ8WXG6 1647 aa15.1■□□□□ 0.01
UPF1-213ENST00000601981 ANKRD50Q9ULJ7 1429 aa15.1■□□□□ 0.01
UPF1-213ENST00000601981 FAM135AQ9P2D6 1515 aa15.1■□□□□ 0.01
UPF1-213ENST00000601981 RIMS1Q86UR5 1692 aaKnown RBP15.09■□□□□ 0.01
UPF1-213ENST00000601981 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
UPF1-213ENST00000601981 GGT6Q6P531 493 aa15.08■□□□□ 0
UPF1-213ENST00000601981 ZC3H13Q5T200 1668 aaKnown RBP15.08■□□□□ 0
UPF1-213ENST00000601981 CNTLNQ9NXG0 1405 aa15.08■□□□□ 0
UPF1-213ENST00000601981 DEPDC5O75140 1603 aa15.07■□□□□ 0
UPF1-213ENST00000601981 HFM1A2PYH4 1435 aa15.07■□□□□ 0
UPF1-213ENST00000601981 MROH2AA6NES4 1674 aa15.06■□□□□ 0
UPF1-213ENST00000601981 HRCP23327 699 aa15.06■□□□□ 0
UPF1-213ENST00000601981 KANK1Q14678 1352 aa15.06■□□□□ 0
UPF1-213ENST00000601981 CLTCQ00610 1675 aaKnown RBP15.06■□□□□ 0
UPF1-213ENST00000601981 PRDM15P57071 1507 aaPredicted RBP15.05■□□□□ -0
UPF1-213ENST00000601981 KDM5DQ9BY66 1539 aa15.05■□□□□ -0
UPF1-213ENST00000601981 NAIPQ13075 1403 aa15.04■□□□□ -0
UPF1-213ENST00000601981 UNC13BO14795 1591 aa15.03■□□□□ -0
UPF1-213ENST00000601981 CEP152O94986 1710 aa15.03■□□□□ -0
UPF1-213ENST00000601981 MROH1Q8NDA8 1641 aa15.03■□□□□ -0
UPF1-213ENST00000601981 ACIN1Q9UKV3 1341 aaKnown RBP15.02■□□□□ -0
UPF1-213ENST00000601981 WASHC2CQ9Y4E1 1318 aa15.02■□□□□ -0
UPF1-213ENST00000601981 PTPRMP28827 1452 aa15.01□□□□□ -0.01
UPF1-213ENST00000601981 C3P01024 1663 aa15□□□□□ -0.01
UPF1-213ENST00000601981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.013e-7■■■□□ 17.7
UPF1-213ENST00000601981 ABCC3O15438 1527 aa14.99□□□□□ -0.01
UPF1-213ENST00000601981 CAMSAP1Q5T5Y3 1602 aa14.99□□□□□ -0.01
UPF1-213ENST00000601981 IQGAP3Q86VI3 1631 aa14.98□□□□□ -0.01
UPF1-213ENST00000601981 SETD5Q9C0A6 1442 aa14.98□□□□□ -0.01
UPF1-213ENST00000601981 SETD1BQ9UPS6 1966 aaKnown RBP14.98□□□□□ -0.01
UPF1-213ENST00000601981 VWDEQ8N2E2 1590 aa14.97□□□□□ -0.01
UPF1-213ENST00000601981 TET3O43151 1660 aa14.97□□□□□ -0.01
UPF1-213ENST00000601981 LMTK2Q8IWU2 1503 aa14.96□□□□□ -0.02
UPF1-213ENST00000601981 CFAP65Q6ZU64 1925 aaKnown RBP14.96□□□□□ -0.02
UPF1-213ENST00000601981 NUP155O75694 1391 aa14.95□□□□□ -0.02
UPF1-213ENST00000601981 ZMYM3Q14202 1370 aa14.95□□□□□ -0.02
UPF1-213ENST00000601981 EFCAB6Q5THR3 1501 aa14.93□□□□□ -0.02
UPF1-213ENST00000601981 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
UPF1-213ENST00000601981 TRIM52Q96A61 297 aa14.93□□□□□ -0.02
UPF1-213ENST00000601981 PZPP20742 1482 aa14.93□□□□□ -0.02
UPF1-213ENST00000601981 NPATQ14207 1427 aa14.92□□□□□ -0.02
UPF1-213ENST00000601981 ARHGAP31Q2M1Z3 1444 aa14.92□□□□□ -0.02
UPF1-213ENST00000601981 PREX1Q8TCU6 1659 aa14.91□□□□□ -0.02
UPF1-213ENST00000601981 RAB3GAP2Q9H2M9 1393 aa14.91□□□□□ -0.02
UPF1-213ENST00000601981 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
UPF1-213ENST00000601981 RPRD2Q5VT52 1461 aaKnown RBP14.9□□□□□ -0.02
UPF1-213ENST00000601981 CEBPAP49715 358 aaPredicted RBP14.89□□□□□ -0.03
UPF1-213ENST00000601981 E9PCH4 1651 aa14.88□□□□□ -0.03
UPF1-213ENST00000601981 SPATA31D1Q6ZQQ2 1576 aa14.86□□□□□ -0.03
UPF1-213ENST00000601981 MYO3AQ8NEV4 1616 aa14.86□□□□□ -0.03
UPF1-213ENST00000601981 ERVK-7P63135 1459 aa14.86□□□□□ -0.03
UPF1-213ENST00000601981 UHRF1BP1Q6BDS2 1440 aa14.85□□□□□ -0.03
UPF1-213ENST00000601981 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
UPF1-213ENST00000601981 SPHKAPQ2M3C7 1700 aa14.85□□□□□ -0.03
UPF1-213ENST00000601981 TNRQ92752 1358 aa14.85□□□□□ -0.03
UPF1-213ENST00000601981 FBXO41Q8TF61 875 aa14.84□□□□□ -0.03
UPF1-213ENST00000601981 ZNF142P52746 1687 aaPredicted RBP14.84□□□□□ -0.03
UPF1-213ENST00000601981 CCER1Q8TC90 406 aaPredicted RBP14.83□□□□□ -0.04
UPF1-213ENST00000601981 NLRP1Q9C000 1473 aa14.82□□□□□ -0.04
UPF1-213ENST00000601981 FBXO31Q5XUX0 539 aaPredicted RBP14.82□□□□□ -0.04
UPF1-213ENST00000601981 CEP170BQ9Y4F5 1589 aaPredicted RBP14.81□□□□□ -0.04
UPF1-213ENST00000601981 PKD2Q13563 968 aa14.8□□□□□ -0.04
UPF1-213ENST00000601981 MPHOSPH9Q99550 1183 aa14.8□□□□□ -0.04
UPF1-213ENST00000601981 NOS1P29475 1434 aa14.8□□□□□ -0.04
UPF1-213ENST00000601981 SYNMO15061 1565 aa14.79□□□□□ -0.04
UPF1-213ENST00000601981 KDM5AP29375 1690 aaKnown RBP14.78□□□□□ -0.04
UPF1-213ENST00000601981 A2ML1A8K2U0 1454 aa14.78□□□□□ -0.04
UPF1-213ENST00000601981 LMTK3Q96Q04 1460 aa14.78□□□□□ -0.04
UPF1-213ENST00000601981 SLC52A1Q9NWF4 448 aa14.78□□□□□ -0.04
UPF1-213ENST00000601981 KIF1BO60333 1816 aa14.77□□□□□ -0.05
UPF1-213ENST00000601981 TRPM2O94759 1503 aa14.76□□□□□ -0.05
UPF1-213ENST00000601981 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
UPF1-213ENST00000601981 PIK3C2BO00750 1634 aa14.76□□□□□ -0.05
UPF1-213ENST00000601981 UGGT1Q9NYU2 1555 aa14.76□□□□□ -0.05
UPF1-213ENST00000601981 PTPRTO14522 1441 aa14.75□□□□□ -0.05
UPF1-213ENST00000601981 UBR1Q8IWV7 1749 aa14.75□□□□□ -0.05
UPF1-213ENST00000601981 ADGRB3O60242 1522 aa14.73□□□□□ -0.05
UPF1-213ENST00000601981 MYO5BQ9ULV0 1848 aa14.73□□□□□ -0.05
UPF1-213ENST00000601981 CLSPNQ9HAW4 1339 aa14.72□□□□□ -0.05
UPF1-213ENST00000601981 HSPA2P54652 639 aa14.72□□□□□ -0.05
UPF1-213ENST00000601981 THEMISQ8N1K5 641 aaPredicted RBP14.72□□□□□ -0.05
UPF1-213ENST00000601981 DHX57Q6P158 1386 aaKnown RBP14.72□□□□□ -0.05
UPF1-213ENST00000601981 CLTCL1P53675 1640 aa14.71□□□□□ -0.05
UPF1-213ENST00000601981 IDI1Q13907 227 aa14.71□□□□□ -0.05
UPF1-213ENST00000601981 CCDC144AA2RUR9 1427 aa14.71□□□□□ -0.05
UPF1-213ENST00000601981 POLR1AO95602 1720 aaPredicted RBP14.7□□□□□ -0.06
UPF1-213ENST00000601981 PLA2R1Q13018 1463 aa14.69□□□□□ -0.06
UPF1-213ENST00000601981 FOXD1Q16676 465 aa14.69□□□□□ -0.06
UPF1-213ENST00000601981 TMEM131LA2VDJ0 1609 aa14.69□□□□□ -0.06
UPF1-213ENST00000601981 CHGAP10645 457 aaKnown RBP14.68□□□□□ -0.06
UPF1-213ENST00000601981 HDGFP51858 240 aaKnown RBP14.66□□□□□ -0.06
UPF1-213ENST00000601981 EID1Q9Y6B2 187 aa14.65□□□□□ -0.06
UPF1-213ENST00000601981 SLIT1O75093 1534 aa14.65□□□□□ -0.06
UPF1-213ENST00000601981 ANKRD30BQ9BXX2 1392 aa14.64□□□□□ -0.07
UPF1-213ENST00000601981 ANKLE2Q86XL3 938 aa14.64□□□□□ -0.07
UPF1-213ENST00000601981 STRCQ7RTU9 1775 aa14.64□□□□□ -0.07
UPF1-213ENST00000601981 NEURL4Q96JN8 1562 aa14.64□□□□□ -0.07
UPF1-213ENST00000601981 TMEM2Q9UHN6 1383 aa14.63□□□□□ -0.07
UPF1-213ENST00000601981 ZNF326Q5BKZ1 582 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms