RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-221ENST00000601236 ARHGEF5Q12774 1597 aa15.47■□□□□ 0.07
U2AF1L4-221ENST00000601236 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.47■□□□□ 0.07
U2AF1L4-221ENST00000601236 CHIC2Q9UKJ5 165 aa15.47■□□□□ 0.07
U2AF1L4-221ENST00000601236 ANKRD50Q9ULJ7 1429 aa15.47■□□□□ 0.07
U2AF1L4-221ENST00000601236 NUP153P49790 1475 aaKnown RBP15.46■□□□□ 0.07
U2AF1L4-221ENST00000601236 CDK13Q14004 1512 aaKnown RBP15.45■□□□□ 0.06
U2AF1L4-221ENST00000601236 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
U2AF1L4-221ENST00000601236 NBR1Q14596 966 aa15.44■□□□□ 0.06
U2AF1L4-221ENST00000601236 CENPQQ7L2Z9 268 aaPredicted RBP15.44■□□□□ 0.06
U2AF1L4-221ENST00000601236 NINLQ9Y2I6 1382 aa15.44■□□□□ 0.06
U2AF1L4-221ENST00000601236 IFT140Q96RY7 1462 aa15.44■□□□□ 0.06
U2AF1L4-221ENST00000601236 GPATCH8Q9UKJ3 1502 aaKnown RBP15.43■□□□□ 0.06
U2AF1L4-221ENST00000601236 DAXXQ9UER7 740 aaPredicted RBP15.43■□□□□ 0.06
U2AF1L4-221ENST00000601236 NEFMP07197 916 aa15.42■□□□□ 0.06
U2AF1L4-221ENST00000601236 CARD11Q9BXL7 1154 aa15.42■□□□□ 0.06
U2AF1L4-221ENST00000601236 DISP1Q96F81 1524 aa15.42■□□□□ 0.06
U2AF1L4-221ENST00000601236 GSE1Q14687 1217 aa15.41■□□□□ 0.06
U2AF1L4-221ENST00000601236 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
U2AF1L4-221ENST00000601236 CFDP1Q9UEE9 299 aaPredicted RBP15.4■□□□□ 0.06
U2AF1L4-221ENST00000601236 ATP10AO60312 1499 aa15.4■□□□□ 0.06
U2AF1L4-221ENST00000601236 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
U2AF1L4-221ENST00000601236 CARMIL2Q6F5E8 1435 aa15.39■□□□□ 0.05
U2AF1L4-221ENST00000601236 COL17A1Q9UMD9 1497 aaPredicted RBP15.38■□□□□ 0.05
U2AF1L4-221ENST00000601236 PKD2Q13563 968 aa15.37■□□□□ 0.05
U2AF1L4-221ENST00000601236 CDCA8Q53HL2 280 aa15.37■□□□□ 0.05
U2AF1L4-221ENST00000601236 MRC2Q9UBG0 1479 aa15.37■□□□□ 0.05
U2AF1L4-221ENST00000601236 RSPH6AQ9H0K4 717 aa15.36■□□□□ 0.05
U2AF1L4-221ENST00000601236 MAGI1Q96QZ7 1491 aaPredicted RBP15.35■□□□□ 0.05
U2AF1L4-221ENST00000601236 PRDM15P57071 1507 aaPredicted RBP15.35■□□□□ 0.05
U2AF1L4-221ENST00000601236 FAM161AQ3B820 660 aa15.35■□□□□ 0.05
U2AF1L4-221ENST00000601236 MAST1Q9Y2H9 1570 aa15.35■□□□□ 0.05
U2AF1L4-221ENST00000601236 TRPM1Q7Z4N2 1603 aa15.35■□□□□ 0.05
U2AF1L4-221ENST00000601236 C9orf84Q5VXU9 1444 aa15.34■□□□□ 0.05
U2AF1L4-221ENST00000601236 PRAG1Q86YV5 1406 aa15.34■□□□□ 0.05
U2AF1L4-221ENST00000601236 SYNJ2O15056 1496 aa15.33■□□□□ 0.05
U2AF1L4-221ENST00000601236 PRKCSHP14314 528 aaPredicted RBP15.33■□□□□ 0.04
U2AF1L4-221ENST00000601236 NUP155O75694 1391 aa15.33■□□□□ 0.04
U2AF1L4-221ENST00000601236 CCDC141Q6ZP82 1450 aa15.33■□□□□ 0.04
U2AF1L4-221ENST00000601236 TSPY4P0CV99 314 aa15.32■□□□□ 0.04
U2AF1L4-221ENST00000601236 TSPY10P0CW01 314 aa15.32■□□□□ 0.04
U2AF1L4-221ENST00000601236 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
U2AF1L4-221ENST00000601236 EXOC6Q8TAG9 804 aa15.32■□□□□ 0.04
U2AF1L4-221ENST00000601236 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
U2AF1L4-221ENST00000601236 GRIN2AQ12879 1464 aa15.32■□□□□ 0.04
U2AF1L4-221ENST00000601236 PER1O15534 1290 aaPredicted RBP15.31■□□□□ 0.04
U2AF1L4-221ENST00000601236 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
U2AF1L4-221ENST00000601236 ABCC10Q5T3U5 1492 aa15.31■□□□□ 0.04
U2AF1L4-221ENST00000601236 UNC13BO14795 1591 aa15.29■□□□□ 0.04
U2AF1L4-221ENST00000601236 PIK3C2GO75747 1445 aa15.29■□□□□ 0.04
U2AF1L4-221ENST00000601236 MAPK8IP3Q9UPT6 1336 aa15.29■□□□□ 0.04
U2AF1L4-221ENST00000601236 NEURL4Q96JN8 1562 aa15.28■□□□□ 0.04
U2AF1L4-221ENST00000601236 ZNF608Q9ULD9 1512 aaPredicted RBP15.28■□□□□ 0.04
U2AF1L4-221ENST00000601236 SCAPERQ9BY12 1400 aa15.28■□□□□ 0.04
U2AF1L4-221ENST00000601236 ST20-MTHFSA0A0A6YYL1 179 aa15.28■□□□□ 0.04
U2AF1L4-221ENST00000601236 BECN1Q14457 450 aa15.28■□□□□ 0.04
U2AF1L4-221ENST00000601236 FOXD1Q16676 465 aa15.28■□□□□ 0.04
U2AF1L4-221ENST00000601236 L1TD1Q5T7N2 865 aaKnown RBP15.28■□□□□ 0.04
U2AF1L4-221ENST00000601236 TMF1P82094 1093 aa15.27■□□□□ 0.04
U2AF1L4-221ENST00000601236 ISY1Q9ULR0 285 aaKnown RBP15.27■□□□□ 0.04
U2AF1L4-221ENST00000601236 CDC42BPAQ5VT25 1732 aa15.26■□□□□ 0.03
U2AF1L4-221ENST00000601236 NFKBIBQ15653 356 aa15.26■□□□□ 0.03
U2AF1L4-221ENST00000601236 UBE2Q2Q8WVN8 375 aa15.25■□□□□ 0.03
U2AF1L4-221ENST00000601236 ABCC2Q92887 1545 aa15.25■□□□□ 0.03
U2AF1L4-221ENST00000601236 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
U2AF1L4-221ENST00000601236 PLEKHD1A6NEE1 506 aa15.24■□□□□ 0.03
U2AF1L4-221ENST00000601236 RNF17Q9BXT8 1623 aaKnown RBP15.24■□□□□ 0.03
U2AF1L4-221ENST00000601236 PLXNC1O60486 1568 aa15.24■□□□□ 0.03
U2AF1L4-221ENST00000601236 ABCA8O94911 1581 aa15.24■□□□□ 0.03
U2AF1L4-221ENST00000601236 CGNL1Q0VF96 1302 aa15.23■□□□□ 0.03
U2AF1L4-221ENST00000601236 PRG4Q92954 1404 aaPredicted RBP15.23■□□□□ 0.03
U2AF1L4-221ENST00000601236 ERBINQ96RT1 1412 aa15.23■□□□□ 0.03
U2AF1L4-221ENST00000601236 SYNMO15061 1565 aa15.23■□□□□ 0.03
U2AF1L4-221ENST00000601236 IQGAP3Q86VI3 1631 aa15.22■□□□□ 0.03
U2AF1L4-221ENST00000601236 PDE3AQ14432 1141 aa15.22■□□□□ 0.03
U2AF1L4-221ENST00000601236 MAGI2Q86UL8 1455 aa15.21■□□□□ 0.03
U2AF1L4-221ENST00000601236 ZNF521Q96K83 1311 aa15.21■□□□□ 0.03
U2AF1L4-221ENST00000601236 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
U2AF1L4-221ENST00000601236 ZNF644Q9H582 1327 aaPredicted RBP15.19■□□□□ 0.02
U2AF1L4-221ENST00000601236 GLIPR1L2Q4G1C9 344 aa15.19■□□□□ 0.02
U2AF1L4-221ENST00000601236 NPM2Q86SE8 214 aaKnown RBP15.19■□□□□ 0.02
U2AF1L4-221ENST00000601236 TRMT2AQ8IZ69 625 aaKnown RBP15.19■□□□□ 0.02
U2AF1L4-221ENST00000601236 VIRMAQ69YN4 1812 aaKnown RBP15.19■□□□□ 0.02
U2AF1L4-221ENST00000601236 EIF5BO60841 1220 aaKnown RBP15.18■□□□□ 0.02
U2AF1L4-221ENST00000601236 DCAF11Q8TEB1 546 aa15.18■□□□□ 0.02
U2AF1L4-221ENST00000601236 NKTRP30414 1462 aaKnown RBP15.17■□□□□ 0.02
U2AF1L4-221ENST00000601236 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
U2AF1L4-221ENST00000601236 PTMSP20962 102 aa15.17■□□□□ 0.02
U2AF1L4-221ENST00000601236 WDR43Q15061 677 aaKnown RBP eCLIP15.17■□□□□ 0.02
U2AF1L4-221ENST00000601236 CRBNQ96SW2 442 aa15.17■□□□□ 0.02
U2AF1L4-221ENST00000601236 E9PSI1 815 aa15.16■□□□□ 0.02
U2AF1L4-221ENST00000601236 TESK2Q96S53 571 aa15.16■□□□□ 0.02
U2AF1L4-221ENST00000601236 UPF2Q9HAU5 1272 aaKnown RBP15.16■□□□□ 0.02
U2AF1L4-221ENST00000601236 KIAA1210Q9ULL0 1709 aa15.16■□□□□ 0.02
U2AF1L4-221ENST00000601236 PREX2Q70Z35 1606 aa15.16■□□□□ 0.02
U2AF1L4-221ENST00000601236 DUOX2Q9NRD8 1548 aa15.16■□□□□ 0.02
U2AF1L4-221ENST00000601236 DUSP27Q5VZP5 1158 aa15.15■□□□□ 0.02
U2AF1L4-221ENST00000601236 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
U2AF1L4-221ENST00000601236 ASXL1Q8IXJ9 1541 aa15.15■□□□□ 0.02
U2AF1L4-221ENST00000601236 A2MP01023 1474 aa15.14■□□□□ 0.01
U2AF1L4-221ENST00000601236 C8orf34Q49A92 452 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms