RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 GGT6Q6P531 493 aa21.03■□□□□ 0.96
SNRPA-208ENST00000600456 FAM135AQ9P2D6 1515 aa21.02■□□□□ 0.96
SNRPA-208ENST00000600456 RNF17Q9BXT8 1623 aaKnown RBP21■□□□□ 0.95
SNRPA-208ENST00000600456 ITGAEP38570 1179 aa20.99■□□□□ 0.95
SNRPA-208ENST00000600456 ANKRD50Q9ULJ7 1429 aa20.96■□□□□ 0.95
SNRPA-208ENST00000600456 MROH2AA6NES4 1674 aa20.96■□□□□ 0.95
SNRPA-208ENST00000600456 KDM5DQ9BY66 1539 aa20.95■□□□□ 0.94
SNRPA-208ENST00000600456 WASHC2CQ9Y4E1 1318 aa20.93■□□□□ 0.94
SNRPA-208ENST00000600456 ZMYM3Q14202 1370 aa20.93■□□□□ 0.94
SNRPA-208ENST00000600456 PRDM15P57071 1507 aaPredicted RBP20.92■□□□□ 0.94
SNRPA-208ENST00000600456 MROH1Q8NDA8 1641 aa20.92■□□□□ 0.94
SNRPA-208ENST00000600456 CLTCQ00610 1675 aaKnown RBP20.92■□□□□ 0.94
SNRPA-208ENST00000600456 DEPDC5O75140 1603 aa20.91■□□□□ 0.94
SNRPA-208ENST00000600456 C3P01024 1663 aa20.89■□□□□ 0.94
SNRPA-208ENST00000600456 ZC3H13Q5T200 1668 aaKnown RBP20.89■□□□□ 0.94
SNRPA-208ENST00000600456 CEBPAP49715 358 aaPredicted RBP20.89■□□□□ 0.93
SNRPA-208ENST00000600456 ABCC3O15438 1527 aa20.88■□□□□ 0.93
SNRPA-208ENST00000600456 KANK1Q14678 1352 aa20.88■□□□□ 0.93
SNRPA-208ENST00000600456 PLPPR3Q6T4P5 718 aa20.88■□□□□ 0.93
SNRPA-208ENST00000600456 NPATQ14207 1427 aa20.87■□□□□ 0.93
SNRPA-208ENST00000600456 HFM1A2PYH4 1435 aa20.85■□□□□ 0.93
SNRPA-208ENST00000600456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.84■□□□□ 0.932e-9■■□□□ 11.7
SNRPA-208ENST00000600456 NAIPQ13075 1403 aa20.84■□□□□ 0.93
SNRPA-208ENST00000600456 VWDEQ8N2E2 1590 aa20.84■□□□□ 0.93
SNRPA-208ENST00000600456 PZPP20742 1482 aa20.83■□□□□ 0.93
SNRPA-208ENST00000600456 LMTK2Q8IWU2 1503 aa20.83■□□□□ 0.92
SNRPA-208ENST00000600456 UNC13BO14795 1591 aa20.81■□□□□ 0.92
SNRPA-208ENST00000600456 GCC2Q8IWJ2 1684 aa20.81■□□□□ 0.92
SNRPA-208ENST00000600456 ARHGAP31Q2M1Z3 1444 aa20.8■□□□□ 0.92
SNRPA-208ENST00000600456 CAMSAP1Q5T5Y3 1602 aa20.79■□□□□ 0.92
SNRPA-208ENST00000600456 LMTK3Q96Q04 1460 aa20.79■□□□□ 0.92
SNRPA-208ENST00000600456 CEP152O94986 1710 aa20.78■□□□□ 0.92
SNRPA-208ENST00000600456 PREX1Q8TCU6 1659 aa20.78■□□□□ 0.92
SNRPA-208ENST00000600456 UHRF1BP1Q6BDS2 1440 aa20.78■□□□□ 0.92
SNRPA-208ENST00000600456 SETD1BQ9UPS6 1966 aaKnown RBP20.77■□□□□ 0.92
SNRPA-208ENST00000600456 TNRQ92752 1358 aa20.74■□□□□ 0.91
SNRPA-208ENST00000600456 EFCAB6Q5THR3 1501 aa20.74■□□□□ 0.91
SNRPA-208ENST00000600456 FBXO31Q5XUX0 539 aaPredicted RBP20.74■□□□□ 0.91
SNRPA-208ENST00000600456 NUP155O75694 1391 aa20.73■□□□□ 0.91
SNRPA-208ENST00000600456 IQGAP3Q86VI3 1631 aa20.73■□□□□ 0.91
SNRPA-208ENST00000600456 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
SNRPA-208ENST00000600456 ERVK-7P63135 1459 aa20.72■□□□□ 0.91
SNRPA-208ENST00000600456 TET3O43151 1660 aa20.71■□□□□ 0.91
SNRPA-208ENST00000600456 RPRD2Q5VT52 1461 aaKnown RBP20.71■□□□□ 0.91
SNRPA-208ENST00000600456 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
SNRPA-208ENST00000600456 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
SNRPA-208ENST00000600456 NLRP1Q9C000 1473 aa20.69■□□□□ 0.9
SNRPA-208ENST00000600456 SETD5Q9C0A6 1442 aa20.67■□□□□ 0.9
SNRPA-208ENST00000600456 A2ML1A8K2U0 1454 aa20.67■□□□□ 0.9
SNRPA-208ENST00000600456 ZNF142P52746 1687 aaPredicted RBP20.67■□□□□ 0.9
SNRPA-208ENST00000600456 CEP170BQ9Y4F5 1589 aaPredicted RBP20.66■□□□□ 0.9
SNRPA-208ENST00000600456 NOS1P29475 1434 aa20.64■□□□□ 0.89
SNRPA-208ENST00000600456 HSPA2P54652 639 aa20.64■□□□□ 0.89
SNRPA-208ENST00000600456 TRIM52Q96A61 297 aa20.63■□□□□ 0.89
SNRPA-208ENST00000600456 E9PCH4 1651 aa20.6■□□□□ 0.89
SNRPA-208ENST00000600456 SLC52A1Q9NWF4 448 aa20.59■□□□□ 0.89
SNRPA-208ENST00000600456 SYNMO15061 1565 aa20.59■□□□□ 0.89
SNRPA-208ENST00000600456 RAB3GAP2Q9H2M9 1393 aa20.59■□□□□ 0.89
SNRPA-208ENST00000600456 PLA2R1Q13018 1463 aa20.57■□□□□ 0.88
SNRPA-208ENST00000600456 HRCP23327 699 aa20.57■□□□□ 0.88
SNRPA-208ENST00000600456 THEMISQ8N1K5 641 aaPredicted RBP20.57■□□□□ 0.88
SNRPA-208ENST00000600456 UGGT1Q9NYU2 1555 aa20.57■□□□□ 0.88
SNRPA-208ENST00000600456 SLC4A1APQ9BWU0 796 aaKnown RBP20.56■□□□□ 0.88
SNRPA-208ENST00000600456 CFAP65Q6ZU64 1925 aaKnown RBP20.56■□□□□ 0.88
SNRPA-208ENST00000600456 PTPRTO14522 1441 aa20.53■□□□□ 0.88
SNRPA-208ENST00000600456 IDI1Q13907 227 aa20.53■□□□□ 0.88
SNRPA-208ENST00000600456 PKD2Q13563 968 aa20.52■□□□□ 0.88
SNRPA-208ENST00000600456 KDM5AP29375 1690 aaKnown RBP20.51■□□□□ 0.87
SNRPA-208ENST00000600456 TRIM26Q12899 539 aaPredicted RBP20.51■□□□□ 0.87
SNRPA-208ENST00000600456 DMRT2Q9Y5R5 561 aa20.51■□□□□ 0.87
SNRPA-208ENST00000600456 PIK3C2BO00750 1634 aa20.51■□□□□ 0.87
SNRPA-208ENST00000600456 UBR1Q8IWV7 1749 aa20.5■□□□□ 0.87
SNRPA-208ENST00000600456 MPHOSPH9Q99550 1183 aa20.5■□□□□ 0.87
SNRPA-208ENST00000600456 STAG3Q9UJ98 1225 aa20.49■□□□□ 0.87
SNRPA-208ENST00000600456 STRCQ7RTU9 1775 aa20.49■□□□□ 0.87
SNRPA-208ENST00000600456 ADGRB3O60242 1522 aa20.48■□□□□ 0.87
SNRPA-208ENST00000600456 SPHKAPQ2M3C7 1700 aa20.48■□□□□ 0.87
SNRPA-208ENST00000600456 TRPM2O94759 1503 aa20.48■□□□□ 0.87
SNRPA-208ENST00000600456 ARHGAP23Q9P227 1491 aa20.46■□□□□ 0.87
SNRPA-208ENST00000600456 ANKLE2Q86XL3 938 aa20.46■□□□□ 0.87
SNRPA-208ENST00000600456 SLIT1O75093 1534 aa20.46■□□□□ 0.87
SNRPA-208ENST00000600456 NCKAP5LQ9HCH0 1330 aa20.45■□□□□ 0.86
SNRPA-208ENST00000600456 TMEM2Q9UHN6 1383 aa20.45■□□□□ 0.86
SNRPA-208ENST00000600456 TMEM131LA2VDJ0 1609 aa20.42■□□□□ 0.86
SNRPA-208ENST00000600456 EID1Q9Y6B2 187 aa20.41■□□□□ 0.86
SNRPA-208ENST00000600456 MED14O60244 1454 aa20.41■□□□□ 0.86
SNRPA-208ENST00000600456 POLR1AO95602 1720 aaPredicted RBP20.41■□□□□ 0.86
SNRPA-208ENST00000600456 SCAF11Q99590 1463 aaKnown RBP20.4■□□□□ 0.86
SNRPA-208ENST00000600456 NEURL4Q96JN8 1562 aa20.39■□□□□ 0.85
SNRPA-208ENST00000600456 FOXD1Q16676 465 aa20.39■□□□□ 0.85
SNRPA-208ENST00000600456 CLTCL1P53675 1640 aa20.38■□□□□ 0.85
SNRPA-208ENST00000600456 CHGAP10645 457 aaKnown RBP20.38■□□□□ 0.85
SNRPA-208ENST00000600456 TXNDC2Q86VQ3 553 aa20.38■□□□□ 0.85
SNRPA-208ENST00000600456 NPHP4O75161 1426 aaPredicted RBP20.37■□□□□ 0.85
SNRPA-208ENST00000600456 HDGFP51858 240 aaKnown RBP20.37■□□□□ 0.85
SNRPA-208ENST00000600456 CCDC144AA2RUR9 1427 aa20.36■□□□□ 0.85
SNRPA-208ENST00000600456 ZFYVE9O95405 1425 aa20.36■□□□□ 0.85
SNRPA-208ENST00000600456 LTKP29376 864 aa20.35■□□□□ 0.85
SNRPA-208ENST00000600456 RIMS2Q9UQ26 1411 aa20.35■□□□□ 0.85
SNRPA-208ENST00000600456 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms