RNA–Protein interactions for RNA: ENST00000599476.1

GRAMD1A-210, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-210ENST00000599476 SHANK2Q9UPX8 1470 aa12.09□□□□□ -0.47
GRAMD1A-210ENST00000599476 ANKRD30AQ9BXX3 1397 aa12.09□□□□□ -0.47
GRAMD1A-210ENST00000599476 MADDQ8WXG6 1647 aa12.09□□□□□ -0.47
GRAMD1A-210ENST00000599476 CHIC2Q9UKJ5 165 aa12.09□□□□□ -0.47
GRAMD1A-210ENST00000599476 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
GRAMD1A-210ENST00000599476 KIF15Q9NS87 1388 aa12.07□□□□□ -0.48
GRAMD1A-210ENST00000599476 CEBPAP49715 358 aaPredicted RBP12.07□□□□□ -0.48
GRAMD1A-210ENST00000599476 NCOA1Q15788 1441 aa12.07□□□□□ -0.48
GRAMD1A-210ENST00000599476 ZMYM3Q14202 1370 aa12.06□□□□□ -0.48
GRAMD1A-210ENST00000599476 DNMT1P26358 1616 aaKnown RBP12.06□□□□□ -0.48
GRAMD1A-210ENST00000599476 WASHC2CQ9Y4E1 1318 aa12.06□□□□□ -0.48
GRAMD1A-210ENST00000599476 DMRT2Q9Y5R5 561 aa12.05□□□□□ -0.48
GRAMD1A-210ENST00000599476 RIMS1Q86UR5 1692 aaKnown RBP12.05□□□□□ -0.48
GRAMD1A-210ENST00000599476 DUOX2Q9NRD8 1548 aa12.05□□□□□ -0.48
GRAMD1A-210ENST00000599476 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
GRAMD1A-210ENST00000599476 CROCC2H7BZ55 1655 aa12.04□□□□□ -0.48
GRAMD1A-210ENST00000599476 FER1L4A9Z1Z3 1794 aa12.04□□□□□ -0.48
GRAMD1A-210ENST00000599476 ROCK1Q13464 1354 aa12.03□□□□□ -0.48
GRAMD1A-210ENST00000599476 ERBINQ96RT1 1412 aa12.03□□□□□ -0.48
GRAMD1A-210ENST00000599476 ADGRL2O95490 1459 aa12.02□□□□□ -0.48
GRAMD1A-210ENST00000599476 ZEB1P37275 1124 aaPredicted RBP12.02□□□□□ -0.49
GRAMD1A-210ENST00000599476 SETD1BQ9UPS6 1966 aaKnown RBP12.01□□□□□ -0.49
GRAMD1A-210ENST00000599476 PTPRKQ15262 1439 aa12.01□□□□□ -0.49
GRAMD1A-210ENST00000599476 FAM135AQ9P2D6 1515 aa12.01□□□□□ -0.49
GRAMD1A-210ENST00000599476 MED1Q15648 1581 aaPredicted RBP12.01□□□□□ -0.49
GRAMD1A-210ENST00000599476 ACIN1Q9UKV3 1341 aaKnown RBP12□□□□□ -0.49
GRAMD1A-210ENST00000599476 RAB3GAP2Q9H2M9 1393 aa12□□□□□ -0.49
GRAMD1A-210ENST00000599476 HFM1A2PYH4 1435 aa12□□□□□ -0.49
GRAMD1A-210ENST00000599476 NPATQ14207 1427 aa12□□□□□ -0.49
GRAMD1A-210ENST00000599476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.99□□□□□ -0.498e-24■□□□□ 10.9
GRAMD1A-210ENST00000599476 KANK1Q14678 1352 aa11.99□□□□□ -0.49
GRAMD1A-210ENST00000599476 ANKRD50Q9ULJ7 1429 aa11.99□□□□□ -0.49
GRAMD1A-210ENST00000599476 EIF2AK4Q9P2K8 1649 aaKnown RBP11.98□□□□□ -0.49
GRAMD1A-210ENST00000599476 IQSEC2Q5JU85 1478 aa11.98□□□□□ -0.49
GRAMD1A-210ENST00000599476 MROH2AA6NES4 1674 aa11.97□□□□□ -0.49
GRAMD1A-210ENST00000599476 HRCP23327 699 aa11.97□□□□□ -0.49
GRAMD1A-210ENST00000599476 KDM5DQ9BY66 1539 aa11.96□□□□□ -0.49
GRAMD1A-210ENST00000599476 NAIPQ13075 1403 aa11.96□□□□□ -0.49
GRAMD1A-210ENST00000599476 UHRF1BP1Q6BDS2 1440 aa11.96□□□□□ -0.49
GRAMD1A-210ENST00000599476 RNF17Q9BXT8 1623 aaKnown RBP11.96□□□□□ -0.5
GRAMD1A-210ENST00000599476 C3P01024 1663 aa11.95□□□□□ -0.5
GRAMD1A-210ENST00000599476 UBAP1LF5GYI3 381 aa11.95□□□□□ -0.5
GRAMD1A-210ENST00000599476 FBXO31Q5XUX0 539 aaPredicted RBP11.95□□□□□ -0.5
GRAMD1A-210ENST00000599476 TRIM52Q96A61 297 aa11.95□□□□□ -0.5
GRAMD1A-210ENST00000599476 CLTCQ00610 1675 aaKnown RBP11.94□□□□□ -0.5
GRAMD1A-210ENST00000599476 PZPP20742 1482 aa11.94□□□□□ -0.5
GRAMD1A-210ENST00000599476 LTBP4Q8N2S1 1624 aa11.93□□□□□ -0.5
GRAMD1A-210ENST00000599476 ABCC3O15438 1527 aa11.93□□□□□ -0.5
GRAMD1A-210ENST00000599476 GCC2Q8IWJ2 1684 aa11.93□□□□□ -0.5
GRAMD1A-210ENST00000599476 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
GRAMD1A-210ENST00000599476 HSPA1LP34931 641 aa11.92□□□□□ -0.5
GRAMD1A-210ENST00000599476 TNRQ92752 1358 aa11.92□□□□□ -0.5
GRAMD1A-210ENST00000599476 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
GRAMD1A-210ENST00000599476 MROH1Q8NDA8 1641 aa11.91□□□□□ -0.5
GRAMD1A-210ENST00000599476 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
GRAMD1A-210ENST00000599476 ZC3H13Q5T200 1668 aaKnown RBP11.9□□□□□ -0.5
GRAMD1A-210ENST00000599476 DHX57Q6P158 1386 aaKnown RBP11.9□□□□□ -0.5
GRAMD1A-210ENST00000599476 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
GRAMD1A-210ENST00000599476 THEMISQ8N1K5 641 aaPredicted RBP11.89□□□□□ -0.51
GRAMD1A-210ENST00000599476 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
GRAMD1A-210ENST00000599476 PREX1Q8TCU6 1659 aa11.89□□□□□ -0.51
GRAMD1A-210ENST00000599476 LMTK2Q8IWU2 1503 aa11.89□□□□□ -0.51
GRAMD1A-210ENST00000599476 NUP155O75694 1391 aa11.89□□□□□ -0.51
GRAMD1A-210ENST00000599476 VWDEQ8N2E2 1590 aa11.88□□□□□ -0.51
GRAMD1A-210ENST00000599476 PTPRTO14522 1441 aa11.87□□□□□ -0.51
GRAMD1A-210ENST00000599476 PKD2Q13563 968 aa11.87□□□□□ -0.51
GRAMD1A-210ENST00000599476 NLRP1Q9C000 1473 aa11.87□□□□□ -0.51
GRAMD1A-210ENST00000599476 STRCQ7RTU9 1775 aa11.87□□□□□ -0.51
GRAMD1A-210ENST00000599476 SLC52A1Q9NWF4 448 aa11.86□□□□□ -0.51
GRAMD1A-210ENST00000599476 A2ML1A8K2U0 1454 aa11.86□□□□□ -0.51
GRAMD1A-210ENST00000599476 ERVK-7P63135 1459 aa11.86□□□□□ -0.51
GRAMD1A-210ENST00000599476 RGS17Q9UGC6 210 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1A-210ENST00000599476 RPRD2Q5VT52 1461 aaKnown RBP11.84□□□□□ -0.51
GRAMD1A-210ENST00000599476 SLC4A1APQ9BWU0 796 aaKnown RBP11.84□□□□□ -0.51
GRAMD1A-210ENST00000599476 CAMSAP1Q5T5Y3 1602 aa11.84□□□□□ -0.51
GRAMD1A-210ENST00000599476 CEP152O94986 1710 aa11.83□□□□□ -0.52
GRAMD1A-210ENST00000599476 IDI1Q13907 227 aa11.83□□□□□ -0.52
GRAMD1A-210ENST00000599476 ANKLE2Q86XL3 938 aa11.83□□□□□ -0.52
GRAMD1A-210ENST00000599476 NOS1P29475 1434 aa11.83□□□□□ -0.52
GRAMD1A-210ENST00000599476 UNC13BO14795 1591 aa11.83□□□□□ -0.52
GRAMD1A-210ENST00000599476 CEP170BQ9Y4F5 1589 aaPredicted RBP11.83□□□□□ -0.52
GRAMD1A-210ENST00000599476 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
GRAMD1A-210ENST00000599476 PLA2R1Q13018 1463 aa11.82□□□□□ -0.52
GRAMD1A-210ENST00000599476 EFCAB6Q5THR3 1501 aa11.81□□□□□ -0.52
GRAMD1A-210ENST00000599476 MPHOSPH9Q99550 1183 aa11.81□□□□□ -0.52
GRAMD1A-210ENST00000599476 MYO3AQ8NEV4 1616 aa11.81□□□□□ -0.52
GRAMD1A-210ENST00000599476 NCKAP5LQ9HCH0 1330 aa11.81□□□□□ -0.52
GRAMD1A-210ENST00000599476 UGGT1Q9NYU2 1555 aa11.8□□□□□ -0.52
GRAMD1A-210ENST00000599476 CFAP65Q6ZU64 1925 aaKnown RBP11.8□□□□□ -0.52
GRAMD1A-210ENST00000599476 TET3O43151 1660 aa11.79□□□□□ -0.52
GRAMD1A-210ENST00000599476 ZNF142P52746 1687 aaPredicted RBP11.79□□□□□ -0.52
GRAMD1A-210ENST00000599476 IQGAP3Q86VI3 1631 aa11.78□□□□□ -0.52
GRAMD1A-210ENST00000599476 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
GRAMD1A-210ENST00000599476 NEUROD1Q13562 356 aa11.78□□□□□ -0.52
GRAMD1A-210ENST00000599476 EID1Q9Y6B2 187 aa11.78□□□□□ -0.52
GRAMD1A-210ENST00000599476 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.53
GRAMD1A-210ENST00000599476 PIP4K2BP78356 416 aa11.76□□□□□ -0.53
GRAMD1A-210ENST00000599476 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
GRAMD1A-210ENST00000599476 TMEM2Q9UHN6 1383 aa11.75□□□□□ -0.53
GRAMD1A-210ENST00000599476 LTKP29376 864 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms