RNA–Protein interactions for RNA: ENST00000599362.5

SNRPA-206, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-206ENST00000599362 ZNF142P52746 1687 aaPredicted RBP29.16■■■□□ 2.26
SNRPA-206ENST00000599362 CAMSAP1Q5T5Y3 1602 aa29.14■■■□□ 2.26
SNRPA-206ENST00000599362 CERKQ8TCT0 537 aa29.14■■■□□ 2.26
SNRPA-206ENST00000599362 PTPN23Q9H3S7 1636 aa29.13■■■□□ 2.25
SNRPA-206ENST00000599362 CEP170BQ9Y4F5 1589 aaPredicted RBP29.13■■■□□ 2.25
SNRPA-206ENST00000599362 PZPP20742 1482 aa29.12■■■□□ 2.25
SNRPA-206ENST00000599362 WASHC2CQ9Y4E1 1318 aa29.12■■■□□ 2.25
SNRPA-206ENST00000599362 RNF17Q9BXT8 1623 aaKnown RBP29.12■■■□□ 2.25
SNRPA-206ENST00000599362 ABCC5O15440 1437 aa29.11■■■□□ 2.25
SNRPA-206ENST00000599362 FGD6Q6ZV73 1430 aa29.11■■■□□ 2.25
SNRPA-206ENST00000599362 TCOF1Q13428 1488 aaKnown RBP29.1■■■□□ 2.25
SNRPA-206ENST00000599362 SHANK2Q9UPX8 1470 aa29.1■■■□□ 2.25
SNRPA-206ENST00000599362 EIF2AK4Q9P2K8 1649 aaKnown RBP29.1■■■□□ 2.25
SNRPA-206ENST00000599362 PLA2R1Q13018 1463 aa29.08■■■□□ 2.25
SNRPA-206ENST00000599362 DUOX2Q9NRD8 1548 aa29.07■■■□□ 2.24
SNRPA-206ENST00000599362 CROCC2H7BZ55 1655 aa29.06■■■□□ 2.24
SNRPA-206ENST00000599362 A2ML1A8K2U0 1454 aa29.06■■■□□ 2.24
SNRPA-206ENST00000599362 FBXO31Q5XUX0 539 aaPredicted RBP29.06■■■□□ 2.24
SNRPA-206ENST00000599362 TNRQ92752 1358 aa29.05■■■□□ 2.24
SNRPA-206ENST00000599362 DAPK1P53355 1430 aa29.04■■■□□ 2.24
SNRPA-206ENST00000599362 DNMT1P26358 1616 aaKnown RBP29.03■■■□□ 2.24
SNRPA-206ENST00000599362 MROH1Q8NDA8 1641 aa29.03■■■□□ 2.24
SNRPA-206ENST00000599362 ABCC3O15438 1527 aa29.03■■■□□ 2.24
SNRPA-206ENST00000599362 PKD2Q13563 968 aa29.02■■■□□ 2.24
SNRPA-206ENST00000599362 ZC3H13Q5T200 1668 aaKnown RBP29.02■■■□□ 2.24
SNRPA-206ENST00000599362 KIF15Q9NS87 1388 aa29.01■■■□□ 2.24
SNRPA-206ENST00000599362 NCKAP5LQ9HCH0 1330 aa29.01■■■□□ 2.23
SNRPA-206ENST00000599362 ERBINQ96RT1 1412 aa28.98■■■□□ 2.23
SNRPA-206ENST00000599362 LTBP4Q8N2S1 1624 aa28.98■■■□□ 2.23
SNRPA-206ENST00000599362 RRP7BPQ9NSQ0 103 aa28.96■■■□□ 2.23
SNRPA-206ENST00000599362 NLRP1Q9C000 1473 aa28.95■■■□□ 2.22
SNRPA-206ENST00000599362 SPATA31D1Q6ZQQ2 1576 aa28.92■■■□□ 2.22
SNRPA-206ENST00000599362 PRDM15P57071 1507 aaPredicted RBP28.92■■■□□ 2.22
SNRPA-206ENST00000599362 ANKRD30AQ9BXX3 1397 aa28.91■■■□□ 2.22
SNRPA-206ENST00000599362 CEP152O94986 1710 aa28.89■■■□□ 2.22
SNRPA-206ENST00000599362 ERVK-7P63135 1459 aa28.89■■■□□ 2.22
SNRPA-206ENST00000599362 DEPDC5O75140 1603 aa28.87■■■□□ 2.21
SNRPA-206ENST00000599362 CHIC2Q9UKJ5 165 aa28.87■■■□□ 2.21
SNRPA-206ENST00000599362 ADGRL2O95490 1459 aa28.86■■■□□ 2.21
SNRPA-206ENST00000599362 IQSEC2Q5JU85 1478 aa28.86■■■□□ 2.21
SNRPA-206ENST00000599362 THEMISQ8N1K5 641 aaPredicted RBP28.86■■■□□ 2.21
SNRPA-206ENST00000599362 ARHGAP31Q2M1Z3 1444 aa28.86■■■□□ 2.21
SNRPA-206ENST00000599362 UGGT1Q9NYU2 1555 aa28.85■■■□□ 2.21
SNRPA-206ENST00000599362 ZNF335Q9H4Z2 1342 aaPredicted RBP28.84■■■□□ 2.21
SNRPA-206ENST00000599362 NEURL4Q96JN8 1562 aa28.84■■■□□ 2.21
SNRPA-206ENST00000599362 POLR1AO95602 1720 aaPredicted RBP28.83■■■□□ 2.21
SNRPA-206ENST00000599362 FAM50AQ14320 339 aaKnown RBP28.82■■■□□ 2.2
SNRPA-206ENST00000599362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.82■■■□□ 2.2
SNRPA-206ENST00000599362 ANKLE2Q86XL3 938 aa28.8■■■□□ 2.2
SNRPA-206ENST00000599362 VWDEQ8N2E2 1590 aa28.79■■■□□ 2.2
SNRPA-206ENST00000599362 KANK1Q14678 1352 aa28.78■■■□□ 2.2
SNRPA-206ENST00000599362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.78■■■□□ 2.22e-9■■□□□ 11.7
SNRPA-206ENST00000599362 LMTK2Q8IWU2 1503 aa28.78■■■□□ 2.2
SNRPA-206ENST00000599362 MED14O60244 1454 aa28.76■■■□□ 2.19
SNRPA-206ENST00000599362 CFAP65Q6ZU64 1925 aaKnown RBP28.75■■■□□ 2.19
SNRPA-206ENST00000599362 NPHP4O75161 1426 aaPredicted RBP28.7■■■□□ 2.19
SNRPA-206ENST00000599362 ANKRD50Q9ULJ7 1429 aa28.7■■■□□ 2.19
SNRPA-206ENST00000599362 UBR1Q8IWV7 1749 aa28.7■■■□□ 2.19
SNRPA-206ENST00000599362 EFCAB6Q5THR3 1501 aa28.64■■■□□ 2.18
SNRPA-206ENST00000599362 ROCK1Q13464 1354 aa28.64■■■□□ 2.18
SNRPA-206ENST00000599362 ARHGAP23Q9P227 1491 aa28.64■■■□□ 2.17
SNRPA-206ENST00000599362 CPS1P31327 1500 aa28.64■■■□□ 2.17
SNRPA-206ENST00000599362 IQGAP1P46940 1657 aa28.63■■■□□ 2.17
SNRPA-206ENST00000599362 SLIT1O75093 1534 aa28.63■■■□□ 2.17
SNRPA-206ENST00000599362 NOS1P29475 1434 aa28.62■■■□□ 2.17
SNRPA-206ENST00000599362 PIK3C2BO00750 1634 aa28.6■■■□□ 2.17
SNRPA-206ENST00000599362 SCAF11Q99590 1463 aaKnown RBP28.59■■■□□ 2.17
SNRPA-206ENST00000599362 SYNMO15061 1565 aa28.58■■■□□ 2.17
SNRPA-206ENST00000599362 IDI1Q13907 227 aa28.57■■■□□ 2.16
SNRPA-206ENST00000599362 PPARGC1BQ86YN6 1023 aaKnown RBP28.57■■■□□ 2.16
SNRPA-206ENST00000599362 RPRD2Q5VT52 1461 aaKnown RBP28.57■■■□□ 2.16
SNRPA-206ENST00000599362 KDM5AP29375 1690 aaKnown RBP28.57■■■□□ 2.16
SNRPA-206ENST00000599362 UNC13BO14795 1591 aa28.56■■■□□ 2.16
SNRPA-206ENST00000599362 LTKP29376 864 aa28.56■■■□□ 2.16
SNRPA-206ENST00000599362 UBAP1LF5GYI3 381 aa28.55■■■□□ 2.16
SNRPA-206ENST00000599362 TMEM2Q9UHN6 1383 aa28.54■■■□□ 2.16
SNRPA-206ENST00000599362 TXNDC2Q86VQ3 553 aa28.54■■■□□ 2.16
SNRPA-206ENST00000599362 TET3O43151 1660 aa28.53■■■□□ 2.16
SNRPA-206ENST00000599362 SLC52A1Q9NWF4 448 aa28.5■■■□□ 2.15
SNRPA-206ENST00000599362 STAG3Q9UJ98 1225 aa28.5■■■□□ 2.15
SNRPA-206ENST00000599362 EID1Q9Y6B2 187 aa28.5■■■□□ 2.15
SNRPA-206ENST00000599362 GCC2Q8IWJ2 1684 aa28.48■■■□□ 2.15
SNRPA-206ENST00000599362 STRCP1A6NGW2 1772 aa28.47■■■□□ 2.15
SNRPA-206ENST00000599362 ADGRB3O60242 1522 aa28.47■■■□□ 2.15
SNRPA-206ENST00000599362 ITGAEP38570 1179 aa28.46■■■□□ 2.15
SNRPA-206ENST00000599362 RRBP1Q9P2E9 1410 aaKnown RBP28.45■■■□□ 2.15
SNRPA-206ENST00000599362 IQGAP3Q86VI3 1631 aa28.43■■■□□ 2.14
SNRPA-206ENST00000599362 LRRC7Q96NW7 1537 aa28.43■■■□□ 2.14
SNRPA-206ENST00000599362 TOM1O60784 492 aa28.42■■■□□ 2.14
SNRPA-206ENST00000599362 E9PCH4 1651 aa28.39■■■□□ 2.14
SNRPA-206ENST00000599362 NUP155O75694 1391 aa28.38■■■□□ 2.13
SNRPA-206ENST00000599362 ALKQ9UM73 1620 aa28.36■■■□□ 2.13
SNRPA-206ENST00000599362 ZFYVE9O95405 1425 aa28.35■■■□□ 2.13
SNRPA-206ENST00000599362 TMEM131LA2VDJ0 1609 aa28.34■■■□□ 2.13
SNRPA-206ENST00000599362 PIP4K2BP78356 416 aa28.31■■■□□ 2.12
SNRPA-206ENST00000599362 MYO5BQ9ULV0 1848 aa28.3■■■□□ 2.12
SNRPA-206ENST00000599362 RIMS2Q9UQ26 1411 aa28.28■■■□□ 2.12
SNRPA-206ENST00000599362 DISP3Q9P2K9 1392 aa28.28■■■□□ 2.12
SNRPA-206ENST00000599362 SCAF1Q9H7N4 1312 aaKnown RBP28.28■■■□□ 2.12
SNRPA-206ENST00000599362 SLC26A8Q96RN1 970 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms