RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 DMRT2Q9Y5R5 561 aa30.85■■■□□ 2.53
ARHGEF1-217ENST00000598812 PTPN23Q9H3S7 1636 aa30.83■■■□□ 2.53
ARHGEF1-217ENST00000598812 PTPRKQ15262 1439 aa30.81■■■□□ 2.52
ARHGEF1-217ENST00000598812 FGD6Q6ZV73 1430 aa30.8■■■□□ 2.52
ARHGEF1-217ENST00000598812 FAM135AQ9P2D6 1515 aa30.79■■■□□ 2.52
ARHGEF1-217ENST00000598812 IQSEC2Q5JU85 1478 aa30.79■■■□□ 2.52
ARHGEF1-217ENST00000598812 KDM5DQ9BY66 1539 aa30.78■■■□□ 2.52
ARHGEF1-217ENST00000598812 WASHC2CQ9Y4E1 1318 aa30.77■■■□□ 2.52
ARHGEF1-217ENST00000598812 MYO3AQ8NEV4 1616 aa30.74■■■□□ 2.51
ARHGEF1-217ENST00000598812 SHANK2Q9UPX8 1470 aa30.74■■■□□ 2.51
ARHGEF1-217ENST00000598812 ABCC5O15440 1437 aa30.73■■■□□ 2.51
ARHGEF1-217ENST00000598812 TCOF1Q13428 1488 aaKnown RBP30.73■■■□□ 2.51
ARHGEF1-217ENST00000598812 CROCC2H7BZ55 1655 aa30.73■■■□□ 2.51
ARHGEF1-217ENST00000598812 EIF2AK4Q9P2K8 1649 aaKnown RBP30.72■■■□□ 2.51
ARHGEF1-217ENST00000598812 DUOX2Q9NRD8 1548 aa30.71■■■□□ 2.51
ARHGEF1-217ENST00000598812 NCOA1Q15788 1441 aa30.71■■■□□ 2.51
ARHGEF1-217ENST00000598812 RNF17Q9BXT8 1623 aaKnown RBP30.7■■■□□ 2.51
ARHGEF1-217ENST00000598812 DAPK1P53355 1430 aa30.7■■■□□ 2.5
ARHGEF1-217ENST00000598812 DNMT1P26358 1616 aaKnown RBP30.69■■■□□ 2.5
ARHGEF1-217ENST00000598812 ZNF142P52746 1687 aaPredicted RBP30.69■■■□□ 2.5
ARHGEF1-217ENST00000598812 CEP170BQ9Y4F5 1589 aaPredicted RBP30.69■■■□□ 2.5
ARHGEF1-217ENST00000598812 CAMSAP1Q5T5Y3 1602 aa30.69■■■□□ 2.5
ARHGEF1-217ENST00000598812 KIF15Q9NS87 1388 aa30.68■■■□□ 2.5
ARHGEF1-217ENST00000598812 PZPP20742 1482 aa30.68■■■□□ 2.5
ARHGEF1-217ENST00000598812 FBXO31Q5XUX0 539 aaPredicted RBP30.65■■■□□ 2.5
ARHGEF1-217ENST00000598812 RRP7BPQ9NSQ0 103 aa30.64■■■□□ 2.5
ARHGEF1-217ENST00000598812 TNRQ92752 1358 aa30.64■■■□□ 2.5
ARHGEF1-217ENST00000598812 ZC3H13Q5T200 1668 aaKnown RBP30.62■■■□□ 2.49
ARHGEF1-217ENST00000598812 ABCC3O15438 1527 aa30.62■■■□□ 2.49
ARHGEF1-217ENST00000598812 ERBINQ96RT1 1412 aa30.61■■■□□ 2.49
ARHGEF1-217ENST00000598812 A2ML1A8K2U0 1454 aa30.61■■■□□ 2.49
ARHGEF1-217ENST00000598812 FAM50AQ14320 339 aaKnown RBP30.6■■■□□ 2.49
ARHGEF1-217ENST00000598812 ANKRD30AQ9BXX3 1397 aa30.59■■■□□ 2.49
ARHGEF1-217ENST00000598812 CHIC2Q9UKJ5 165 aa30.59■■■□□ 2.49
ARHGEF1-217ENST00000598812 MROH1Q8NDA8 1641 aa30.58■■■□□ 2.49
ARHGEF1-217ENST00000598812 PLA2R1Q13018 1463 aa30.58■■■□□ 2.49
ARHGEF1-217ENST00000598812 NCKAP5LQ9HCH0 1330 aa30.56■■■□□ 2.48
ARHGEF1-217ENST00000598812 PKD2Q13563 968 aa30.54■■■□□ 2.48
ARHGEF1-217ENST00000598812 CEP152O94986 1710 aa30.52■■■□□ 2.48
ARHGEF1-217ENST00000598812 PRDM15P57071 1507 aaPredicted RBP30.52■■■□□ 2.48
ARHGEF1-217ENST00000598812 NLRP1Q9C000 1473 aa30.5■■■□□ 2.47
ARHGEF1-217ENST00000598812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.48■■■□□ 2.471e-6■■□□□ 13.2
ARHGEF1-217ENST00000598812 ADGRL2O95490 1459 aa30.47■■■□□ 2.47
ARHGEF1-217ENST00000598812 KANK1Q14678 1352 aa30.46■■■□□ 2.47
ARHGEF1-217ENST00000598812 DEPDC5O75140 1603 aa30.46■■■□□ 2.47
ARHGEF1-217ENST00000598812 ERVK-7P63135 1459 aa30.45■■■□□ 2.47
ARHGEF1-217ENST00000598812 THEMISQ8N1K5 641 aaPredicted RBP30.43■■■□□ 2.46
ARHGEF1-217ENST00000598812 UGGT1Q9NYU2 1555 aa30.43■■■□□ 2.46
ARHGEF1-217ENST00000598812 ZNF335Q9H4Z2 1342 aaPredicted RBP30.43■■■□□ 2.46
ARHGEF1-217ENST00000598812 ARHGAP31Q2M1Z3 1444 aa30.4■■■□□ 2.46
ARHGEF1-217ENST00000598812 CFAP65Q6ZU64 1925 aaKnown RBP30.4■■■□□ 2.46
ARHGEF1-217ENST00000598812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.4■■■□□ 2.46
ARHGEF1-217ENST00000598812 PPARGC1BQ86YN6 1023 aaKnown RBP30.39■■■□□ 2.46
ARHGEF1-217ENST00000598812 POLR1AO95602 1720 aaPredicted RBP30.39■■■□□ 2.45
ARHGEF1-217ENST00000598812 ANKLE2Q86XL3 938 aa30.37■■■□□ 2.45
ARHGEF1-217ENST00000598812 ANKRD50Q9ULJ7 1429 aa30.35■■■□□ 2.45
ARHGEF1-217ENST00000598812 UBAP1LF5GYI3 381 aa30.34■■■□□ 2.45
ARHGEF1-217ENST00000598812 MED1Q15648 1581 aaPredicted RBP30.33■■■□□ 2.45
ARHGEF1-217ENST00000598812 VWDEQ8N2E2 1590 aa30.32■■■□□ 2.45
ARHGEF1-217ENST00000598812 NEURL4Q96JN8 1562 aa30.32■■■□□ 2.45
ARHGEF1-217ENST00000598812 LMTK2Q8IWU2 1503 aa30.32■■■□□ 2.44
ARHGEF1-217ENST00000598812 ROCK1Q13464 1354 aa30.27■■■□□ 2.44
ARHGEF1-217ENST00000598812 ITGAEP38570 1179 aa30.26■■■□□ 2.43
ARHGEF1-217ENST00000598812 UBR1Q8IWV7 1749 aa30.25■■■□□ 2.43
ARHGEF1-217ENST00000598812 EFCAB6Q5THR3 1501 aa30.25■■■□□ 2.43
ARHGEF1-217ENST00000598812 NPHP4O75161 1426 aaPredicted RBP30.24■■■□□ 2.43
ARHGEF1-217ENST00000598812 MED14O60244 1454 aa30.24■■■□□ 2.43
ARHGEF1-217ENST00000598812 IQGAP1P46940 1657 aa30.18■■■□□ 2.42
ARHGEF1-217ENST00000598812 STAG3Q9UJ98 1225 aa30.18■■■□□ 2.42
ARHGEF1-217ENST00000598812 PIK3C2BO00750 1634 aa30.18■■■□□ 2.42
ARHGEF1-217ENST00000598812 UNC13BO14795 1591 aa30.16■■■□□ 2.42
ARHGEF1-217ENST00000598812 NOS1P29475 1434 aa30.15■■■□□ 2.42
ARHGEF1-217ENST00000598812 RPRD2Q5VT52 1461 aaKnown RBP30.15■■■□□ 2.42
ARHGEF1-217ENST00000598812 SCAF11Q99590 1463 aaKnown RBP30.15■■■□□ 2.42
ARHGEF1-217ENST00000598812 TET3O43151 1660 aa30.14■■■□□ 2.42
ARHGEF1-217ENST00000598812 SLIT1O75093 1534 aa30.14■■■□□ 2.42
ARHGEF1-217ENST00000598812 CPS1P31327 1500 aa30.14■■■□□ 2.42
ARHGEF1-217ENST00000598812 IDI1Q13907 227 aa30.14■■■□□ 2.42
ARHGEF1-217ENST00000598812 SYNMO15061 1565 aa30.14■■■□□ 2.42
ARHGEF1-217ENST00000598812 ARHGAP23Q9P227 1491 aa30.13■■■□□ 2.41
ARHGEF1-217ENST00000598812 HSPA1LP34931 641 aa30.12■■■□□ 2.41
ARHGEF1-217ENST00000598812 TXNDC2Q86VQ3 553 aa30.12■■■□□ 2.41
ARHGEF1-217ENST00000598812 EID1Q9Y6B2 187 aa30.12■■■□□ 2.41
ARHGEF1-217ENST00000598812 RRBP1Q9P2E9 1410 aaKnown RBP30.11■■■□□ 2.41
ARHGEF1-217ENST00000598812 ALKQ9UM73 1620 aa30.11■■■□□ 2.41
ARHGEF1-217ENST00000598812 KDM5AP29375 1690 aaKnown RBP30.11■■■□□ 2.41
ARHGEF1-217ENST00000598812 SLC52A1Q9NWF4 448 aa30.1■■■□□ 2.41
ARHGEF1-217ENST00000598812 LTKP29376 864 aa30.09■■■□□ 2.41
ARHGEF1-217ENST00000598812 GCC2Q8IWJ2 1684 aa30.09■■■□□ 2.41
ARHGEF1-217ENST00000598812 TMEM2Q9UHN6 1383 aa30.09■■■□□ 2.41
ARHGEF1-217ENST00000598812 NUP155O75694 1391 aa30.04■■■□□ 2.4
ARHGEF1-217ENST00000598812 IQGAP3Q86VI3 1631 aa30.04■■■□□ 2.4
ARHGEF1-217ENST00000598812 ADGRB3O60242 1522 aa30.04■■■□□ 2.4
ARHGEF1-217ENST00000598812 PIP4K2BP78356 416 aa30■■■□□ 2.39
ARHGEF1-217ENST00000598812 SCAF1Q9H7N4 1312 aaKnown RBP29.99■■■□□ 2.39
ARHGEF1-217ENST00000598812 E9PCH4 1651 aa29.99■■■□□ 2.39
ARHGEF1-217ENST00000598812 TOM1O60784 492 aa29.97■■■□□ 2.39
ARHGEF1-217ENST00000598812 STRCP1A6NGW2 1772 aa29.94■■■□□ 2.38
ARHGEF1-217ENST00000598812 LRRC7Q96NW7 1537 aa29.9■■■□□ 2.38
ARHGEF1-217ENST00000598812 NAIPQ13075 1403 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms