RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
ARHGEF1-216ENST00000598587 KDM5DQ9BY66 1539 aa18.42■□□□□ 0.54
ARHGEF1-216ENST00000598587 KIF3BO15066 747 aa18.4■□□□□ 0.54
ARHGEF1-216ENST00000598587 GGT6Q6P531 493 aa18.4■□□□□ 0.54
ARHGEF1-216ENST00000598587 DEPDC5O75140 1603 aa18.4■□□□□ 0.54
ARHGEF1-216ENST00000598587 NCOA1Q15788 1441 aa18.4■□□□□ 0.54
ARHGEF1-216ENST00000598587 CHIC2Q9UKJ5 165 aa18.39■□□□□ 0.53
ARHGEF1-216ENST00000598587 RRP7BPQ9NSQ0 103 aa18.38■□□□□ 0.53
ARHGEF1-216ENST00000598587 PRDM15P57071 1507 aaPredicted RBP18.38■□□□□ 0.53
ARHGEF1-216ENST00000598587 CEP152O94986 1710 aa18.37■□□□□ 0.53
ARHGEF1-216ENST00000598587 SETD1BQ9UPS6 1966 aaKnown RBP18.37■□□□□ 0.53
ARHGEF1-216ENST00000598587 ROCK1Q13464 1354 aa18.36■□□□□ 0.53
ARHGEF1-216ENST00000598587 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
ARHGEF1-216ENST00000598587 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
ARHGEF1-216ENST00000598587 CAMSAP1Q5T5Y3 1602 aa18.34■□□□□ 0.53
ARHGEF1-216ENST00000598587 GCC2Q8IWJ2 1684 aa18.33■□□□□ 0.52
ARHGEF1-216ENST00000598587 ITGAEP38570 1179 aa18.32■□□□□ 0.52
ARHGEF1-216ENST00000598587 NPATQ14207 1427 aa18.32■□□□□ 0.52
ARHGEF1-216ENST00000598587 PTPRKQ15262 1439 aa18.32■□□□□ 0.52
ARHGEF1-216ENST00000598587 WASHC2CQ9Y4E1 1318 aa18.31■□□□□ 0.52
ARHGEF1-216ENST00000598587 ABCC3O15438 1527 aa18.31■□□□□ 0.52
ARHGEF1-216ENST00000598587 ANKRD50Q9ULJ7 1429 aa18.31■□□□□ 0.52
ARHGEF1-216ENST00000598587 ZMYM3Q14202 1370 aa18.3■□□□□ 0.52
ARHGEF1-216ENST00000598587 KANK1Q14678 1352 aa18.3■□□□□ 0.52
ARHGEF1-216ENST00000598587 UNC13BO14795 1591 aa18.3■□□□□ 0.52
ARHGEF1-216ENST00000598587 MYO3AQ8NEV4 1616 aa18.29■□□□□ 0.52
ARHGEF1-216ENST00000598587 PZPP20742 1482 aa18.28■□□□□ 0.52
ARHGEF1-216ENST00000598587 CEBPAP49715 358 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF1-216ENST00000598587 UHRF1BP1Q6BDS2 1440 aa18.28■□□□□ 0.52
ARHGEF1-216ENST00000598587 ZNF142P52746 1687 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF1-216ENST00000598587 LMTK3Q96Q04 1460 aa18.27■□□□□ 0.52
ARHGEF1-216ENST00000598587 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
ARHGEF1-216ENST00000598587 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
ARHGEF1-216ENST00000598587 CFAP65Q6ZU64 1925 aaKnown RBP18.23■□□□□ 0.51
ARHGEF1-216ENST00000598587 TET3O43151 1660 aa18.23■□□□□ 0.51
ARHGEF1-216ENST00000598587 IQGAP3Q86VI3 1631 aa18.23■□□□□ 0.51
ARHGEF1-216ENST00000598587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.511e-6■■■■□ 24.6
ARHGEF1-216ENST00000598587 EFCAB6Q5THR3 1501 aa18.21■□□□□ 0.51
ARHGEF1-216ENST00000598587 CEP170BQ9Y4F5 1589 aaPredicted RBP18.21■□□□□ 0.51
ARHGEF1-216ENST00000598587 SPATA31D1Q6ZQQ2 1576 aa18.2■□□□□ 0.5
ARHGEF1-216ENST00000598587 HFM1A2PYH4 1435 aa18.19■□□□□ 0.5
ARHGEF1-216ENST00000598587 ARHGAP31Q2M1Z3 1444 aa18.19■□□□□ 0.5
ARHGEF1-216ENST00000598587 TNRQ92752 1358 aa18.17■□□□□ 0.5
ARHGEF1-216ENST00000598587 NAIPQ13075 1403 aa18.17■□□□□ 0.5
ARHGEF1-216ENST00000598587 ERVK-7P63135 1459 aa18.17■□□□□ 0.5
ARHGEF1-216ENST00000598587 NLRP1Q9C000 1473 aa18.16■□□□□ 0.5
ARHGEF1-216ENST00000598587 RPRD2Q5VT52 1461 aaKnown RBP18.15■□□□□ 0.5
ARHGEF1-216ENST00000598587 A2ML1A8K2U0 1454 aa18.14■□□□□ 0.5
ARHGEF1-216ENST00000598587 E9PCH4 1651 aa18.13■□□□□ 0.49
ARHGEF1-216ENST00000598587 POLR1AO95602 1720 aaPredicted RBP18.12■□□□□ 0.49
ARHGEF1-216ENST00000598587 FBXO31Q5XUX0 539 aaPredicted RBP18.11■□□□□ 0.49
ARHGEF1-216ENST00000598587 KDM5AP29375 1690 aaKnown RBP18.11■□□□□ 0.49
ARHGEF1-216ENST00000598587 STRCQ7RTU9 1775 aa18.1■□□□□ 0.49
ARHGEF1-216ENST00000598587 UGGT1Q9NYU2 1555 aa18.1■□□□□ 0.49
ARHGEF1-216ENST00000598587 NUP155O75694 1391 aa18.1■□□□□ 0.49
ARHGEF1-216ENST00000598587 UBR1Q8IWV7 1749 aa18.09■□□□□ 0.49
ARHGEF1-216ENST00000598587 HSPA2P54652 639 aa18.09■□□□□ 0.49
ARHGEF1-216ENST00000598587 SPHKAPQ2M3C7 1700 aa18.08■□□□□ 0.48
ARHGEF1-216ENST00000598587 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
ARHGEF1-216ENST00000598587 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
ARHGEF1-216ENST00000598587 SYNMO15061 1565 aa18.07■□□□□ 0.48
ARHGEF1-216ENST00000598587 PIK3C2BO00750 1634 aa18.06■□□□□ 0.48
ARHGEF1-216ENST00000598587 NOS1P29475 1434 aa18.04■□□□□ 0.48
ARHGEF1-216ENST00000598587 SETD5Q9C0A6 1442 aa18.02■□□□□ 0.48
ARHGEF1-216ENST00000598587 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
ARHGEF1-216ENST00000598587 THEMISQ8N1K5 641 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF1-216ENST00000598587 TRIM52Q96A61 297 aa18.01■□□□□ 0.47
ARHGEF1-216ENST00000598587 ADGRB3O60242 1522 aa18.01■□□□□ 0.47
ARHGEF1-216ENST00000598587 MYO5BQ9ULV0 1848 aa18■□□□□ 0.47
ARHGEF1-216ENST00000598587 PKD2Q13563 968 aa17.98■□□□□ 0.47
ARHGEF1-216ENST00000598587 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
ARHGEF1-216ENST00000598587 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
ARHGEF1-216ENST00000598587 KIF1BO60333 1816 aa17.97■□□□□ 0.47
ARHGEF1-216ENST00000598587 PTPRTO14522 1441 aa17.97■□□□□ 0.47
ARHGEF1-216ENST00000598587 TRPM2O94759 1503 aa17.96■□□□□ 0.47
ARHGEF1-216ENST00000598587 IQGAP1P46940 1657 aa17.96■□□□□ 0.47
ARHGEF1-216ENST00000598587 SLIT1O75093 1534 aa17.95■□□□□ 0.46
ARHGEF1-216ENST00000598587 TMEM131LA2VDJ0 1609 aa17.94■□□□□ 0.46
ARHGEF1-216ENST00000598587 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
ARHGEF1-216ENST00000598587 NEURL4Q96JN8 1562 aa17.94■□□□□ 0.46
ARHGEF1-216ENST00000598587 RAB3GAP2Q9H2M9 1393 aa17.93■□□□□ 0.46
ARHGEF1-216ENST00000598587 ANKLE2Q86XL3 938 aa17.92■□□□□ 0.46
ARHGEF1-216ENST00000598587 ARHGAP23Q9P227 1491 aa17.92■□□□□ 0.46
ARHGEF1-216ENST00000598587 CLTCL1P53675 1640 aa17.91■□□□□ 0.46
ARHGEF1-216ENST00000598587 SCAF11Q99590 1463 aaKnown RBP17.91■□□□□ 0.46
ARHGEF1-216ENST00000598587 IDI1Q13907 227 aa17.91■□□□□ 0.46
ARHGEF1-216ENST00000598587 MED14O60244 1454 aa17.9■□□□□ 0.46
ARHGEF1-216ENST00000598587 NCKAP5LQ9HCH0 1330 aa17.9■□□□□ 0.46
ARHGEF1-216ENST00000598587 EID1Q9Y6B2 187 aa17.88■□□□□ 0.45
ARHGEF1-216ENST00000598587 TMEM2Q9UHN6 1383 aa17.88■□□□□ 0.45
ARHGEF1-216ENST00000598587 NPHP4O75161 1426 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF1-216ENST00000598587 HRCP23327 699 aa17.86■□□□□ 0.45
ARHGEF1-216ENST00000598587 CHGAP10645 457 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-216ENST00000598587 HDGFP51858 240 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-216ENST00000598587 MPHOSPH9Q99550 1183 aa17.84■□□□□ 0.45
ARHGEF1-216ENST00000598587 TXNDC2Q86VQ3 553 aa17.82■□□□□ 0.44
ARHGEF1-216ENST00000598587 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
ARHGEF1-216ENST00000598587 RIMS2Q9UQ26 1411 aa17.81■□□□□ 0.44
ARHGEF1-216ENST00000598587 ZFYVE9O95405 1425 aa17.81■□□□□ 0.44
ARHGEF1-216ENST00000598587 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 504.2 ms