RNA–Protein interactions for RNA: ENST00000597793.5

PTOV1-209, Transcript of prostate tumor overexpressed 1, human

TSL 1 (best)

Gene PTOV1, Length 1,716 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTOV1-209	ENST00000597793	RNF17	Q9BXT8	1623 aa	Known RBP	28.78	■■■□□ 2.2
PTOV1-209	ENST00000597793	DEPDC5	O75140	1603 aa		28.76	■■■□□ 2.19
PTOV1-209	ENST00000597793	PPP6R1	Q9UPN7	881 aa		28.72	■■■□□ 2.19
PTOV1-209	ENST00000597793	UNC13B	O14795	1591 aa		28.72	■■■□□ 2.19
PTOV1-209	ENST00000597793	PRDM15	P57071	1507 aa	Predicted RBP	28.71	■■■□□ 2.19
PTOV1-209	ENST00000597793	FAM135A	Q9P2D6	1515 aa		28.71	■■■□□ 2.19
PTOV1-209	ENST00000597793	RAB3GAP2	Q9H2M9	1393 aa		28.71	■■■□□ 2.19
PTOV1-209	ENST00000597793	CCER1	Q8TC90	406 aa	Predicted RBP	28.7	■■■□□ 2.19
PTOV1-209	ENST00000597793	GGT6	Q6P531	493 aa		28.69	■■■□□ 2.18
PTOV1-209	ENST00000597793	MROH1	Q8NDA8	1641 aa		28.68	■■■□□ 2.18
PTOV1-209	ENST00000597793	KANK1	Q14678	1352 aa		28.68	■■■□□ 2.18
PTOV1-209	ENST00000597793	ZC3H13	Q5T200	1668 aa	Known RBP	28.65	■■■□□ 2.18
PTOV1-209	ENST00000597793	KDM5D	Q9BY66	1539 aa		28.63	■■■□□ 2.17
PTOV1-209	ENST00000597793	MLEC	Q14165	292 aa		28.63	■■■□□ 2.17
PTOV1-209	ENST00000597793	VWDE	Q8N2E2	1590 aa		28.62	■■■□□ 2.17
PTOV1-209	ENST00000597793	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.61	■■■□□ 2.17	5e-10	■■■■□ 19.9
PTOV1-209	ENST00000597793	IQGAP3	Q86VI3	1631 aa		28.61	■■■□□ 2.17
PTOV1-209	ENST00000597793	NUP155	O75694	1391 aa		28.61	■■■□□ 2.17
PTOV1-209	ENST00000597793	ESF1	Q9H501	851 aa	Known RBP	28.6	■■■□□ 2.17
PTOV1-209	ENST00000597793	CNTLN	Q9NXG0	1405 aa		28.6	■■■□□ 2.17
PTOV1-209	ENST00000597793	ADAMTSL3	P82987	1691 aa		28.59	■■■□□ 2.17
PTOV1-209	ENST00000597793	FER1L4	A9Z1Z3	1794 aa		28.59	■■■□□ 2.17
PTOV1-209	ENST00000597793	TRIM52	Q96A61	297 aa		28.59	■■■□□ 2.17
PTOV1-209	ENST00000597793	WASHC2C	Q9Y4E1	1318 aa		28.58	■■■□□ 2.17
PTOV1-209	ENST00000597793	LMTK2	Q8IWU2	1503 aa		28.57	■■■□□ 2.16
PTOV1-209	ENST00000597793	ABCC3	O15438	1527 aa		28.56	■■■□□ 2.16
PTOV1-209	ENST00000597793	CEP152	O94986	1710 aa		28.54	■■■□□ 2.16
PTOV1-209	ENST00000597793	MROH2A	A6NES4	1674 aa		28.54	■■■□□ 2.16
PTOV1-209	ENST00000597793	CLTC	Q00610	1675 aa	Known RBP	28.54	■■■□□ 2.16
PTOV1-209	ENST00000597793	TET3	O43151	1660 aa		28.52	■■■□□ 2.16
PTOV1-209	ENST00000597793	MADD	Q8WXG6	1647 aa		28.52	■■■□□ 2.16
PTOV1-209	ENST00000597793	CAMSAP1	Q5T5Y3	1602 aa		28.5	■■■□□ 2.15
PTOV1-209	ENST00000597793	PZP	P20742	1482 aa		28.48	■■■□□ 2.15
PTOV1-209	ENST00000597793	EFCAB6	Q5THR3	1501 aa		28.47	■■■□□ 2.15
PTOV1-209	ENST00000597793	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.46	■■■□□ 2.15
PTOV1-209	ENST00000597793	ARHGAP31	Q2M1Z3	1444 aa		28.46	■■■□□ 2.15
PTOV1-209	ENST00000597793	RIMS1	Q86UR5	1692 aa	Known RBP	28.46	■■■□□ 2.15
PTOV1-209	ENST00000597793	RPRD2	Q5VT52	1461 aa	Known RBP	28.44	■■■□□ 2.14
PTOV1-209	ENST00000597793	MPHOSPH9	Q99550	1183 aa		28.44	■■■□□ 2.14
PTOV1-209	ENST00000597793	ZMYM3	Q14202	1370 aa		28.44	■■■□□ 2.14
PTOV1-209	ENST00000597793	CLSPN	Q9HAW4	1339 aa		28.41	■■■□□ 2.14
PTOV1-209	ENST00000597793		E9PCH4	1651 aa		28.4	■■■□□ 2.14
PTOV1-209	ENST00000597793	C3	P01024	1663 aa		28.39	■■■□□ 2.14
PTOV1-209	ENST00000597793	NPAT	Q14207	1427 aa		28.38	■■■□□ 2.13
PTOV1-209	ENST00000597793	KDM4F	A0A1W2PPD8	638 aa		28.37	■■■□□ 2.13
PTOV1-209	ENST00000597793	PKD2	Q13563	968 aa		28.36	■■■□□ 2.13
PTOV1-209	ENST00000597793	PTPRM	P28827	1452 aa		28.35	■■■□□ 2.13
PTOV1-209	ENST00000597793	PREX1	Q8TCU6	1659 aa		28.32	■■■□□ 2.12
PTOV1-209	ENST00000597793	DHX57	Q6P158	1386 aa	Known RBP	28.32	■■■□□ 2.12
PTOV1-209	ENST00000597793	SPATA31D1	Q6ZQQ2	1576 aa		28.3	■■■□□ 2.12
PTOV1-209	ENST00000597793	CFAP65	Q6ZU64	1925 aa	Known RBP	28.29	■■■□□ 2.12
PTOV1-209	ENST00000597793	ERVK-7	P63135	1459 aa		28.29	■■■□□ 2.12
PTOV1-209	ENST00000597793	SPHKAP	Q2M3C7	1700 aa		28.29	■■■□□ 2.12
PTOV1-209	ENST00000597793	NOS1	P29475	1434 aa		28.27	■■■□□ 2.12
PTOV1-209	ENST00000597793	PTPRT	O14522	1441 aa		28.26	■■■□□ 2.11
PTOV1-209	ENST00000597793	CEBPA	P49715	358 aa	Predicted RBP	28.26	■■■□□ 2.11
PTOV1-209	ENST00000597793	SETD1B	Q9UPS6	1966 aa	Known RBP	28.23	■■■□□ 2.11
PTOV1-209	ENST00000597793	TRPM2	O94759	1503 aa		28.23	■■■□□ 2.11
PTOV1-209	ENST00000597793	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.23	■■■□□ 2.11
PTOV1-209	ENST00000597793	FOXD1	Q16676	465 aa		28.21	■■■□□ 2.11
PTOV1-209	ENST00000597793	TNR	Q92752	1358 aa		28.2	■■■□□ 2.11
PTOV1-209	ENST00000597793	SYNM	O15061	1565 aa		28.19	■■■□□ 2.1
PTOV1-209	ENST00000597793	PLPPR3	Q6T4P5	718 aa		28.18	■■■□□ 2.1
PTOV1-209	ENST00000597793	SLC52A1	Q9NWF4	448 aa		28.18	■■■□□ 2.1
PTOV1-209	ENST00000597793	ANKRD30B	Q9BXX2	1392 aa		28.18	■■■□□ 2.1
PTOV1-209	ENST00000597793	PLA2R1	Q13018	1463 aa		28.17	■■■□□ 2.1
PTOV1-209	ENST00000597793	NLRP1	Q9C000	1473 aa		28.16	■■■□□ 2.1
PTOV1-209	ENST00000597793	PIK3C2B	O00750	1634 aa		28.16	■■■□□ 2.1
PTOV1-209	ENST00000597793	CCDC144A	A2RUR9	1427 aa		28.15	■■■□□ 2.1
PTOV1-209	ENST00000597793	MYO3A	Q8NEV4	1616 aa		28.12	■■■□□ 2.09
PTOV1-209	ENST00000597793	CLTCL1	P53675	1640 aa		28.1	■■■□□ 2.09
PTOV1-209	ENST00000597793	KDM5A	P29375	1690 aa	Known RBP	28.09	■■■□□ 2.09
PTOV1-209	ENST00000597793	KIF1B	O60333	1816 aa		28.08	■■■□□ 2.08
PTOV1-209	ENST00000597793	UHRF1BP1	Q6BDS2	1440 aa		28.07	■■■□□ 2.08
PTOV1-209	ENST00000597793	IDI1	Q13907	227 aa		28.07	■■■□□ 2.08
PTOV1-209	ENST00000597793	ZNF142	P52746	1687 aa	Predicted RBP	28.07	■■■□□ 2.08
PTOV1-209	ENST00000597793	UGGT1	Q9NYU2	1555 aa		28.07	■■■□□ 2.08
PTOV1-209	ENST00000597793	A2ML1	A8K2U0	1454 aa		28.05	■■■□□ 2.08
PTOV1-209	ENST00000597793	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.04	■■■□□ 2.08
PTOV1-209	ENST00000597793	NEURL4	Q96JN8	1562 aa		28.03	■■■□□ 2.08
PTOV1-209	ENST00000597793	ADGRB3	O60242	1522 aa		28.02	■■■□□ 2.08
PTOV1-209	ENST00000597793	STAG3	Q9UJ98	1225 aa		28.01	■■■□□ 2.07
PTOV1-209	ENST00000597793	TMEM131L	A2VDJ0	1609 aa		28	■■■□□ 2.07
PTOV1-209	ENST00000597793	UBR1	Q8IWV7	1749 aa		28	■■■□□ 2.07
PTOV1-209	ENST00000597793	THEMIS	Q8N1K5	641 aa	Predicted RBP	27.95	■■■□□ 2.07
PTOV1-209	ENST00000597793	CHGA	P10645	457 aa	Known RBP	27.95	■■■□□ 2.06
PTOV1-209	ENST00000597793	SPATA31E1	Q6ZUB1	1445 aa		27.94	■■■□□ 2.06
PTOV1-209	ENST00000597793	MYO5B	Q9ULV0	1848 aa		27.94	■■■□□ 2.06
PTOV1-209	ENST00000597793	SIN3A	Q96ST3	1273 aa		27.92	■■■□□ 2.06
PTOV1-209	ENST00000597793	LMTK3	Q96Q04	1460 aa		27.91	■■■□□ 2.06
PTOV1-209	ENST00000597793	NEUROD1	Q13562	356 aa		27.89	■■■□□ 2.06
PTOV1-209	ENST00000597793	AEBP2	Q6ZN18	517 aa	Predicted RBP	27.89	■■■□□ 2.06
PTOV1-209	ENST00000597793	RPGRIP1L	Q68CZ1	1315 aa		27.89	■■■□□ 2.05
PTOV1-209	ENST00000597793	ZNF326	Q5BKZ1	582 aa	Known RBP	27.87	■■■□□ 2.05
PTOV1-209	ENST00000597793	SLIT1	O75093	1534 aa		27.87	■■■□□ 2.05
PTOV1-209	ENST00000597793	HDGF	P51858	240 aa	Known RBP	27.87	■■■□□ 2.05
PTOV1-209	ENST00000597793	TMEM2	Q9UHN6	1383 aa		27.85	■■■□□ 2.05
PTOV1-209	ENST00000597793	ARHGAP23	Q9P227	1491 aa		27.84	■■■□□ 2.05
PTOV1-209	ENST00000597793	RGL3	Q3MIN7	710 aa		27.84	■■■□□ 2.05
PTOV1-209	ENST00000597793	TIMELESS	Q9UNS1	1208 aa		27.84	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms