RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 POLR1AO95602 1720 aaPredicted RBP26.62■■□□□ 1.85
C19orf54-207ENST00000597507 SHANK2Q9UPX8 1470 aa26.61■■□□□ 1.85
C19orf54-207ENST00000597507 MTUS2Q5JR59 1369 aa26.6■■□□□ 1.85
C19orf54-207ENST00000597507 DHX29Q7Z478 1369 aaKnown RBP26.6■■□□□ 1.85
C19orf54-207ENST00000597507 CPS1P31327 1500 aa26.59■■□□□ 1.85
C19orf54-207ENST00000597507 TNRQ92752 1358 aa26.58■■□□□ 1.85
C19orf54-207ENST00000597507 RTEL1-TNFRSF6BF6WH68 1400 aa26.57■■□□□ 1.84
C19orf54-207ENST00000597507 TIAM1Q13009 1591 aa26.57■■□□□ 1.84
C19orf54-207ENST00000597507 KIF3BO15066 747 aa26.56■■□□□ 1.84
C19orf54-207ENST00000597507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.54■■□□□ 1.84
C19orf54-207ENST00000597507 ANKLE2Q86XL3 938 aa26.53■■□□□ 1.84
C19orf54-207ENST00000597507 PZPP20742 1482 aa26.53■■□□□ 1.84
C19orf54-207ENST00000597507 VWDEQ8N2E2 1590 aa26.52■■□□□ 1.84
C19orf54-207ENST00000597507 ALKQ9UM73 1620 aa26.5■■□□□ 1.83
C19orf54-207ENST00000597507 WASHC2CQ9Y4E1 1318 aa26.5■■□□□ 1.83
C19orf54-207ENST00000597507 THEMISQ8N1K5 641 aaPredicted RBP26.49■■□□□ 1.83
C19orf54-207ENST00000597507 KDM5DQ9BY66 1539 aa26.49■■□□□ 1.83
C19orf54-207ENST00000597507 MIA2Q96PC5 1412 aa26.48■■□□□ 1.83
C19orf54-207ENST00000597507 MED14O60244 1454 aa26.45■■□□□ 1.82
C19orf54-207ENST00000597507 NPHP4O75161 1426 aaPredicted RBP26.45■■□□□ 1.82
C19orf54-207ENST00000597507 EHBP1L1Q8N3D4 1523 aa26.44■■□□□ 1.82
C19orf54-207ENST00000597507 CEP162Q5TB80 1403 aa26.44■■□□□ 1.82
C19orf54-207ENST00000597507 UGGT1Q9NYU2 1555 aa26.43■■□□□ 1.82
C19orf54-207ENST00000597507 PHF23Q9BUL5 403 aaPredicted RBP26.43■■□□□ 1.82
C19orf54-207ENST00000597507 FAM135AQ9P2D6 1515 aa26.43■■□□□ 1.82
C19orf54-207ENST00000597507 CCDC141Q6ZP82 1450 aa26.42■■□□□ 1.82
C19orf54-207ENST00000597507 NLRP1Q9C000 1473 aa26.42■■□□□ 1.82
C19orf54-207ENST00000597507 DEPDC5O75140 1603 aa26.42■■□□□ 1.82
C19orf54-207ENST00000597507 STRCP1A6NGW2 1772 aa26.41■■□□□ 1.82
C19orf54-207ENST00000597507 SENP3Q9H4L4 574 aaPredicted RBP26.4■■□□□ 1.82
C19orf54-207ENST00000597507 RSPH4AQ5TD94 716 aa26.38■■□□□ 1.81
C19orf54-207ENST00000597507 IQGAP1P46940 1657 aa26.38■■□□□ 1.81
C19orf54-207ENST00000597507 CAMSAP2Q08AD1 1489 aa26.37■■□□□ 1.81
C19orf54-207ENST00000597507 LRRC7Q96NW7 1537 aa26.35■■□□□ 1.81
C19orf54-207ENST00000597507 NCOA2Q15596 1464 aa26.33■■□□□ 1.81
C19orf54-207ENST00000597507 CFAP65Q6ZU64 1925 aaKnown RBP26.31■■□□□ 1.8
C19orf54-207ENST00000597507 TSPY4P0CV99 314 aa26.3■■□□□ 1.8
C19orf54-207ENST00000597507 TSPY10P0CW01 314 aa26.3■■□□□ 1.8
C19orf54-207ENST00000597507 ABCC3O15438 1527 aa26.28■■□□□ 1.8
C19orf54-207ENST00000597507 ARHGEF5Q12774 1597 aa26.28■■□□□ 1.8
C19orf54-207ENST00000597507 RGS17Q9UGC6 210 aaPredicted RBP26.27■■□□□ 1.8
C19orf54-207ENST00000597507 RNF17Q9BXT8 1623 aaKnown RBP26.27■■□□□ 1.8
C19orf54-207ENST00000597507 ZC3H13Q5T200 1668 aaKnown RBP26.25■■□□□ 1.79
C19orf54-207ENST00000597507 SYNMO15061 1565 aa26.24■■□□□ 1.79
C19orf54-207ENST00000597507 ERVK-7P63135 1459 aa26.24■■□□□ 1.79
C19orf54-207ENST00000597507 UBR1Q8IWV7 1749 aa26.21■■□□□ 1.79
C19orf54-207ENST00000597507 LTKP29376 864 aa26.2■■□□□ 1.78
C19orf54-207ENST00000597507 XIRP1Q702N8 1843 aaKnown RBP26.19■■□□□ 1.78
C19orf54-207ENST00000597507 MROH1Q8NDA8 1641 aa26.18■■□□□ 1.78
C19orf54-207ENST00000597507 SCAF11Q99590 1463 aaKnown RBP26.17■■□□□ 1.78
C19orf54-207ENST00000597507 CEP152O94986 1710 aa26.17■■□□□ 1.78
C19orf54-207ENST00000597507 MAST1Q9Y2H9 1570 aa26.16■■□□□ 1.78
C19orf54-207ENST00000597507 TXNDC2Q86VQ3 553 aa26.16■■□□□ 1.78
C19orf54-207ENST00000597507 EIF2AK4Q9P2K8 1649 aaKnown RBP26.15■■□□□ 1.78
C19orf54-207ENST00000597507 ARHGAP23Q9P227 1491 aa26.14■■□□□ 1.78
C19orf54-207ENST00000597507 SLIT1O75093 1534 aa26.11■■□□□ 1.77
C19orf54-207ENST00000597507 LRRC9Q6ZRR7 1453 aa26.07■■□□□ 1.76
C19orf54-207ENST00000597507 POTEAQ6S8J7 498 aa26.07■■□□□ 1.76
C19orf54-207ENST00000597507 FAM135BQ49AJ0 1406 aa26.06■■□□□ 1.76
C19orf54-207ENST00000597507 EID1Q9Y6B2 187 aa26.06■■□□□ 1.76
C19orf54-207ENST00000597507 ARHGAP31Q2M1Z3 1444 aa26.05■■□□□ 1.76
C19orf54-207ENST00000597507 DUOX2Q9NRD8 1548 aa26.04■■□□□ 1.76
C19orf54-207ENST00000597507 KANK4Q5T7N3 995 aaPredicted RBP26.03■■□□□ 1.76
C19orf54-207ENST00000597507 PIK3C2BO00750 1634 aa26.02■■□□□ 1.76
C19orf54-207ENST00000597507 TMEM2Q9UHN6 1383 aa26.01■■□□□ 1.75
C19orf54-207ENST00000597507 TMEM94Q12767 1356 aa26■■□□□ 1.75
C19orf54-207ENST00000597507 RBM33Q96EV2 1170 aaKnown RBP25.99■■□□□ 1.75
C19orf54-207ENST00000597507 PRDM15P57071 1507 aaPredicted RBP25.98■■□□□ 1.75
C19orf54-207ENST00000597507 MYOM3Q5VTT5 1437 aa25.98■■□□□ 1.75
C19orf54-207ENST00000597507 KCNA6P17658 529 aa25.97■■□□□ 1.75
C19orf54-207ENST00000597507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.97■■□□□ 1.75
C19orf54-207ENST00000597507 RRP7BPQ9NSQ0 103 aa25.96■■□□□ 1.75
C19orf54-207ENST00000597507 STAG3Q9UJ98 1225 aa25.96■■□□□ 1.75
C19orf54-207ENST00000597507 ROBO1Q9Y6N7 1651 aa25.96■■□□□ 1.75
C19orf54-207ENST00000597507 KIF15Q9NS87 1388 aa25.95■■□□□ 1.75
C19orf54-207ENST00000597507 IDI1Q13907 227 aa25.95■■□□□ 1.74
C19orf54-207ENST00000597507 SLC26A8Q96RN1 970 aa25.95■■□□□ 1.74
C19orf54-207ENST00000597507 PROSER2Q86WR7 435 aaPredicted RBP25.94■■□□□ 1.74
C19orf54-207ENST00000597507 VPS8Q8N3P4 1428 aa25.93■■□□□ 1.74
C19orf54-207ENST00000597507 MAP3K1Q13233 1512 aa25.93■■□□□ 1.74
C19orf54-207ENST00000597507 TET3O43151 1660 aa25.93■■□□□ 1.74
C19orf54-207ENST00000597507 ERBINQ96RT1 1412 aa25.91■■□□□ 1.74
C19orf54-207ENST00000597507 EFCAB6Q5THR3 1501 aa25.91■■□□□ 1.74
C19orf54-207ENST00000597507 ABCC5O15440 1437 aa25.9■■□□□ 1.74
C19orf54-207ENST00000597507 KDM5AP29375 1690 aaKnown RBP25.9■■□□□ 1.74
C19orf54-207ENST00000597507 CROCC2H7BZ55 1655 aa25.87■■□□□ 1.73
C19orf54-207ENST00000597507 SETD1AO15047 1707 aaKnown RBP25.85■■□□□ 1.73
C19orf54-207ENST00000597507 KANK1Q14678 1352 aa25.84■■□□□ 1.73
C19orf54-207ENST00000597507 SLAIN2Q9P270 581 aa25.83■■□□□ 1.73
C19orf54-207ENST00000597507 LMTK2Q8IWU2 1503 aa25.82■■□□□ 1.72
C19orf54-207ENST00000597507 NWD1Q149M9 1564 aa25.82■■□□□ 1.72
C19orf54-207ENST00000597507 NKTRP30414 1462 aaKnown RBP25.81■■□□□ 1.72
C19orf54-207ENST00000597507 PHLPP1O60346 1717 aa25.81■■□□□ 1.72
C19orf54-207ENST00000597507 LOC105371045A0A1W2PR82 267 aa25.8■■□□□ 1.72
C19orf54-207ENST00000597507 MSH6P52701 1360 aa25.8■■□□□ 1.72
C19orf54-207ENST00000597507 NOS1P29475 1434 aa25.8■■□□□ 1.72
C19orf54-207ENST00000597507 PTPN23Q9H3S7 1636 aa25.79■■□□□ 1.72
C19orf54-207ENST00000597507 BCANQ96GW7 911 aa25.79■■□□□ 1.72
C19orf54-207ENST00000597507 DAPK1P53355 1430 aa25.79■■□□□ 1.72
C19orf54-207ENST00000597507 CHIC2Q9UKJ5 165 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms