RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 CAMSAP1Q5T5Y3 1602 aa21.95■■□□□ 1.1
C19orf54-206ENST00000596940 NCKAP5LQ9HCH0 1330 aa21.94■■□□□ 1.1
C19orf54-206ENST00000596940 PLA2R1Q13018 1463 aa21.94■■□□□ 1.1
C19orf54-206ENST00000596940 TNRQ92752 1358 aa21.93■■□□□ 1.1
C19orf54-206ENST00000596940 KDM5DQ9BY66 1539 aa21.93■■□□□ 1.1
C19orf54-206ENST00000596940 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
C19orf54-206ENST00000596940 A2ML1A8K2U0 1454 aa21.9■■□□□ 1.1
C19orf54-206ENST00000596940 PZPP20742 1482 aa21.9■■□□□ 1.1
C19orf54-206ENST00000596940 CEP170BQ9Y4F5 1589 aaPredicted RBP21.9■■□□□ 1.1
C19orf54-206ENST00000596940 MAST1Q9Y2H9 1570 aa21.89■■□□□ 1.09
C19orf54-206ENST00000596940 THEMISQ8N1K5 641 aaPredicted RBP21.88■■□□□ 1.09
C19orf54-206ENST00000596940 MYO3AQ8NEV4 1616 aa21.88■■□□□ 1.09
C19orf54-206ENST00000596940 TCOF1Q13428 1488 aaKnown RBP21.86■■□□□ 1.09
C19orf54-206ENST00000596940 ZNF142P52746 1687 aaPredicted RBP21.85■■□□□ 1.09
C19orf54-206ENST00000596940 IQSEC2Q5JU85 1478 aa21.83■■□□□ 1.09
C19orf54-206ENST00000596940 ANKLE2Q86XL3 938 aa21.83■■□□□ 1.09
C19orf54-206ENST00000596940 NLRP1Q9C000 1473 aa21.83■■□□□ 1.08
C19orf54-206ENST00000596940 DUOX2Q9NRD8 1548 aa21.82■■□□□ 1.08
C19orf54-206ENST00000596940 KIF15Q9NS87 1388 aa21.82■■□□□ 1.08
C19orf54-206ENST00000596940 LTBP4Q8N2S1 1624 aa21.81■■□□□ 1.08
C19orf54-206ENST00000596940 RRP7BPQ9NSQ0 103 aa21.81■■□□□ 1.08
C19orf54-206ENST00000596940 SHANK2Q9UPX8 1470 aa21.81■■□□□ 1.08
C19orf54-206ENST00000596940 ZNF335Q9H4Z2 1342 aaPredicted RBP21.8■■□□□ 1.08
C19orf54-206ENST00000596940 ABCC5O15440 1437 aa21.8■■□□□ 1.08
C19orf54-206ENST00000596940 FGD6Q6ZV73 1430 aa21.8■■□□□ 1.08
C19orf54-206ENST00000596940 DNMT1P26358 1616 aaKnown RBP21.78■■□□□ 1.08
C19orf54-206ENST00000596940 EIF2AK4Q9P2K8 1649 aaKnown RBP21.78■■□□□ 1.08
C19orf54-206ENST00000596940 RNF17Q9BXT8 1623 aaKnown RBP21.77■■□□□ 1.08
C19orf54-206ENST00000596940 ABCC3O15438 1527 aa21.77■■□□□ 1.08
C19orf54-206ENST00000596940 ERBINQ96RT1 1412 aa21.77■■□□□ 1.08
C19orf54-206ENST00000596940 ANKRD30AQ9BXX3 1397 aa21.76■■□□□ 1.07
C19orf54-206ENST00000596940 DAPK1P53355 1430 aa21.76■■□□□ 1.07
C19orf54-206ENST00000596940 PTPN23Q9H3S7 1636 aa21.76■■□□□ 1.07
C19orf54-206ENST00000596940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.75■■□□□ 1.07
C19orf54-206ENST00000596940 KANK1Q14678 1352 aa21.74■■□□□ 1.07
C19orf54-206ENST00000596940 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
C19orf54-206ENST00000596940 ZC3H13Q5T200 1668 aaKnown RBP21.72■■□□□ 1.07
C19orf54-206ENST00000596940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.72■■□□□ 1.07
C19orf54-206ENST00000596940 CHIC2Q9UKJ5 165 aa21.72■■□□□ 1.07
C19orf54-206ENST00000596940 UBAP1LF5GYI3 381 aa21.71■■□□□ 1.07
C19orf54-206ENST00000596940 ERVK-7P63135 1459 aa21.71■■□□□ 1.07
C19orf54-206ENST00000596940 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
C19orf54-206ENST00000596940 ARHGAP31Q2M1Z3 1444 aa21.7■■□□□ 1.06
C19orf54-206ENST00000596940 SPATA31D1Q6ZQQ2 1576 aa21.69■■□□□ 1.06
C19orf54-206ENST00000596940 NPHP4O75161 1426 aaPredicted RBP21.67■■□□□ 1.06
C19orf54-206ENST00000596940 MROH1Q8NDA8 1641 aa21.66■■□□□ 1.06
C19orf54-206ENST00000596940 MED14O60244 1454 aa21.66■■□□□ 1.06
C19orf54-206ENST00000596940 PRDM15P57071 1507 aaPredicted RBP21.65■■□□□ 1.06
C19orf54-206ENST00000596940 CPS1P31327 1500 aa21.64■■□□□ 1.05
C19orf54-206ENST00000596940 TOM1O60784 492 aa21.63■■□□□ 1.05
C19orf54-206ENST00000596940 STAG3Q9UJ98 1225 aa21.63■■□□□ 1.05
C19orf54-206ENST00000596940 EID1Q9Y6B2 187 aa21.63■■□□□ 1.05
C19orf54-206ENST00000596940 CROCC2H7BZ55 1655 aa21.63■■□□□ 1.05
C19orf54-206ENST00000596940 NEURL4Q96JN8 1562 aa21.61■■□□□ 1.05
C19orf54-206ENST00000596940 DEPDC5O75140 1603 aa21.61■■□□□ 1.05
C19orf54-206ENST00000596940 ADGRL2O95490 1459 aa21.59■■□□□ 1.05
C19orf54-206ENST00000596940 POLR1AO95602 1720 aaPredicted RBP21.59■■□□□ 1.05
C19orf54-206ENST00000596940 TXNDC2Q86VQ3 553 aa21.59■■□□□ 1.05
C19orf54-206ENST00000596940 LMTK2Q8IWU2 1503 aa21.57■■□□□ 1.04
C19orf54-206ENST00000596940 DISP3Q9P2K9 1392 aa21.57■■□□□ 1.04
C19orf54-206ENST00000596940 ANKRD50Q9ULJ7 1429 aa21.56■■□□□ 1.04
C19orf54-206ENST00000596940 CEP152O94986 1710 aa21.56■■□□□ 1.04
C19orf54-206ENST00000596940 SLC52A1Q9NWF4 448 aa21.55■■□□□ 1.04
C19orf54-206ENST00000596940 SCAF11Q99590 1463 aaKnown RBP21.54■■□□□ 1.04
C19orf54-206ENST00000596940 IDI1Q13907 227 aa21.54■■□□□ 1.04
C19orf54-206ENST00000596940 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
C19orf54-206ENST00000596940 LTKP29376 864 aa21.53■■□□□ 1.04
C19orf54-206ENST00000596940 TMEM2Q9UHN6 1383 aa21.52■■□□□ 1.04
C19orf54-206ENST00000596940 VWDEQ8N2E2 1590 aa21.52■■□□□ 1.04
C19orf54-206ENST00000596940 ARHGAP23Q9P227 1491 aa21.52■■□□□ 1.03
C19orf54-206ENST00000596940 SLIT1O75093 1534 aa21.51■■□□□ 1.03
C19orf54-206ENST00000596940 PIP4K2BP78356 416 aa21.51■■□□□ 1.03
C19orf54-206ENST00000596940 IQGAP1P46940 1657 aa21.5■■□□□ 1.03
C19orf54-206ENST00000596940 ROCK1Q13464 1354 aa21.48■■□□□ 1.03
C19orf54-206ENST00000596940 UBR1Q8IWV7 1749 aa21.48■■□□□ 1.03
C19orf54-206ENST00000596940 NOS1P29475 1434 aa21.47■■□□□ 1.03
C19orf54-206ENST00000596940 RPRD2Q5VT52 1461 aaKnown RBP21.47■■□□□ 1.03
C19orf54-206ENST00000596940 HDGFP51858 240 aaKnown RBP21.47■■□□□ 1.03
C19orf54-206ENST00000596940 CFAP65Q6ZU64 1925 aaKnown RBP21.47■■□□□ 1.03
C19orf54-206ENST00000596940 EFCAB6Q5THR3 1501 aa21.45■■□□□ 1.02
C19orf54-206ENST00000596940 HSPA1LP34931 641 aa21.42■■□□□ 1.02
C19orf54-206ENST00000596940 LRRC7Q96NW7 1537 aa21.42■■□□□ 1.02
C19orf54-206ENST00000596940 PIK3C2BO00750 1634 aa21.41■■□□□ 1.02
C19orf54-206ENST00000596940 ITGAEP38570 1179 aa21.41■■□□□ 1.02
C19orf54-206ENST00000596940 BCANQ96GW7 911 aa21.41■■□□□ 1.02
C19orf54-206ENST00000596940 KDM5AP29375 1690 aaKnown RBP21.4■■□□□ 1.02
C19orf54-206ENST00000596940 KCNA6P17658 529 aa21.39■■□□□ 1.01
C19orf54-206ENST00000596940 PPARGC1BQ86YN6 1023 aaKnown RBP21.38■■□□□ 1.01
C19orf54-206ENST00000596940 SYNMO15061 1565 aa21.37■■□□□ 1.01
C19orf54-206ENST00000596940 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
C19orf54-206ENST00000596940 SLC26A8Q96RN1 970 aa21.37■■□□□ 1.01
C19orf54-206ENST00000596940 NUP155O75694 1391 aa21.36■■□□□ 1.01
C19orf54-206ENST00000596940 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.36■■□□□ 1.01
C19orf54-206ENST00000596940 ADGRB3O60242 1522 aa21.35■■□□□ 1.01
C19orf54-206ENST00000596940 ILDR2Q71H61 639 aa21.35■■□□□ 1.01
C19orf54-206ENST00000596940 TET3O43151 1660 aa21.34■■□□□ 1.01
C19orf54-206ENST00000596940 CHGAP10645 457 aaKnown RBP21.33■■□□□ 1.01
C19orf54-206ENST00000596940 PROSER2Q86WR7 435 aaPredicted RBP21.32■■□□□ 1
C19orf54-206ENST00000596940 UNC13BO14795 1591 aa21.31■■□□□ 1
C19orf54-206ENST00000596940 SOCS7O14512 581 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms