RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 RNF17Q9BXT8 1623 aaKnown RBP32.51■■■□□ 2.79
PNKP-209ENST00000596726 FAM135AQ9P2D6 1515 aa32.51■■■□□ 2.79
PNKP-209ENST00000596726 RRP7BPQ9NSQ0 103 aa32.48■■■□□ 2.79
PNKP-209ENST00000596726 CHIC2Q9UKJ5 165 aa32.47■■■□□ 2.79
PNKP-209ENST00000596726 ADGRL2O95490 1459 aa32.47■■■□□ 2.79
PNKP-209ENST00000596726 ANKRD30AQ9BXX3 1397 aa32.46■■■□□ 2.79
PNKP-209ENST00000596726 NPATQ14207 1427 aa32.46■■■□□ 2.79
PNKP-209ENST00000596726 NCOA1Q15788 1441 aa32.46■■■□□ 2.79
PNKP-209ENST00000596726 KDM5DQ9BY66 1539 aa32.46■■■□□ 2.79
PNKP-209ENST00000596726 ERBINQ96RT1 1412 aa32.44■■■□□ 2.78
PNKP-209ENST00000596726 MROH1Q8NDA8 1641 aa32.43■■■□□ 2.78
PNKP-209ENST00000596726 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.42■■■□□ 2.78
PNKP-209ENST00000596726 UHRF1BP1Q6BDS2 1440 aa32.42■■■□□ 2.78
PNKP-209ENST00000596726 PTPRKQ15262 1439 aa32.41■■■□□ 2.78
PNKP-209ENST00000596726 HSPA2P54652 639 aa32.4■■■□□ 2.78
PNKP-209ENST00000596726 WASHC2CQ9Y4E1 1318 aa32.4■■■□□ 2.78
PNKP-209ENST00000596726 ZC3H13Q5T200 1668 aaKnown RBP32.36■■■□□ 2.77
PNKP-209ENST00000596726 ABCC3O15438 1527 aa32.35■■■□□ 2.77
PNKP-209ENST00000596726 DEPDC5O75140 1603 aa32.33■■■□□ 2.77
PNKP-209ENST00000596726 PZPP20742 1482 aa32.33■■■□□ 2.77
PNKP-209ENST00000596726 RRBP1Q9P2E9 1410 aaKnown RBP32.33■■■□□ 2.77
PNKP-209ENST00000596726 PRDM15P57071 1507 aaPredicted RBP32.32■■■□□ 2.76
PNKP-209ENST00000596726 CEP152O94986 1710 aa32.3■■■□□ 2.76
PNKP-209ENST00000596726 ROCK1Q13464 1354 aa32.28■■■□□ 2.76
PNKP-209ENST00000596726 MYO3AQ8NEV4 1616 aa32.27■■■□□ 2.76
PNKP-209ENST00000596726 FBXO31Q5XUX0 539 aaPredicted RBP32.26■■■□□ 2.75
PNKP-209ENST00000596726 ANKRD50Q9ULJ7 1429 aa32.25■■■□□ 2.75
PNKP-209ENST00000596726 ZNF142P52746 1687 aaPredicted RBP32.24■■■□□ 2.75
PNKP-209ENST00000596726 CAMSAP1Q5T5Y3 1602 aa32.24■■■□□ 2.75
PNKP-209ENST00000596726 STRCQ7RTU9 1775 aa32.22■■■□□ 2.75
PNKP-209ENST00000596726 VWDEQ8N2E2 1590 aa32.21■■■□□ 2.75
PNKP-209ENST00000596726 ITGAEP38570 1179 aa32.2■■■□□ 2.75
PNKP-209ENST00000596726 TNRQ92752 1358 aa32.19■■■□□ 2.74
PNKP-209ENST00000596726 CEP170BQ9Y4F5 1589 aaPredicted RBP32.19■■■□□ 2.74
PNKP-209ENST00000596726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.19■■■□□ 2.74
PNKP-209ENST00000596726 KANK1Q14678 1352 aa32.18■■■□□ 2.74
PNKP-209ENST00000596726 ARHGAP31Q2M1Z3 1444 aa32.17■■■□□ 2.74
PNKP-209ENST00000596726 LMTK2Q8IWU2 1503 aa32.16■■■□□ 2.74
PNKP-209ENST00000596726 CFAP65Q6ZU64 1925 aaKnown RBP32.16■■■□□ 2.74
PNKP-209ENST00000596726 SPATA31D1Q6ZQQ2 1576 aa32.16■■■□□ 2.74
PNKP-209ENST00000596726 A2ML1A8K2U0 1454 aa32.15■■■□□ 2.74
PNKP-209ENST00000596726 ERVK-7P63135 1459 aa32.13■■■□□ 2.73
PNKP-209ENST00000596726 UNC13BO14795 1591 aa32.09■■■□□ 2.73
PNKP-209ENST00000596726 NLRP1Q9C000 1473 aa32.09■■■□□ 2.73
PNKP-209ENST00000596726 PLA2R1Q13018 1463 aa32.06■■■□□ 2.72
PNKP-209ENST00000596726 DMRT2Q9Y5R5 561 aa32.04■■■□□ 2.72
PNKP-209ENST00000596726 EFCAB6Q5THR3 1501 aa32.04■■■□□ 2.72
PNKP-209ENST00000596726 PTPRTO14522 1441 aa32.01■■■□□ 2.72
PNKP-209ENST00000596726 TET3O43151 1660 aa31.99■■■□□ 2.71
PNKP-209ENST00000596726 UGGT1Q9NYU2 1555 aa31.98■■■□□ 2.71
PNKP-209ENST00000596726 IQGAP3Q86VI3 1631 aa31.97■■■□□ 2.71
PNKP-209ENST00000596726 NAIPQ13075 1403 aa31.96■■■□□ 2.71
PNKP-209ENST00000596726 PKD2Q13563 968 aa31.96■■■□□ 2.71
PNKP-209ENST00000596726 NCKAP5LQ9HCH0 1330 aa31.96■■■□□ 2.71
PNKP-209ENST00000596726 GCC2Q8IWJ2 1684 aa31.95■■■□□ 2.71
PNKP-209ENST00000596726 THEMISQ8N1K5 641 aaPredicted RBP31.94■■■□□ 2.7
PNKP-209ENST00000596726 RPRD2Q5VT52 1461 aaKnown RBP31.94■■■□□ 2.7
PNKP-209ENST00000596726 NOS1P29475 1434 aa31.93■■■□□ 2.7
PNKP-209ENST00000596726 UBR1Q8IWV7 1749 aa31.92■■■□□ 2.7
PNKP-209ENST00000596726 SYNMO15061 1565 aa31.9■■■□□ 2.7
PNKP-209ENST00000596726 NUP155O75694 1391 aa31.9■■■□□ 2.7
PNKP-209ENST00000596726 HFM1A2PYH4 1435 aa31.9■■■□□ 2.7
PNKP-209ENST00000596726 POLR1AO95602 1720 aaPredicted RBP31.89■■■□□ 2.7
PNKP-209ENST00000596726 E9PCH4 1651 aa31.87■■■□□ 2.69
PNKP-209ENST00000596726 PIK3C2BO00750 1634 aa31.86■■■□□ 2.69
PNKP-209ENST00000596726 NEURL4Q96JN8 1562 aa31.84■■■□□ 2.69
PNKP-209ENST00000596726 IDI1Q13907 227 aa31.83■■■□□ 2.69
PNKP-209ENST00000596726 KDM5AP29375 1690 aaKnown RBP31.83■■■□□ 2.69
PNKP-209ENST00000596726 ANKLE2Q86XL3 938 aa31.82■■■□□ 2.68
PNKP-209ENST00000596726 SLC52A1Q9NWF4 448 aa31.79■■■□□ 2.68
PNKP-209ENST00000596726 MED14O60244 1454 aa31.78■■■□□ 2.68
PNKP-209ENST00000596726 ARHGAP23Q9P227 1491 aa31.78■■■□□ 2.68
PNKP-209ENST00000596726 SLIT1O75093 1534 aa31.77■■■□□ 2.68
PNKP-209ENST00000596726 LTBP4Q8N2S1 1624 aa31.74■■■□□ 2.67
PNKP-209ENST00000596726 CERKQ8TCT0 537 aa31.73■■■□□ 2.67
PNKP-209ENST00000596726 ADGRB3O60242 1522 aa31.72■■■□□ 2.67
PNKP-209ENST00000596726 STAG3Q9UJ98 1225 aa31.71■■■□□ 2.67
PNKP-209ENST00000596726 NPHP4O75161 1426 aaPredicted RBP31.71■■■□□ 2.67
PNKP-209ENST00000596726 TMEM2Q9UHN6 1383 aa31.69■■■□□ 2.66
PNKP-209ENST00000596726 SCAF11Q99590 1463 aaKnown RBP31.69■■■□□ 2.66
PNKP-209ENST00000596726 IQGAP1P46940 1657 aa31.68■■■□□ 2.66
PNKP-209ENST00000596726 LTKP29376 864 aa31.68■■■□□ 2.66
PNKP-209ENST00000596726 ILDR1Q86SU0 546 aaPredicted RBP31.67■■■□□ 2.66
PNKP-209ENST00000596726 MYO5BQ9ULV0 1848 aa31.67■■■□□ 2.66
PNKP-209ENST00000596726 ZNF335Q9H4Z2 1342 aaPredicted RBP31.66■■■□□ 2.66
PNKP-209ENST00000596726 SPHKAPQ2M3C7 1700 aa31.66■■■□□ 2.66
PNKP-209ENST00000596726 TMEM131LA2VDJ0 1609 aa31.65■■■□□ 2.66
PNKP-209ENST00000596726 TXNDC2Q86VQ3 553 aa31.65■■■□□ 2.66
PNKP-209ENST00000596726 TRIM52Q96A61 297 aa31.64■■■□□ 2.66
PNKP-209ENST00000596726 FBXO41Q8TF61 875 aa31.62■■■□□ 2.65
PNKP-209ENST00000596726 EID1Q9Y6B2 187 aa31.62■■■□□ 2.65
PNKP-209ENST00000596726 SETD5Q9C0A6 1442 aa31.57■■■□□ 2.64
PNKP-209ENST00000596726 SLC4A1APQ9BWU0 796 aaKnown RBP31.55■■■□□ 2.64
PNKP-209ENST00000596726 ZFYVE9O95405 1425 aa31.55■■■□□ 2.64
PNKP-209ENST00000596726 IQSEC2Q5JU85 1478 aa31.54■■■□□ 2.64
PNKP-209ENST00000596726 TRPM2O94759 1503 aa31.53■■■□□ 2.64
PNKP-209ENST00000596726 CHGAP10645 457 aaKnown RBP31.51■■■□□ 2.63
PNKP-209ENST00000596726 ACIN1Q9UKV3 1341 aaKnown RBP31.5■■■□□ 2.63
PNKP-209ENST00000596726 RIMS2Q9UQ26 1411 aa31.5■■■□□ 2.63
PNKP-209ENST00000596726 CLTCL1P53675 1640 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms