RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 PANK3Q9H999 370 aa18.55■□□□□ 0.56
CIRBP-242ENST00000593093 GZF1Q9H116 711 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-242ENST00000593093 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
CIRBP-242ENST00000593093 NBPF1Q3BBV0 1214 aa18.54■□□□□ 0.56
CIRBP-242ENST00000593093 PRG4Q92954 1404 aaPredicted RBP18.54■□□□□ 0.56
CIRBP-242ENST00000593093 PLB1Q6P1J6 1458 aa18.54■□□□□ 0.56
CIRBP-242ENST00000593093 GRIN2AQ12879 1464 aa18.53■□□□□ 0.56
CIRBP-242ENST00000593093 SPATA31E1Q6ZUB1 1445 aa18.53■□□□□ 0.56
CIRBP-242ENST00000593093 PDE3BQ13370 1112 aa18.53■□□□□ 0.56
CIRBP-242ENST00000593093 FAM161AQ3B820 660 aa18.53■□□□□ 0.56
CIRBP-242ENST00000593093 NEUROD2Q15784 382 aa18.52■□□□□ 0.56
CIRBP-242ENST00000593093 ADAMTS8Q9UP79 889 aa18.52■□□□□ 0.56
CIRBP-242ENST00000593093 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.56
CIRBP-242ENST00000593093 TSPY4P0CV99 314 aa18.52■□□□□ 0.56
CIRBP-242ENST00000593093 TSPY10P0CW01 314 aa18.52■□□□□ 0.56
CIRBP-242ENST00000593093 SAMD9Q5K651 1589 aa18.52■□□□□ 0.55
CIRBP-242ENST00000593093 WASHC2CQ9Y4E1 1318 aa18.52■□□□□ 0.55
CIRBP-242ENST00000593093 BRD4O60885 1362 aaPredicted RBP18.51■□□□□ 0.55
CIRBP-242ENST00000593093 SUPT6HQ7KZ85 1726 aaKnown RBP18.5■□□□□ 0.55
CIRBP-242ENST00000593093 EIF4G3O43432 1585 aaKnown RBP18.5■□□□□ 0.55
CIRBP-242ENST00000593093 KIAA0586Q9BVV6 1533 aa18.5■□□□□ 0.55
CIRBP-242ENST00000593093 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-242ENST00000593093 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-242ENST00000593093 POGKQ9P215 609 aa18.48■□□□□ 0.55
CIRBP-242ENST00000593093 EHBP1L1Q8N3D4 1523 aa18.48■□□□□ 0.55
CIRBP-242ENST00000593093 WDR62O43379 1518 aa18.47■□□□□ 0.55
CIRBP-242ENST00000593093 DAPK1P53355 1430 aa18.47■□□□□ 0.55
CIRBP-242ENST00000593093 CENPQQ7L2Z9 268 aaPredicted RBP18.46■□□□□ 0.55
CIRBP-242ENST00000593093 NAP1L5Q96NT1 182 aaPredicted RBP18.46■□□□□ 0.55
CIRBP-242ENST00000593093 LRRIQ1Q96JM4 1722 aa18.46■□□□□ 0.55
CIRBP-242ENST00000593093 HNRNPMP52272 730 aaKnown RBP eCLIP18.46■□□□□ 0.55
CIRBP-242ENST00000593093 ABCC5O15440 1437 aa18.46■□□□□ 0.55
CIRBP-242ENST00000593093 TEX14Q8IWB6 1497 aa18.46■□□□□ 0.55
CIRBP-242ENST00000593093 KNSTRNQ9Y448 316 aa18.45■□□□□ 0.54
CIRBP-242ENST00000593093 CARMIL2Q6F5E8 1435 aa18.45■□□□□ 0.54
CIRBP-242ENST00000593093 MIA2Q96PC5 1412 aa18.45■□□□□ 0.54
CIRBP-242ENST00000593093 HECW1Q76N89 1606 aa18.44■□□□□ 0.54
CIRBP-242ENST00000593093 DISP1Q96F81 1524 aa18.43■□□□□ 0.54
CIRBP-242ENST00000593093 UGGT2Q9NYU1 1516 aa18.43■□□□□ 0.54
CIRBP-242ENST00000593093 BCAR3O75815 825 aa18.43■□□□□ 0.54
CIRBP-242ENST00000593093 GOLGA2Q08379 1002 aa18.42■□□□□ 0.54
CIRBP-242ENST00000593093 TNNT2P45379 298 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-242ENST00000593093 NUP153P49790 1475 aaKnown RBP18.41■□□□□ 0.54
CIRBP-242ENST00000593093 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
CIRBP-242ENST00000593093 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
CIRBP-242ENST00000593093 C8orf34Q49A92 452 aa18.4■□□□□ 0.54
CIRBP-242ENST00000593093 COG6Q9Y2V7 657 aa18.39■□□□□ 0.53
CIRBP-242ENST00000593093 LRPPRCP42704 1394 aaKnown RBP18.39■□□□□ 0.53
CIRBP-242ENST00000593093 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.53
CIRBP-242ENST00000593093 APAF1O14727 1248 aa18.39■□□□□ 0.53
CIRBP-242ENST00000593093 BECN1Q14457 450 aa18.39■□□□□ 0.53
CIRBP-242ENST00000593093 CLUAP1Q96AJ1 413 aa18.37■□□□□ 0.53
CIRBP-242ENST00000593093 BCL2L13Q9BXK5 485 aa18.37■□□□□ 0.53
CIRBP-242ENST00000593093 TMF1P82094 1093 aa18.37■□□□□ 0.53
CIRBP-242ENST00000593093 UPF2Q9HAU5 1272 aaKnown RBP18.37■□□□□ 0.53
CIRBP-242ENST00000593093 ANKRD30AQ9BXX3 1397 aa18.37■□□□□ 0.53
CIRBP-242ENST00000593093 PANK1Q8TE04 598 aa18.36■□□□□ 0.53
CIRBP-242ENST00000593093 KIAA0556O60303 1618 aa18.36■□□□□ 0.53
CIRBP-242ENST00000593093 PTPRGP23470 1445 aa18.35■□□□□ 0.53
CIRBP-242ENST00000593093 SEC24BO95487 1268 aa18.35■□□□□ 0.53
CIRBP-242ENST00000593093 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-242ENST00000593093 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
CIRBP-242ENST00000593093 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.53
CIRBP-242ENST00000593093 ANKRD50Q9ULJ7 1429 aa18.33■□□□□ 0.52
CIRBP-242ENST00000593093 BCORL1Q5H9F3 1711 aa18.32■□□□□ 0.52
CIRBP-242ENST00000593093 IGHDP01880 384 aa18.31■□□□□ 0.52
CIRBP-242ENST00000593093 DUSP27Q5VZP5 1158 aa18.31■□□□□ 0.52
CIRBP-242ENST00000593093 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-242ENST00000593093 TCOF1Q13428 1488 aaKnown RBP18.3■□□□□ 0.52
CIRBP-242ENST00000593093 ROCK1Q13464 1354 aa18.3■□□□□ 0.52
CIRBP-242ENST00000593093 PER1O15534 1290 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-242ENST00000593093 FAM43AQ8N2R8 423 aa18.29■□□□□ 0.52
CIRBP-242ENST00000593093 TROQ12816 1431 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-242ENST00000593093 PZPP20742 1482 aa18.29■□□□□ 0.52
CIRBP-242ENST00000593093 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-242ENST00000593093 RAPGEF6Q8TEU7 1601 aa18.28■□□□□ 0.52
CIRBP-242ENST00000593093 PPP2R1AP30153 589 aa18.28■□□□□ 0.52
CIRBP-242ENST00000593093 PNNQ9H307 717 aaKnown RBP18.28■□□□□ 0.52
CIRBP-242ENST00000593093 RRAGDQ9NQL2 400 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-242ENST00000593093 HSP90AA2PQ14568 343 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-242ENST00000593093 KDM2BQ8NHM5 1336 aa18.27■□□□□ 0.52
CIRBP-242ENST00000593093 ARHGEF11O15085 1522 aa18.27■□□□□ 0.52
CIRBP-242ENST00000593093 DISP3Q9P2K9 1392 aa18.26■□□□□ 0.51
CIRBP-242ENST00000593093 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
CIRBP-242ENST00000593093 GOLGA6L3A6NEY3 463 aa18.25■□□□□ 0.51
CIRBP-242ENST00000593093 MFAP1P55081 439 aaKnown RBP18.25■□□□□ 0.51
CIRBP-242ENST00000593093 PANK2Q9BZ23 570 aa18.24■□□□□ 0.51
CIRBP-242ENST00000593093 L1TD1Q5T7N2 865 aaKnown RBP18.24■□□□□ 0.51
CIRBP-242ENST00000593093 PARD3Q8TEW0 1356 aa18.24■□□□□ 0.51
CIRBP-242ENST00000593093 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
CIRBP-242ENST00000593093 CAMSAP2Q08AD1 1489 aa18.21■□□□□ 0.51
CIRBP-242ENST00000593093 KIF14Q15058 1648 aa18.21■□□□□ 0.51
CIRBP-242ENST00000593093 GPATCH8Q9UKJ3 1502 aaKnown RBP18.2■□□□□ 0.5
CIRBP-242ENST00000593093 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
CIRBP-242ENST00000593093 CCDC144AA2RUR9 1427 aa18.2■□□□□ 0.5
CIRBP-242ENST00000593093 HSP90AA1P07900 732 aaKnown RBP18.2■□□□□ 0.5
CIRBP-242ENST00000593093 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
CIRBP-242ENST00000593093 ATP10BO94823 1461 aa18.2■□□□□ 0.5
CIRBP-242ENST00000593093 SLFN5Q08AF3 891 aa18.2■□□□□ 0.5
CIRBP-242ENST00000593093 CENPJQ9HC77 1338 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms