RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 CAMSAP1Q5T5Y3 1602 aa25.19■■□□□ 1.62
CIRBP-240ENST00000592815 PKD2Q13563 968 aa25.14■■□□□ 1.62
CIRBP-240ENST00000592815 KDM5DQ9BY66 1539 aa25.12■■□□□ 1.61
CIRBP-240ENST00000592815 MYO3AQ8NEV4 1616 aa25.12■■□□□ 1.61
CIRBP-240ENST00000592815 TNRQ92752 1358 aa25.12■■□□□ 1.61
CIRBP-240ENST00000592815 CEP170BQ9Y4F5 1589 aaPredicted RBP25.12■■□□□ 1.61
CIRBP-240ENST00000592815 MAST1Q9Y2H9 1570 aa25.11■■□□□ 1.61
CIRBP-240ENST00000592815 A2ML1A8K2U0 1454 aa25.09■■□□□ 1.61
CIRBP-240ENST00000592815 PZPP20742 1482 aa25.09■■□□□ 1.61
CIRBP-240ENST00000592815 FAM135AQ9P2D6 1515 aa25.08■■□□□ 1.61
CIRBP-240ENST00000592815 RRP7BPQ9NSQ0 103 aa25.08■■□□□ 1.61
CIRBP-240ENST00000592815 PLA2R1Q13018 1463 aa25.08■■□□□ 1.6
CIRBP-240ENST00000592815 ZNF142P52746 1687 aaPredicted RBP25.07■■□□□ 1.6
CIRBP-240ENST00000592815 ABCC5O15440 1437 aa25.06■■□□□ 1.6
CIRBP-240ENST00000592815 TCOF1Q13428 1488 aaKnown RBP25.04■■□□□ 1.6
CIRBP-240ENST00000592815 LTBP4Q8N2S1 1624 aa25.03■■□□□ 1.6
CIRBP-240ENST00000592815 ZNF335Q9H4Z2 1342 aaPredicted RBP25.03■■□□□ 1.6
CIRBP-240ENST00000592815 KIF15Q9NS87 1388 aa25.03■■□□□ 1.6
CIRBP-240ENST00000592815 FGD6Q6ZV73 1430 aa25.03■■□□□ 1.6
CIRBP-240ENST00000592815 PTPN23Q9H3S7 1636 aa25.02■■□□□ 1.6
CIRBP-240ENST00000592815 DNMT1P26358 1616 aaKnown RBP25.01■■□□□ 1.59
CIRBP-240ENST00000592815 THEMISQ8N1K5 641 aaPredicted RBP25.01■■□□□ 1.59
CIRBP-240ENST00000592815 CHIC2Q9UKJ5 165 aa25.01■■□□□ 1.59
CIRBP-240ENST00000592815 DUOX2Q9NRD8 1548 aa25.01■■□□□ 1.59
CIRBP-240ENST00000592815 ABCC3O15438 1527 aa25■■□□□ 1.59
CIRBP-240ENST00000592815 RNF17Q9BXT8 1623 aaKnown RBP25■■□□□ 1.59
CIRBP-240ENST00000592815 DAPK1P53355 1430 aa24.99■■□□□ 1.59
CIRBP-240ENST00000592815 SHANK2Q9UPX8 1470 aa24.98■■□□□ 1.59
CIRBP-240ENST00000592815 ANKLE2Q86XL3 938 aa24.98■■□□□ 1.59
CIRBP-240ENST00000592815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.98■■□□□ 1.59
CIRBP-240ENST00000592815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.97■■□□□ 1.595e-6■■■□□ 18.7
CIRBP-240ENST00000592815 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
CIRBP-240ENST00000592815 NLRP1Q9C000 1473 aa24.96■■□□□ 1.59
CIRBP-240ENST00000592815 FAM50AQ14320 339 aaKnown RBP24.94■■□□□ 1.58
CIRBP-240ENST00000592815 ANKRD30AQ9BXX3 1397 aa24.93■■□□□ 1.58
CIRBP-240ENST00000592815 ERBINQ96RT1 1412 aa24.93■■□□□ 1.58
CIRBP-240ENST00000592815 MROH1Q8NDA8 1641 aa24.93■■□□□ 1.58
CIRBP-240ENST00000592815 UGGT1Q9NYU2 1555 aa24.91■■□□□ 1.58
CIRBP-240ENST00000592815 IQSEC2Q5JU85 1478 aa24.9■■□□□ 1.58
CIRBP-240ENST00000592815 ZC3H13Q5T200 1668 aaKnown RBP24.9■■□□□ 1.58
CIRBP-240ENST00000592815 ERVK-7P63135 1459 aa24.89■■□□□ 1.58
CIRBP-240ENST00000592815 CROCC2H7BZ55 1655 aa24.89■■□□□ 1.58
CIRBP-240ENST00000592815 SPATA31D1Q6ZQQ2 1576 aa24.88■■□□□ 1.57
CIRBP-240ENST00000592815 KANK1Q14678 1352 aa24.87■■□□□ 1.57
CIRBP-240ENST00000592815 UBAP1LF5GYI3 381 aa24.86■■□□□ 1.57
CIRBP-240ENST00000592815 CEP152O94986 1710 aa24.85■■□□□ 1.57
CIRBP-240ENST00000592815 NEURL4Q96JN8 1562 aa24.84■■□□□ 1.57
CIRBP-240ENST00000592815 ARHGAP31Q2M1Z3 1444 aa24.84■■□□□ 1.57
CIRBP-240ENST00000592815 PRDM15P57071 1507 aaPredicted RBP24.83■■□□□ 1.57
CIRBP-240ENST00000592815 NPHP4O75161 1426 aaPredicted RBP24.83■■□□□ 1.57
CIRBP-240ENST00000592815 CFAP65Q6ZU64 1925 aaKnown RBP24.82■■□□□ 1.56
CIRBP-240ENST00000592815 POLR1AO95602 1720 aaPredicted RBP24.81■■□□□ 1.56
CIRBP-240ENST00000592815 MED14O60244 1454 aa24.79■■□□□ 1.56
CIRBP-240ENST00000592815 ADGRL2O95490 1459 aa24.77■■□□□ 1.56
CIRBP-240ENST00000592815 PPARGC1BQ86YN6 1023 aaKnown RBP24.77■■□□□ 1.56
CIRBP-240ENST00000592815 TXNDC2Q86VQ3 553 aa24.76■■□□□ 1.55
CIRBP-240ENST00000592815 DEPDC5O75140 1603 aa24.75■■□□□ 1.55
CIRBP-240ENST00000592815 LTKP29376 864 aa24.75■■□□□ 1.55
CIRBP-240ENST00000592815 STAG3Q9UJ98 1225 aa24.75■■□□□ 1.55
CIRBP-240ENST00000592815 CPS1P31327 1500 aa24.73■■□□□ 1.55
CIRBP-240ENST00000592815 ANKRD50Q9ULJ7 1429 aa24.73■■□□□ 1.55
CIRBP-240ENST00000592815 IDI1Q13907 227 aa24.73■■□□□ 1.55
CIRBP-240ENST00000592815 EID1Q9Y6B2 187 aa24.72■■□□□ 1.55
CIRBP-240ENST00000592815 LMTK2Q8IWU2 1503 aa24.71■■□□□ 1.55
CIRBP-240ENST00000592815 VWDEQ8N2E2 1590 aa24.71■■□□□ 1.55
CIRBP-240ENST00000592815 UBR1Q8IWV7 1749 aa24.69■■□□□ 1.54
CIRBP-240ENST00000592815 TOM1O60784 492 aa24.69■■□□□ 1.54
CIRBP-240ENST00000592815 SCAF11Q99590 1463 aaKnown RBP24.69■■□□□ 1.54
CIRBP-240ENST00000592815 DISP3Q9P2K9 1392 aa24.68■■□□□ 1.54
CIRBP-240ENST00000592815 SCAF1Q9H7N4 1312 aaKnown RBP24.68■■□□□ 1.54
CIRBP-240ENST00000592815 ITGAEP38570 1179 aa24.68■■□□□ 1.54
CIRBP-240ENST00000592815 PIP4K2BP78356 416 aa24.68■■□□□ 1.54
CIRBP-240ENST00000592815 IQGAP1P46940 1657 aa24.68■■□□□ 1.54
CIRBP-240ENST00000592815 ARHGAP23Q9P227 1491 aa24.66■■□□□ 1.54
CIRBP-240ENST00000592815 TMEM2Q9UHN6 1383 aa24.66■■□□□ 1.54
CIRBP-240ENST00000592815 SLIT1O75093 1534 aa24.66■■□□□ 1.54
CIRBP-240ENST00000592815 NOS1P29475 1434 aa24.64■■□□□ 1.54
CIRBP-240ENST00000592815 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.54
CIRBP-240ENST00000592815 PIK3C2BO00750 1634 aa24.63■■□□□ 1.53
CIRBP-240ENST00000592815 EFCAB6Q5THR3 1501 aa24.62■■□□□ 1.53
CIRBP-240ENST00000592815 ROCK1Q13464 1354 aa24.61■■□□□ 1.53
CIRBP-240ENST00000592815 SYNMO15061 1565 aa24.59■■□□□ 1.53
CIRBP-240ENST00000592815 HSPA1LP34931 641 aa24.58■■□□□ 1.53
CIRBP-240ENST00000592815 LRRC7Q96NW7 1537 aa24.57■■□□□ 1.52
CIRBP-240ENST00000592815 RPRD2Q5VT52 1461 aaKnown RBP24.56■■□□□ 1.52
CIRBP-240ENST00000592815 STRCP1A6NGW2 1772 aa24.54■■□□□ 1.52
CIRBP-240ENST00000592815 ILDR2Q71H61 639 aa24.54■■□□□ 1.52
CIRBP-240ENST00000592815 BCANQ96GW7 911 aa24.54■■□□□ 1.52
CIRBP-240ENST00000592815 SLC26A8Q96RN1 970 aa24.54■■□□□ 1.52
CIRBP-240ENST00000592815 NUP155O75694 1391 aa24.52■■□□□ 1.52
CIRBP-240ENST00000592815 SENP3Q9H4L4 574 aaPredicted RBP24.51■■□□□ 1.51
CIRBP-240ENST00000592815 KDM5AP29375 1690 aaKnown RBP24.5■■□□□ 1.51
CIRBP-240ENST00000592815 CHGAP10645 457 aaKnown RBP24.5■■□□□ 1.51
CIRBP-240ENST00000592815 ADGRB3O60242 1522 aa24.5■■□□□ 1.51
CIRBP-240ENST00000592815 TET3O43151 1660 aa24.5■■□□□ 1.51
CIRBP-240ENST00000592815 KCNA6P17658 529 aa24.49■■□□□ 1.51
CIRBP-240ENST00000592815 HDGFP51858 240 aaKnown RBP24.49■■□□□ 1.51
CIRBP-240ENST00000592815 UNC13BO14795 1591 aa24.49■■□□□ 1.51
CIRBP-240ENST00000592815 PPP1R15AO75807 674 aaPredicted RBP24.46■■□□□ 1.51
CIRBP-240ENST00000592815 ALKQ9UM73 1620 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms