RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 TNRQ92752 1358 aa31.61■■■□□ 2.65
PRKCSH-216ENST00000592445 FBXO31Q5XUX0 539 aaPredicted RBP31.61■■■□□ 2.65
PRKCSH-216ENST00000592445 PIP4K2BP78356 416 aa31.59■■■□□ 2.65
PRKCSH-216ENST00000592445 CEP162Q5TB80 1403 aa31.58■■■□□ 2.65
PRKCSH-216ENST00000592445 WASHC2CQ9Y4E1 1318 aa31.56■■■□□ 2.64
PRKCSH-216ENST00000592445 TOM1O60784 492 aa31.56■■■□□ 2.64
PRKCSH-216ENST00000592445 HSPA1LP34931 641 aa31.55■■■□□ 2.64
PRKCSH-216ENST00000592445 CPS1P31327 1500 aa31.54■■■□□ 2.64
PRKCSH-216ENST00000592445 PZPP20742 1482 aa31.54■■■□□ 2.64
PRKCSH-216ENST00000592445 POLR1AO95602 1720 aaPredicted RBP31.54■■■□□ 2.64
PRKCSH-216ENST00000592445 KDM5DQ9BY66 1539 aa31.54■■■□□ 2.64
PRKCSH-216ENST00000592445 CCDC141Q6ZP82 1450 aa31.53■■■□□ 2.64
PRKCSH-216ENST00000592445 ANKLE2Q86XL3 938 aa31.53■■■□□ 2.64
PRKCSH-216ENST00000592445 SHANK2Q9UPX8 1470 aa31.52■■■□□ 2.64
PRKCSH-216ENST00000592445 NEURL4Q96JN8 1562 aa31.51■■■□□ 2.64
PRKCSH-216ENST00000592445 RSPH4AQ5TD94 716 aa31.5■■■□□ 2.63
PRKCSH-216ENST00000592445 THEMISQ8N1K5 641 aaPredicted RBP31.5■■■□□ 2.63
PRKCSH-216ENST00000592445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.5■■■□□ 2.63
PRKCSH-216ENST00000592445 FAM135AQ9P2D6 1515 aa31.49■■■□□ 2.63
PRKCSH-216ENST00000592445 CAMSAP2Q08AD1 1489 aa31.47■■■□□ 2.63
PRKCSH-216ENST00000592445 MIA2Q96PC5 1412 aa31.46■■■□□ 2.63
PRKCSH-216ENST00000592445 NCOA2Q15596 1464 aa31.45■■■□□ 2.62
PRKCSH-216ENST00000592445 NLRP1Q9C000 1473 aa31.44■■■□□ 2.62
PRKCSH-216ENST00000592445 MED1Q15648 1581 aaPredicted RBP31.43■■■□□ 2.62
PRKCSH-216ENST00000592445 TSPY4P0CV99 314 aa31.42■■■□□ 2.62
PRKCSH-216ENST00000592445 TSPY10P0CW01 314 aa31.42■■■□□ 2.62
PRKCSH-216ENST00000592445 UGGT1Q9NYU2 1555 aa31.42■■■□□ 2.62
PRKCSH-216ENST00000592445 NPHP4O75161 1426 aaPredicted RBP31.41■■■□□ 2.62
PRKCSH-216ENST00000592445 VWDEQ8N2E2 1590 aa31.39■■■□□ 2.62
PRKCSH-216ENST00000592445 MED14O60244 1454 aa31.36■■■□□ 2.61
PRKCSH-216ENST00000592445 DEPDC5O75140 1603 aa31.35■■■□□ 2.61
PRKCSH-216ENST00000592445 ARHGEF5Q12774 1597 aa31.34■■■□□ 2.61
PRKCSH-216ENST00000592445 PHF23Q9BUL5 403 aaPredicted RBP31.32■■■□□ 2.6
PRKCSH-216ENST00000592445 IQGAP1P46940 1657 aa31.29■■■□□ 2.6
PRKCSH-216ENST00000592445 SENP3Q9H4L4 574 aaPredicted RBP31.27■■■□□ 2.6
PRKCSH-216ENST00000592445 ABCC3O15438 1527 aa31.26■■■□□ 2.59
PRKCSH-216ENST00000592445 RNF17Q9BXT8 1623 aaKnown RBP31.25■■■□□ 2.59
PRKCSH-216ENST00000592445 ALKQ9UM73 1620 aa31.24■■■□□ 2.59
PRKCSH-216ENST00000592445 ZC3H13Q5T200 1668 aaKnown RBP31.22■■■□□ 2.59
PRKCSH-216ENST00000592445 ERVK-7P63135 1459 aa31.21■■■□□ 2.59
PRKCSH-216ENST00000592445 LRRC7Q96NW7 1537 aa31.21■■■□□ 2.59
PRKCSH-216ENST00000592445 MAST1Q9Y2H9 1570 aa31.18■■■□□ 2.58
PRKCSH-216ENST00000592445 STRCP1A6NGW2 1772 aa31.17■■■□□ 2.58
PRKCSH-216ENST00000592445 EIF2AK4Q9P2K8 1649 aaKnown RBP31.16■■■□□ 2.58
PRKCSH-216ENST00000592445 LRRC9Q6ZRR7 1453 aa31.16■■■□□ 2.58
PRKCSH-216ENST00000592445 SYNMO15061 1565 aa31.15■■■□□ 2.58
PRKCSH-216ENST00000592445 SCAF11Q99590 1463 aaKnown RBP31.12■■■□□ 2.57
PRKCSH-216ENST00000592445 MROH1Q8NDA8 1641 aa31.11■■■□□ 2.57
PRKCSH-216ENST00000592445 UBR1Q8IWV7 1749 aa31.1■■■□□ 2.57
PRKCSH-216ENST00000592445 TXNDC2Q86VQ3 553 aa31.1■■■□□ 2.57
PRKCSH-216ENST00000592445 CEP152O94986 1710 aa31.1■■■□□ 2.57
PRKCSH-216ENST00000592445 CFAP65Q6ZU64 1925 aaKnown RBP31.08■■■□□ 2.57
PRKCSH-216ENST00000592445 VPS8Q8N3P4 1428 aa31.07■■■□□ 2.57
PRKCSH-216ENST00000592445 LTKP29376 864 aa31.07■■■□□ 2.56
PRKCSH-216ENST00000592445 DUOX2Q9NRD8 1548 aa31.06■■■□□ 2.56
PRKCSH-216ENST00000592445 MYOM3Q5VTT5 1437 aa31.06■■■□□ 2.56
PRKCSH-216ENST00000592445 KANK4Q5T7N3 995 aaPredicted RBP31.05■■■□□ 2.56
PRKCSH-216ENST00000592445 EID1Q9Y6B2 187 aa31.05■■■□□ 2.56
PRKCSH-216ENST00000592445 ARHGAP23Q9P227 1491 aa31.02■■■□□ 2.56
PRKCSH-216ENST00000592445 SLIT1O75093 1534 aa31.02■■■□□ 2.56
PRKCSH-216ENST00000592445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31■■■□□ 2.554e-7■■□□□ 12.8
PRKCSH-216ENST00000592445 KIF15Q9NS87 1388 aa31■■■□□ 2.55
PRKCSH-216ENST00000592445 ARHGAP31Q2M1Z3 1444 aa30.99■■■□□ 2.55
PRKCSH-216ENST00000592445 RRP7BPQ9NSQ0 103 aa30.98■■■□□ 2.55
PRKCSH-216ENST00000592445 STAG3Q9UJ98 1225 aa30.98■■■□□ 2.55
PRKCSH-216ENST00000592445 PRDM15P57071 1507 aaPredicted RBP30.96■■■□□ 2.55
PRKCSH-216ENST00000592445 MAP3K1Q13233 1512 aa30.95■■■□□ 2.55
PRKCSH-216ENST00000592445 ERBINQ96RT1 1412 aa30.94■■■□□ 2.54
PRKCSH-216ENST00000592445 TMEM2Q9UHN6 1383 aa30.92■■■□□ 2.54
PRKCSH-216ENST00000592445 RGS17Q9UGC6 210 aaPredicted RBP30.92■■■□□ 2.54
PRKCSH-216ENST00000592445 KANK1Q14678 1352 aa30.92■■■□□ 2.54
PRKCSH-216ENST00000592445 PIK3C2BO00750 1634 aa30.91■■■□□ 2.54
PRKCSH-216ENST00000592445 XIRP1Q702N8 1843 aaKnown RBP30.9■■■□□ 2.54
PRKCSH-216ENST00000592445 LOC105371045A0A1W2PR82 267 aa30.9■■■□□ 2.54
PRKCSH-216ENST00000592445 ABCC5O15440 1437 aa30.9■■■□□ 2.54
PRKCSH-216ENST00000592445 FAM135BQ49AJ0 1406 aa30.88■■■□□ 2.53
PRKCSH-216ENST00000592445 TMEM94Q12767 1356 aa30.86■■■□□ 2.53
PRKCSH-216ENST00000592445 CROCC2H7BZ55 1655 aa30.85■■■□□ 2.53
PRKCSH-216ENST00000592445 EFCAB6Q5THR3 1501 aa30.84■■■□□ 2.53
PRKCSH-216ENST00000592445 KCNA6P17658 529 aa30.84■■■□□ 2.53
PRKCSH-216ENST00000592445 IDI1Q13907 227 aa30.84■■■□□ 2.53
PRKCSH-216ENST00000592445 PROSER2Q86WR7 435 aaPredicted RBP30.82■■■□□ 2.52
PRKCSH-216ENST00000592445 SLC26A8Q96RN1 970 aa30.82■■■□□ 2.52
PRKCSH-216ENST00000592445 PTPN23Q9H3S7 1636 aa30.82■■■□□ 2.52
PRKCSH-216ENST00000592445 DAPK1P53355 1430 aa30.81■■■□□ 2.52
PRKCSH-216ENST00000592445 APLP2Q06481 763 aa30.79■■■□□ 2.52
PRKCSH-216ENST00000592445 RBM33Q96EV2 1170 aaKnown RBP30.79■■■□□ 2.52
PRKCSH-216ENST00000592445 CHIC2Q9UKJ5 165 aa30.78■■■□□ 2.52
PRKCSH-216ENST00000592445 KDM5AP29375 1690 aaKnown RBP30.78■■■□□ 2.52
PRKCSH-216ENST00000592445 BCANQ96GW7 911 aa30.77■■■□□ 2.52
PRKCSH-216ENST00000592445 ANKRD30AQ9BXX3 1397 aa30.77■■■□□ 2.52
PRKCSH-216ENST00000592445 LMTK2Q8IWU2 1503 aa30.75■■■□□ 2.51
PRKCSH-216ENST00000592445 ROBO1Q9Y6N7 1651 aa30.74■■■□□ 2.51
PRKCSH-216ENST00000592445 POTEAQ6S8J7 498 aa30.74■■■□□ 2.51
PRKCSH-216ENST00000592445 TET3O43151 1660 aa30.74■■■□□ 2.51
PRKCSH-216ENST00000592445 FGD6Q6ZV73 1430 aa30.71■■■□□ 2.51
PRKCSH-216ENST00000592445 ADGRB3O60242 1522 aa30.69■■■□□ 2.5
PRKCSH-216ENST00000592445 SLC52A1Q9NWF4 448 aa30.69■■■□□ 2.5
PRKCSH-216ENST00000592445 NOS1P29475 1434 aa30.69■■■□□ 2.5
PRKCSH-216ENST00000592445 MSH6P52701 1360 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms