RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	FBXO31	Q5XUX0	539 aa	Predicted RBP	29.4	■■■□□ 2.3
CIRBP-238	ENST00000592412	KDM5D	Q9BY66	1539 aa		29.4	■■■□□ 2.3
CIRBP-238	ENST00000592412	KIF3B	O15066	747 aa		29.39	■■■□□ 2.3
CIRBP-238	ENST00000592412	PZP	P20742	1482 aa		29.38	■■■□□ 2.29
CIRBP-238	ENST00000592412	NEURL4	Q96JN8	1562 aa		29.38	■■■□□ 2.29
CIRBP-238	ENST00000592412	FAM135A	Q9P2D6	1515 aa		29.37	■■■□□ 2.29
CIRBP-238	ENST00000592412	TNR	Q92752	1358 aa		29.37	■■■□□ 2.29
CIRBP-238	ENST00000592412	ARHGEF5	Q12774	1597 aa		29.35	■■■□□ 2.29
CIRBP-238	ENST00000592412	UBAP1L	F5GYI3	381 aa		29.35	■■■□□ 2.29
CIRBP-238	ENST00000592412	SOCS7	O14512	581 aa		29.35	■■■□□ 2.29
CIRBP-238	ENST00000592412	POLR1A	O95602	1720 aa	Predicted RBP	29.34	■■■□□ 2.29
CIRBP-238	ENST00000592412	RSPH4A	Q5TD94	716 aa		29.31	■■■□□ 2.28
CIRBP-238	ENST00000592412	WASHC2C	Q9Y4E1	1318 aa		29.29	■■■□□ 2.28
CIRBP-238	ENST00000592412	LRRC9	Q6ZRR7	1453 aa		29.26	■■■□□ 2.27
CIRBP-238	ENST00000592412	MIA2	Q96PC5	1412 aa		29.26	■■■□□ 2.27
CIRBP-238	ENST00000592412	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	29.25	■■■□□ 2.27	5e-6	■■■□□ 18.7
CIRBP-238	ENST00000592412	RNF17	Q9BXT8	1623 aa	Known RBP	29.24	■■■□□ 2.27
CIRBP-238	ENST00000592412	NLRP1	Q9C000	1473 aa		29.23	■■■□□ 2.27
CIRBP-238	ENST00000592412	SHANK2	Q9UPX8	1470 aa		29.23	■■■□□ 2.27
CIRBP-238	ENST00000592412	MAST1	Q9Y2H9	1570 aa		29.22	■■■□□ 2.27
CIRBP-238	ENST00000592412	VPS8	Q8N3P4	1428 aa		29.22	■■■□□ 2.27
CIRBP-238	ENST00000592412	VWDE	Q8N2E2	1590 aa		29.22	■■■□□ 2.27
CIRBP-238	ENST00000592412	CPS1	P31327	1500 aa		29.21	■■■□□ 2.27
CIRBP-238	ENST00000592412	UGGT1	Q9NYU2	1555 aa		29.21	■■■□□ 2.27
CIRBP-238	ENST00000592412	TSPY4	P0CV99	314 aa		29.2	■■■□□ 2.26
CIRBP-238	ENST00000592412	TSPY10	P0CW01	314 aa		29.2	■■■□□ 2.26
CIRBP-238	ENST00000592412	ABCC3	O15438	1527 aa		29.2	■■■□□ 2.26
CIRBP-238	ENST00000592412	MED14	O60244	1454 aa		29.18	■■■□□ 2.26
CIRBP-238	ENST00000592412	DEPDC5	O75140	1603 aa		29.17	■■■□□ 2.26
CIRBP-238	ENST00000592412	MROH1	Q8NDA8	1641 aa		29.17	■■■□□ 2.26
CIRBP-238	ENST00000592412	ANKLE2	Q86XL3	938 aa		29.17	■■■□□ 2.26
CIRBP-238	ENST00000592412	THEMIS	Q8N1K5	641 aa	Predicted RBP	29.16	■■■□□ 2.26
CIRBP-238	ENST00000592412	ZC3H13	Q5T200	1668 aa	Known RBP	29.15	■■■□□ 2.26
CIRBP-238	ENST00000592412	KANK4	Q5T7N3	995 aa	Predicted RBP	29.15	■■■□□ 2.26
CIRBP-238	ENST00000592412	NPHP4	O75161	1426 aa	Predicted RBP	29.14	■■■□□ 2.26
CIRBP-238	ENST00000592412	EIF2AK4	Q9P2K8	1649 aa	Known RBP	29.14	■■■□□ 2.26
CIRBP-238	ENST00000592412	ALK	Q9UM73	1620 aa		29.12	■■■□□ 2.25
CIRBP-238	ENST00000592412	ERVK-7	P63135	1459 aa		29.11	■■■□□ 2.25
CIRBP-238	ENST00000592412	LOC105371045	A0A1W2PR82	267 aa		29.11	■■■□□ 2.25
CIRBP-238	ENST00000592412	MAP3K1	Q13233	1512 aa		29.1	■■■□□ 2.25
CIRBP-238	ENST00000592412	HSPA1L	P34931	641 aa		29.1	■■■□□ 2.25
CIRBP-238	ENST00000592412	MYOM3	Q5VTT5	1437 aa		29.1	■■■□□ 2.25
CIRBP-238	ENST00000592412	IQGAP1	P46940	1657 aa		29.09	■■■□□ 2.25
CIRBP-238	ENST00000592412	PIP4K2B	P78356	416 aa		29.09	■■■□□ 2.25
CIRBP-238	ENST00000592412	STRCP1	A6NGW2	1772 aa		29.07	■■■□□ 2.24
CIRBP-238	ENST00000592412	CEP152	O94986	1710 aa		29.07	■■■□□ 2.24
CIRBP-238	ENST00000592412	SCAF1	Q9H7N4	1312 aa	Known RBP	29.06	■■■□□ 2.24
CIRBP-238	ENST00000592412	TOM1	O60784	492 aa		29.06	■■■□□ 2.24
CIRBP-238	ENST00000592412	MED1	Q15648	1581 aa	Predicted RBP	29.03	■■■□□ 2.24
CIRBP-238	ENST00000592412	DUOX2	Q9NRD8	1548 aa		29.03	■■■□□ 2.24
CIRBP-238	ENST00000592412	UBR1	Q8IWV7	1749 aa		29.02	■■■□□ 2.24
CIRBP-238	ENST00000592412	PRDM15	P57071	1507 aa	Predicted RBP	28.99	■■■□□ 2.23
CIRBP-238	ENST00000592412	LRRC7	Q96NW7	1537 aa		28.99	■■■□□ 2.23
CIRBP-238	ENST00000592412	CFAP65	Q6ZU64	1925 aa	Known RBP	28.96	■■■□□ 2.23
CIRBP-238	ENST00000592412	CROCC2	H7BZ55	1655 aa		28.96	■■■□□ 2.23
CIRBP-238	ENST00000592412	ABCC5	O15440	1437 aa		28.95	■■■□□ 2.23
CIRBP-238	ENST00000592412	KIF15	Q9NS87	1388 aa		28.95	■■■□□ 2.22
CIRBP-238	ENST00000592412	SYNM	O15061	1565 aa		28.95	■■■□□ 2.22
CIRBP-238	ENST00000592412	ARHGAP23	Q9P227	1491 aa		28.94	■■■□□ 2.22
CIRBP-238	ENST00000592412	ARHGAP31	Q2M1Z3	1444 aa		28.94	■■■□□ 2.22
CIRBP-238	ENST00000592412	SCAF11	Q99590	1463 aa	Known RBP	28.92	■■■□□ 2.22
CIRBP-238	ENST00000592412	SLIT1	O75093	1534 aa		28.92	■■■□□ 2.22
CIRBP-238	ENST00000592412	ERBIN	Q96RT1	1412 aa		28.92	■■■□□ 2.22
CIRBP-238	ENST00000592412	LTK	P29376	864 aa		28.91	■■■□□ 2.22
CIRBP-238	ENST00000592412	PTPN23	Q9H3S7	1636 aa		28.91	■■■□□ 2.22
CIRBP-238	ENST00000592412	RRP7BP	Q9NSQ0	103 aa		28.87	■■■□□ 2.21
CIRBP-238	ENST00000592412	DAPK1	P53355	1430 aa		28.86	■■■□□ 2.21
CIRBP-238	ENST00000592412	PIK3C2B	O00750	1634 aa		28.85	■■■□□ 2.21
CIRBP-238	ENST00000592412	TXNDC2	Q86VQ3	553 aa		28.82	■■■□□ 2.2
CIRBP-238	ENST00000592412	XIRP1	Q702N8	1843 aa	Known RBP	28.82	■■■□□ 2.2
CIRBP-238	ENST00000592412	FGD6	Q6ZV73	1430 aa		28.81	■■■□□ 2.2
CIRBP-238	ENST00000592412	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.79	■■■□□ 2.2
CIRBP-238	ENST00000592412	LMTK2	Q8IWU2	1503 aa		28.79	■■■□□ 2.2
CIRBP-238	ENST00000592412	TMEM2	Q9UHN6	1383 aa		28.77	■■■□□ 2.2
CIRBP-238	ENST00000592412	SENP3	Q9H4L4	574 aa	Predicted RBP	28.77	■■■□□ 2.2
CIRBP-238	ENST00000592412	KDM5A	P29375	1690 aa	Known RBP	28.74	■■■□□ 2.19
CIRBP-238	ENST00000592412	EFCAB6	Q5THR3	1501 aa		28.73	■■■□□ 2.19
CIRBP-238	ENST00000592412	KANK1	Q14678	1352 aa		28.73	■■■□□ 2.19
CIRBP-238	ENST00000592412	CHIC2	Q9UKJ5	165 aa		28.72	■■■□□ 2.19
CIRBP-238	ENST00000592412	EID1	Q9Y6B2	187 aa		28.72	■■■□□ 2.19
CIRBP-238	ENST00000592412	IDI1	Q13907	227 aa		28.71	■■■□□ 2.19
CIRBP-238	ENST00000592412	ANKRD30A	Q9BXX3	1397 aa		28.7	■■■□□ 2.18
CIRBP-238	ENST00000592412	NOS1	P29475	1434 aa		28.69	■■■□□ 2.18
CIRBP-238	ENST00000592412	TET3	O43151	1660 aa		28.69	■■■□□ 2.18
CIRBP-238	ENST00000592412	PHF23	Q9BUL5	403 aa	Predicted RBP	28.68	■■■□□ 2.18
CIRBP-238	ENST00000592412	APLP2	Q06481	763 aa		28.67	■■■□□ 2.18
CIRBP-238	ENST00000592412	ADGRL2	O95490	1459 aa		28.66	■■■□□ 2.18
CIRBP-238	ENST00000592412	ADGRB3	O60242	1522 aa		28.64	■■■□□ 2.18
CIRBP-238	ENST00000592412	STAG3	Q9UJ98	1225 aa		28.64	■■■□□ 2.18
CIRBP-238	ENST00000592412	TMEM94	Q12767	1356 aa		28.63	■■■□□ 2.17
CIRBP-238	ENST00000592412	FAM135B	Q49AJ0	1406 aa		28.6	■■■□□ 2.17
CIRBP-238	ENST00000592412	SLC26A8	Q96RN1	970 aa		28.6	■■■□□ 2.17
CIRBP-238	ENST00000592412	RGS17	Q9UGC6	210 aa	Predicted RBP	28.6	■■■□□ 2.17
CIRBP-238	ENST00000592412	KCNA6	P17658	529 aa		28.59	■■■□□ 2.17
CIRBP-238	ENST00000592412	NWD1	Q149M9	1564 aa		28.58	■■■□□ 2.17
CIRBP-238	ENST00000592412	RBM33	Q96EV2	1170 aa	Known RBP	28.56	■■■□□ 2.16
CIRBP-238	ENST00000592412	SLC52A1	Q9NWF4	448 aa		28.54	■■■□□ 2.16
CIRBP-238	ENST00000592412	ROBO1	Q9Y6N7	1651 aa		28.54	■■■□□ 2.16
CIRBP-238	ENST00000592412	NKTR	P30414	1462 aa	Known RBP	28.53	■■■□□ 2.16
CIRBP-238	ENST00000592412	RPRD2	Q5VT52	1461 aa	Known RBP	28.53	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 862.4 ms