RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 MYOM3Q5VTT5 1437 aa28.25■■■□□ 2.11
VAT1-208ENST00000590924 MIA2Q96PC5 1412 aa28.25■■■□□ 2.11
VAT1-208ENST00000590924 LTBP4Q8N2S1 1624 aa28.24■■■□□ 2.11
VAT1-208ENST00000590924 RNF17Q9BXT8 1623 aaKnown RBP28.24■■■□□ 2.11
VAT1-208ENST00000590924 TSPY4P0CV99 314 aa28.23■■■□□ 2.11
VAT1-208ENST00000590924 TSPY10P0CW01 314 aa28.23■■■□□ 2.11
VAT1-208ENST00000590924 EIF2AK4Q9P2K8 1649 aaKnown RBP28.22■■■□□ 2.11
VAT1-208ENST00000590924 DNMT1P26358 1616 aaKnown RBP28.21■■■□□ 2.11
VAT1-208ENST00000590924 PZPP20742 1482 aa28.21■■■□□ 2.11
VAT1-208ENST00000590924 A2ML1A8K2U0 1454 aa28.2■■■□□ 2.1
VAT1-208ENST00000590924 TCOF1Q13428 1488 aaKnown RBP28.2■■■□□ 2.1
VAT1-208ENST00000590924 ZC3H13Q5T200 1668 aaKnown RBP28.19■■■□□ 2.1
VAT1-208ENST00000590924 CROCC2H7BZ55 1655 aa28.19■■■□□ 2.1
VAT1-208ENST00000590924 POLR1AO95602 1720 aaPredicted RBP28.18■■■□□ 2.1
VAT1-208ENST00000590924 IQSEC2Q5JU85 1478 aa28.15■■■□□ 2.1
VAT1-208ENST00000590924 PKD2Q13563 968 aa28.14■■■□□ 2.1
VAT1-208ENST00000590924 NCKAP5LQ9HCH0 1330 aa28.14■■■□□ 2.09
VAT1-208ENST00000590924 TNRQ92752 1358 aa28.13■■■□□ 2.09
VAT1-208ENST00000590924 WASHC2CQ9Y4E1 1318 aa28.13■■■□□ 2.09
VAT1-208ENST00000590924 PTPN23Q9H3S7 1636 aa28.12■■■□□ 2.09
VAT1-208ENST00000590924 MROH1Q8NDA8 1641 aa28.11■■■□□ 2.09
VAT1-208ENST00000590924 CEP152O94986 1710 aa28.09■■■□□ 2.09
VAT1-208ENST00000590924 ABCC3O15438 1527 aa28.09■■■□□ 2.09
VAT1-208ENST00000590924 FBXO31Q5XUX0 539 aaPredicted RBP28.09■■■□□ 2.09
VAT1-208ENST00000590924 SHANK2Q9UPX8 1470 aa28.08■■■□□ 2.09
VAT1-208ENST00000590924 DUOX2Q9NRD8 1548 aa28.08■■■□□ 2.09
VAT1-208ENST00000590924 CFAP65Q6ZU64 1925 aaKnown RBP28.07■■■□□ 2.08
VAT1-208ENST00000590924 NLRP1Q9C000 1473 aa28.07■■■□□ 2.08
VAT1-208ENST00000590924 APLP2Q06481 763 aa28.06■■■□□ 2.08
VAT1-208ENST00000590924 NEURL4Q96JN8 1562 aa28.05■■■□□ 2.08
VAT1-208ENST00000590924 SPATA31D1Q6ZQQ2 1576 aa28.03■■■□□ 2.08
VAT1-208ENST00000590924 ZNF335Q9H4Z2 1342 aaPredicted RBP28.01■■■□□ 2.07
VAT1-208ENST00000590924 UGGT1Q9NYU2 1555 aa28.01■■■□□ 2.07
VAT1-208ENST00000590924 ABCC5O15440 1437 aa28.01■■■□□ 2.07
VAT1-208ENST00000590924 PRDM15P57071 1507 aaPredicted RBP28■■■□□ 2.07
VAT1-208ENST00000590924 FGD6Q6ZV73 1430 aa28■■■□□ 2.07
VAT1-208ENST00000590924 DEPDC5O75140 1603 aa27.98■■■□□ 2.07
VAT1-208ENST00000590924 DAPK1P53355 1430 aa27.98■■■□□ 2.07
VAT1-208ENST00000590924 ERBINQ96RT1 1412 aa27.98■■■□□ 2.07
VAT1-208ENST00000590924 KIF15Q9NS87 1388 aa27.98■■■□□ 2.07
VAT1-208ENST00000590924 ERVK-7P63135 1459 aa27.96■■■□□ 2.07
VAT1-208ENST00000590924 THEMISQ8N1K5 641 aaPredicted RBP27.93■■■□□ 2.06
VAT1-208ENST00000590924 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.93■■■□□ 2.066e-7■□□□□ 8.5
VAT1-208ENST00000590924 UBR1Q8IWV7 1749 aa27.92■■■□□ 2.06
VAT1-208ENST00000590924 MED14O60244 1454 aa27.9■■■□□ 2.06
VAT1-208ENST00000590924 IQGAP1P46940 1657 aa27.9■■■□□ 2.06
VAT1-208ENST00000590924 ARHGAP31Q2M1Z3 1444 aa27.88■■■□□ 2.05
VAT1-208ENST00000590924 ANKLE2Q86XL3 938 aa27.88■■■□□ 2.05
VAT1-208ENST00000590924 CPS1P31327 1500 aa27.87■■■□□ 2.05
VAT1-208ENST00000590924 RRP7BPQ9NSQ0 103 aa27.87■■■□□ 2.05
VAT1-208ENST00000590924 VWDEQ8N2E2 1590 aa27.85■■■□□ 2.05
VAT1-208ENST00000590924 NPHP4O75161 1426 aaPredicted RBP27.84■■■□□ 2.05
VAT1-208ENST00000590924 ANKRD30AQ9BXX3 1397 aa27.84■■■□□ 2.05
VAT1-208ENST00000590924 ADGRL2O95490 1459 aa27.81■■■□□ 2.04
VAT1-208ENST00000590924 LMTK2Q8IWU2 1503 aa27.79■■■□□ 2.04
VAT1-208ENST00000590924 KANK1Q14678 1352 aa27.78■■■□□ 2.04
VAT1-208ENST00000590924 UBAP1LF5GYI3 381 aa27.78■■■□□ 2.04
VAT1-208ENST00000590924 STRCP1A6NGW2 1772 aa27.78■■■□□ 2.04
VAT1-208ENST00000590924 KDM5AP29375 1690 aaKnown RBP27.78■■■□□ 2.04
VAT1-208ENST00000590924 PIK3C2BO00750 1634 aa27.77■■■□□ 2.04
VAT1-208ENST00000590924 CHIC2Q9UKJ5 165 aa27.76■■■□□ 2.03
VAT1-208ENST00000590924 SLIT1O75093 1534 aa27.76■■■□□ 2.03
VAT1-208ENST00000590924 ARHGAP23Q9P227 1491 aa27.75■■■□□ 2.03
VAT1-208ENST00000590924 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.74■■■□□ 2.03
VAT1-208ENST00000590924 SCAF11Q99590 1463 aaKnown RBP27.73■■■□□ 2.03
VAT1-208ENST00000590924 EFCAB6Q5THR3 1501 aa27.72■■■□□ 2.03
VAT1-208ENST00000590924 SYNMO15061 1565 aa27.72■■■□□ 2.03
VAT1-208ENST00000590924 DISP3Q9P2K9 1392 aa27.7■■■□□ 2.02
VAT1-208ENST00000590924 FAM50AQ14320 339 aaKnown RBP27.68■■■□□ 2.02
VAT1-208ENST00000590924 ANKRD50Q9ULJ7 1429 aa27.65■■■□□ 2.02
VAT1-208ENST00000590924 TET3O43151 1660 aa27.64■■■□□ 2.02
VAT1-208ENST00000590924 GCC2Q8IWJ2 1684 aa27.63■■■□□ 2.01
VAT1-208ENST00000590924 NOS1P29475 1434 aa27.63■■■□□ 2.01
VAT1-208ENST00000590924 TOM1O60784 492 aa27.62■■■□□ 2.01
VAT1-208ENST00000590924 ALKQ9UM73 1620 aa27.62■■■□□ 2.01
VAT1-208ENST00000590924 LRRC7Q96NW7 1537 aa27.62■■■□□ 2.01
VAT1-208ENST00000590924 UNC13BO14795 1591 aa27.61■■■□□ 2.01
VAT1-208ENST00000590924 LTKP29376 864 aa27.61■■■□□ 2.01
VAT1-208ENST00000590924 RPRD2Q5VT52 1461 aaKnown RBP27.61■■■□□ 2.01
VAT1-208ENST00000590924 XIRP1Q702N8 1843 aaKnown RBP27.6■■■□□ 2.01
VAT1-208ENST00000590924 MYO5BQ9ULV0 1848 aa27.6■■■□□ 2.01
VAT1-208ENST00000590924 TMEM2Q9UHN6 1383 aa27.6■■■□□ 2.01
VAT1-208ENST00000590924 ADGRB3O60242 1522 aa27.59■■■□□ 2.01
VAT1-208ENST00000590924 TXNDC2Q86VQ3 553 aa27.59■■■□□ 2.01
VAT1-208ENST00000590924 EID1Q9Y6B2 187 aa27.57■■■□□ 2
VAT1-208ENST00000590924 IDI1Q13907 227 aa27.56■■■□□ 2
VAT1-208ENST00000590924 STAG3Q9UJ98 1225 aa27.55■■■□□ 2
VAT1-208ENST00000590924 PIP4K2BP78356 416 aa27.54■■■□□ 2
VAT1-208ENST00000590924 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
VAT1-208ENST00000590924 ROCK1Q13464 1354 aa27.52■■■□□ 2
VAT1-208ENST00000590924 ILDR2Q71H61 639 aa27.52■■■□□ 2
VAT1-208ENST00000590924 E9PCH4 1651 aa27.51■■□□□ 1.99
VAT1-208ENST00000590924 IQGAP3Q86VI3 1631 aa27.51■■□□□ 1.99
VAT1-208ENST00000590924 SLC52A1Q9NWF4 448 aa27.5■■□□□ 1.99
VAT1-208ENST00000590924 HSPA1LP34931 641 aa27.49■■□□□ 1.99
VAT1-208ENST00000590924 TMEM131LA2VDJ0 1609 aa27.46■■□□□ 1.99
VAT1-208ENST00000590924 MED1Q15648 1581 aaPredicted RBP27.43■■□□□ 1.98
VAT1-208ENST00000590924 NWD1Q149M9 1564 aa27.42■■□□□ 1.98
VAT1-208ENST00000590924 ZFYVE9O95405 1425 aa27.41■■□□□ 1.98
VAT1-208ENST00000590924 CHD2O14647 1828 aaKnown RBP27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms