RNA–Protein interactions for RNA: ENST00000590605.2

TCF3-214, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-214ENST00000590605 ABCA6Q8N139 1617 aa23.55■■□□□ 1.36
TCF3-214ENST00000590605 GCC2Q8IWJ2 1684 aa23.53■■□□□ 1.36
TCF3-214ENST00000590605 AGLP35573 1532 aa23.5■■□□□ 1.35
TCF3-214ENST00000590605 ILDR1Q86SU0 546 aaPredicted RBP23.49■■□□□ 1.35
TCF3-214ENST00000590605 FER1L4A9Z1Z3 1794 aa23.49■■□□□ 1.35
TCF3-214ENST00000590605 EIF2AK4Q9P2K8 1649 aaKnown RBP23.48■■□□□ 1.35
TCF3-214ENST00000590605 RAB3GAP2Q9H2M9 1393 aa23.48■■□□□ 1.35
TCF3-214ENST00000590605 KIF3BO15066 747 aa23.46■■□□□ 1.35
TCF3-214ENST00000590605 PPP6R1Q9UPN7 881 aa23.46■■□□□ 1.35
TCF3-214ENST00000590605 MLECQ14165 292 aa23.45■■□□□ 1.34
TCF3-214ENST00000590605 LMTK3Q96Q04 1460 aa23.43■■□□□ 1.34
TCF3-214ENST00000590605 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
TCF3-214ENST00000590605 KANK1Q14678 1352 aa23.39■■□□□ 1.33
TCF3-214ENST00000590605 RNF17Q9BXT8 1623 aaKnown RBP23.37■■□□□ 1.33
TCF3-214ENST00000590605 TRIM52Q96A61 297 aa23.36■■□□□ 1.33
TCF3-214ENST00000590605 FAM135AQ9P2D6 1515 aa23.36■■□□□ 1.33
TCF3-214ENST00000590605 NUP155O75694 1391 aa23.36■■□□□ 1.33
TCF3-214ENST00000590605 UNC13BO14795 1591 aa23.35■■□□□ 1.33
TCF3-214ENST00000590605 DEPDC5O75140 1603 aa23.35■■□□□ 1.33
TCF3-214ENST00000590605 GGT6Q6P531 493 aa23.35■■□□□ 1.33
TCF3-214ENST00000590605 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.33
TCF3-214ENST00000590605 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.33
TCF3-214ENST00000590605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.32■■□□□ 1.32
TCF3-214ENST00000590605 WASHC2CQ9Y4E1 1318 aa23.3■■□□□ 1.32
TCF3-214ENST00000590605 VWDEQ8N2E2 1590 aa23.29■■□□□ 1.32
TCF3-214ENST00000590605 HSPA2P54652 639 aa23.28■■□□□ 1.32
TCF3-214ENST00000590605 ESF1Q9H501 851 aaKnown RBP23.28■■□□□ 1.32
TCF3-214ENST00000590605 MROH1Q8NDA8 1641 aa23.28■■□□□ 1.32
TCF3-214ENST00000590605 LMTK2Q8IWU2 1503 aa23.28■■□□□ 1.32
TCF3-214ENST00000590605 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
TCF3-214ENST00000590605 PREX1Q8TCU6 1659 aa23.27■■□□□ 1.32
TCF3-214ENST00000590605 IQGAP3Q86VI3 1631 aa23.26■■□□□ 1.31
TCF3-214ENST00000590605 CNTLNQ9NXG0 1405 aa23.26■■□□□ 1.31
TCF3-214ENST00000590605 MPHOSPH9Q99550 1183 aa23.26■■□□□ 1.31
TCF3-214ENST00000590605 PZPP20742 1482 aa23.23■■□□□ 1.31
TCF3-214ENST00000590605 ZC3H13Q5T200 1668 aaKnown RBP23.22■■□□□ 1.31
TCF3-214ENST00000590605 CEBPAP49715 358 aaPredicted RBP23.22■■□□□ 1.31
TCF3-214ENST00000590605 ABCC3O15438 1527 aa23.22■■□□□ 1.31
TCF3-214ENST00000590605 ARHGAP31Q2M1Z3 1444 aa23.2■■□□□ 1.3
TCF3-214ENST00000590605 C3P01024 1663 aa23.19■■□□□ 1.3
TCF3-214ENST00000590605 RPRD2Q5VT52 1461 aaKnown RBP23.18■■□□□ 1.3
TCF3-214ENST00000590605 DHX57Q6P158 1386 aaKnown RBP23.18■■□□□ 1.3
TCF3-214ENST00000590605 PKD2Q13563 968 aa23.18■■□□□ 1.3
TCF3-214ENST00000590605 SETD1BQ9UPS6 1966 aaKnown RBP23.18■■□□□ 1.3
TCF3-214ENST00000590605 TET3O43151 1660 aa23.17■■□□□ 1.3
TCF3-214ENST00000590605 FBXO41Q8TF61 875 aa23.17■■□□□ 1.3
TCF3-214ENST00000590605 CLSPNQ9HAW4 1339 aa23.16■■□□□ 1.3
TCF3-214ENST00000590605 UHRF1BP1Q6BDS2 1440 aa23.15■■□□□ 1.3
TCF3-214ENST00000590605 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
TCF3-214ENST00000590605 ZMYM3Q14202 1370 aa23.14■■□□□ 1.29
TCF3-214ENST00000590605 MROH2AA6NES4 1674 aa23.1■■□□□ 1.29
TCF3-214ENST00000590605 NPATQ14207 1427 aa23.1■■□□□ 1.29
TCF3-214ENST00000590605 CAMSAP1Q5T5Y3 1602 aa23.1■■□□□ 1.29
TCF3-214ENST00000590605 CEP152O94986 1710 aa23.1■■□□□ 1.29
TCF3-214ENST00000590605 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
TCF3-214ENST00000590605 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
TCF3-214ENST00000590605 STRCQ7RTU9 1775 aa23.07■■□□□ 1.28
TCF3-214ENST00000590605 PTPRTO14522 1441 aa23.07■■□□□ 1.28
TCF3-214ENST00000590605 ANKRD30BQ9BXX2 1392 aa23.05■■□□□ 1.28
TCF3-214ENST00000590605 E9PCH4 1651 aa23.05■■□□□ 1.28
TCF3-214ENST00000590605 NOS1P29475 1434 aa23.04■■□□□ 1.28
TCF3-214ENST00000590605 FOXD1Q16676 465 aa23.02■■□□□ 1.28
TCF3-214ENST00000590605 SLC52A1Q9NWF4 448 aa23.02■■□□□ 1.28
TCF3-214ENST00000590605 ERVK-7P63135 1459 aa23■■□□□ 1.27
TCF3-214ENST00000590605 SPATA31D1Q6ZQQ2 1576 aa22.99■■□□□ 1.27
TCF3-214ENST00000590605 DMRT2Q9Y5R5 561 aa22.99■■□□□ 1.27
TCF3-214ENST00000590605 PLA2R1Q13018 1463 aa22.98■■□□□ 1.27
TCF3-214ENST00000590605 TRPM2O94759 1503 aa22.98■■□□□ 1.27
TCF3-214ENST00000590605 CERKQ8TCT0 537 aa22.98■■□□□ 1.27
TCF3-214ENST00000590605 FBXO31Q5XUX0 539 aaPredicted RBP22.97■■□□□ 1.27
TCF3-214ENST00000590605 CCDC144AA2RUR9 1427 aa22.97■■□□□ 1.27
TCF3-214ENST00000590605 TNRQ92752 1358 aa22.95■■□□□ 1.26
TCF3-214ENST00000590605 SPHKAPQ2M3C7 1700 aa22.94■■□□□ 1.26
TCF3-214ENST00000590605 MYO3AQ8NEV4 1616 aa22.92■■□□□ 1.26
TCF3-214ENST00000590605 TIMELESSQ9UNS1 1208 aa22.9■■□□□ 1.26
TCF3-214ENST00000590605 NLRP1Q9C000 1473 aa22.9■■□□□ 1.26
TCF3-214ENST00000590605 ZNF142P52746 1687 aaPredicted RBP22.9■■□□□ 1.26
TCF3-214ENST00000590605 SYNMO15061 1565 aa22.89■■□□□ 1.25
TCF3-214ENST00000590605 IDI1Q13907 227 aa22.88■■□□□ 1.25
TCF3-214ENST00000590605 NEURL4Q96JN8 1562 aa22.86■■□□□ 1.25
TCF3-214ENST00000590605 PIK3C2BO00750 1634 aa22.86■■□□□ 1.25
TCF3-214ENST00000590605 CEP170BQ9Y4F5 1589 aaPredicted RBP22.85■■□□□ 1.25
TCF3-214ENST00000590605 SIN3AQ96ST3 1273 aa22.85■■□□□ 1.25
TCF3-214ENST00000590605 CFAP65Q6ZU64 1925 aaKnown RBP22.84■■□□□ 1.25
TCF3-214ENST00000590605 NEUROD1Q13562 356 aa22.83■■□□□ 1.25
TCF3-214ENST00000590605 STAC3Q96MF2 364 aa22.83■■□□□ 1.25
TCF3-214ENST00000590605 CLTCL1P53675 1640 aa22.82■■□□□ 1.24
TCF3-214ENST00000590605 STAG3Q9UJ98 1225 aa22.81■■□□□ 1.24
TCF3-214ENST00000590605 RPGRIP1LQ68CZ1 1315 aa22.81■■□□□ 1.24
TCF3-214ENST00000590605 SPATA31E1Q6ZUB1 1445 aa22.8■■□□□ 1.24
TCF3-214ENST00000590605 A2ML1A8K2U0 1454 aa22.79■■□□□ 1.24
TCF3-214ENST00000590605 UGGT1Q9NYU2 1555 aa22.79■■□□□ 1.24
TCF3-214ENST00000590605 KDM5AP29375 1690 aaKnown RBP22.78■■□□□ 1.24
TCF3-214ENST00000590605 ZEB1P37275 1124 aaPredicted RBP22.78■■□□□ 1.24
TCF3-214ENST00000590605 LTBP4Q8N2S1 1624 aa22.78■■□□□ 1.24
TCF3-214ENST00000590605 TONSLQ96HA7 1378 aa22.77■■□□□ 1.24
TCF3-214ENST00000590605 CHGAP10645 457 aaKnown RBP22.77■■□□□ 1.24
TCF3-214ENST00000590605 THEMISQ8N1K5 641 aaPredicted RBP22.77■■□□□ 1.24
TCF3-214ENST00000590605 NCKAP5LQ9HCH0 1330 aa22.77■■□□□ 1.24
TCF3-214ENST00000590605 ADGRB3O60242 1522 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms