RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 KIF15Q9NS87 1388 aa28.28■■■□□ 2.12
LDLRAD4-215ENST00000590371 CHIC2Q9UKJ5 165 aa28.28■■■□□ 2.12
LDLRAD4-215ENST00000590371 EIF2AK4Q9P2K8 1649 aaKnown RBP28.28■■■□□ 2.12
LDLRAD4-215ENST00000590371 RRP7BPQ9NSQ0 103 aa28.27■■■□□ 2.12
LDLRAD4-215ENST00000590371 KDM5DQ9BY66 1539 aa28.26■■■□□ 2.11
LDLRAD4-215ENST00000590371 WASHC2CQ9Y4E1 1318 aa28.25■■■□□ 2.11
LDLRAD4-215ENST00000590371 FAM135AQ9P2D6 1515 aa28.24■■■□□ 2.11
LDLRAD4-215ENST00000590371 NPATQ14207 1427 aa28.24■■■□□ 2.11
LDLRAD4-215ENST00000590371 ANKRD30AQ9BXX3 1397 aa28.24■■■□□ 2.11
LDLRAD4-215ENST00000590371 RNF17Q9BXT8 1623 aaKnown RBP28.23■■■□□ 2.11
LDLRAD4-215ENST00000590371 ERBINQ96RT1 1412 aa28.19■■■□□ 2.1
LDLRAD4-215ENST00000590371 PTPRKQ15262 1439 aa28.18■■■□□ 2.1
LDLRAD4-215ENST00000590371 ZC3H13Q5T200 1668 aaKnown RBP28.15■■■□□ 2.1
LDLRAD4-215ENST00000590371 NCOA1Q15788 1441 aa28.14■■■□□ 2.1
LDLRAD4-215ENST00000590371 ADGRL2O95490 1459 aa28.14■■■□□ 2.09
LDLRAD4-215ENST00000590371 MYO3AQ8NEV4 1616 aa28.13■■■□□ 2.09
LDLRAD4-215ENST00000590371 MROH1Q8NDA8 1641 aa28.12■■■□□ 2.09
LDLRAD4-215ENST00000590371 PZPP20742 1482 aa28.12■■■□□ 2.09
LDLRAD4-215ENST00000590371 ABCC3O15438 1527 aa28.12■■■□□ 2.09
LDLRAD4-215ENST00000590371 CEP152O94986 1710 aa28.11■■■□□ 2.09
LDLRAD4-215ENST00000590371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.09■■■□□ 2.09
LDLRAD4-215ENST00000590371 ITGAEP38570 1179 aa28.08■■■□□ 2.09
LDLRAD4-215ENST00000590371 FBXO31Q5XUX0 539 aaPredicted RBP28.08■■■□□ 2.09
LDLRAD4-215ENST00000590371 PRDM15P57071 1507 aaPredicted RBP28.07■■■□□ 2.08
LDLRAD4-215ENST00000590371 ZNF142P52746 1687 aaPredicted RBP28.07■■■□□ 2.08
LDLRAD4-215ENST00000590371 KANK1Q14678 1352 aa28.06■■■□□ 2.08
LDLRAD4-215ENST00000590371 TNRQ92752 1358 aa28.06■■■□□ 2.08
LDLRAD4-215ENST00000590371 DEPDC5O75140 1603 aa28.05■■■□□ 2.08
LDLRAD4-215ENST00000590371 CAMSAP1Q5T5Y3 1602 aa28.05■■■□□ 2.08
LDLRAD4-215ENST00000590371 CEP170BQ9Y4F5 1589 aaPredicted RBP28.05■■■□□ 2.08
LDLRAD4-215ENST00000590371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.04■■■□□ 2.08
LDLRAD4-215ENST00000590371 STRCQ7RTU9 1775 aa28.03■■■□□ 2.08
LDLRAD4-215ENST00000590371 ANKRD50Q9ULJ7 1429 aa28.01■■■□□ 2.08
LDLRAD4-215ENST00000590371 DMRT2Q9Y5R5 561 aa28■■■□□ 2.07
LDLRAD4-215ENST00000590371 CFAP65Q6ZU64 1925 aaKnown RBP28■■■□□ 2.07
LDLRAD4-215ENST00000590371 A2ML1A8K2U0 1454 aa27.99■■■□□ 2.07
LDLRAD4-215ENST00000590371 ROCK1Q13464 1354 aa27.98■■■□□ 2.07
LDLRAD4-215ENST00000590371 RRBP1Q9P2E9 1410 aaKnown RBP27.97■■■□□ 2.07
LDLRAD4-215ENST00000590371 ERVK-7P63135 1459 aa27.95■■■□□ 2.06
LDLRAD4-215ENST00000590371 SPATA31D1Q6ZQQ2 1576 aa27.94■■■□□ 2.06
LDLRAD4-215ENST00000590371 NLRP1Q9C000 1473 aa27.93■■■□□ 2.06
LDLRAD4-215ENST00000590371 VWDEQ8N2E2 1590 aa27.91■■■□□ 2.06
LDLRAD4-215ENST00000590371 ARHGAP31Q2M1Z3 1444 aa27.91■■■□□ 2.06
LDLRAD4-215ENST00000590371 PLA2R1Q13018 1463 aa27.9■■■□□ 2.06
LDLRAD4-215ENST00000590371 LMTK2Q8IWU2 1503 aa27.9■■■□□ 2.06
LDLRAD4-215ENST00000590371 NCKAP5LQ9HCH0 1330 aa27.89■■■□□ 2.05
LDLRAD4-215ENST00000590371 PTPRTO14522 1441 aa27.88■■■□□ 2.05
LDLRAD4-215ENST00000590371 UGGT1Q9NYU2 1555 aa27.87■■■□□ 2.05
LDLRAD4-215ENST00000590371 PKD2Q13563 968 aa27.86■■■□□ 2.05
LDLRAD4-215ENST00000590371 UNC13BO14795 1591 aa27.85■■■□□ 2.05
LDLRAD4-215ENST00000590371 EFCAB6Q5THR3 1501 aa27.84■■■□□ 2.05
LDLRAD4-215ENST00000590371 THEMISQ8N1K5 641 aaPredicted RBP27.84■■■□□ 2.05
LDLRAD4-215ENST00000590371 POLR1AO95602 1720 aaPredicted RBP27.8■■■□□ 2.04
LDLRAD4-215ENST00000590371 TET3O43151 1660 aa27.79■■■□□ 2.04
LDLRAD4-215ENST00000590371 GCC2Q8IWJ2 1684 aa27.77■■■□□ 2.04
LDLRAD4-215ENST00000590371 ANKLE2Q86XL3 938 aa27.76■■■□□ 2.03
LDLRAD4-215ENST00000590371 UBR1Q8IWV7 1749 aa27.75■■■□□ 2.03
LDLRAD4-215ENST00000590371 ILDR1Q86SU0 546 aaPredicted RBP27.75■■■□□ 2.03
LDLRAD4-215ENST00000590371 NUP155O75694 1391 aa27.74■■■□□ 2.03
LDLRAD4-215ENST00000590371 IQGAP3Q86VI3 1631 aa27.74■■■□□ 2.03
LDLRAD4-215ENST00000590371 STAG3Q9UJ98 1225 aa27.74■■■□□ 2.03
LDLRAD4-215ENST00000590371 RPRD2Q5VT52 1461 aaKnown RBP27.74■■■□□ 2.03
LDLRAD4-215ENST00000590371 PIK3C2BO00750 1634 aa27.72■■■□□ 2.03
LDLRAD4-215ENST00000590371 CERKQ8TCT0 537 aa27.72■■■□□ 2.03
LDLRAD4-215ENST00000590371 SYNMO15061 1565 aa27.71■■■□□ 2.03
LDLRAD4-215ENST00000590371 NOS1P29475 1434 aa27.7■■■□□ 2.03
LDLRAD4-215ENST00000590371 NEURL4Q96JN8 1562 aa27.69■■■□□ 2.02
LDLRAD4-215ENST00000590371 NAIPQ13075 1403 aa27.69■■■□□ 2.02
LDLRAD4-215ENST00000590371 E9PCH4 1651 aa27.68■■■□□ 2.02
LDLRAD4-215ENST00000590371 IDI1Q13907 227 aa27.67■■■□□ 2.02
LDLRAD4-215ENST00000590371 FBXO41Q8TF61 875 aa27.67■■■□□ 2.02
LDLRAD4-215ENST00000590371 SLC52A1Q9NWF4 448 aa27.65■■■□□ 2.02
LDLRAD4-215ENST00000590371 HFM1A2PYH4 1435 aa27.65■■■□□ 2.02
LDLRAD4-215ENST00000590371 NPHP4O75161 1426 aaPredicted RBP27.64■■■□□ 2.02
LDLRAD4-215ENST00000590371 KDM5AP29375 1690 aaKnown RBP27.63■■■□□ 2.01
LDLRAD4-215ENST00000590371 ZNF335Q9H4Z2 1342 aaPredicted RBP27.63■■■□□ 2.01
LDLRAD4-215ENST00000590371 IQGAP1P46940 1657 aa27.62■■■□□ 2.01
LDLRAD4-215ENST00000590371 LTBP4Q8N2S1 1624 aa27.61■■■□□ 2.01
LDLRAD4-215ENST00000590371 EID1Q9Y6B2 187 aa27.61■■■□□ 2.01
LDLRAD4-215ENST00000590371 MED14O60244 1454 aa27.61■■■□□ 2.01
LDLRAD4-215ENST00000590371 SLIT1O75093 1534 aa27.61■■■□□ 2.01
LDLRAD4-215ENST00000590371 SCAF11Q99590 1463 aaKnown RBP27.6■■■□□ 2.01
LDLRAD4-215ENST00000590371 ADGRB3O60242 1522 aa27.6■■■□□ 2.01
LDLRAD4-215ENST00000590371 ARHGAP23Q9P227 1491 aa27.59■■■□□ 2.01
LDLRAD4-215ENST00000590371 TXNDC2Q86VQ3 553 aa27.59■■■□□ 2.01
LDLRAD4-215ENST00000590371 TRIM52Q96A61 297 aa27.59■■■□□ 2.01
LDLRAD4-215ENST00000590371 TMEM2Q9UHN6 1383 aa27.57■■■□□ 2
LDLRAD4-215ENST00000590371 LTKP29376 864 aa27.55■■■□□ 2
LDLRAD4-215ENST00000590371 CHGAP10645 457 aaKnown RBP27.54■■■□□ 2
LDLRAD4-215ENST00000590371 MYO5BQ9ULV0 1848 aa27.53■■■□□ 2
LDLRAD4-215ENST00000590371 SPHKAPQ2M3C7 1700 aa27.52■■■□□ 2
LDLRAD4-215ENST00000590371 TMEM131LA2VDJ0 1609 aa27.49■■□□□ 1.99
LDLRAD4-215ENST00000590371 IQSEC2Q5JU85 1478 aa27.48■■□□□ 1.99
LDLRAD4-215ENST00000590371 CPS1P31327 1500 aa27.46■■□□□ 1.99
LDLRAD4-215ENST00000590371 SLC4A1APQ9BWU0 796 aaKnown RBP27.45■■□□□ 1.98
LDLRAD4-215ENST00000590371 PPP1R15AO75807 674 aaPredicted RBP27.44■■□□□ 1.98
LDLRAD4-215ENST00000590371 HDGFP51858 240 aaKnown RBP27.44■■□□□ 1.98
LDLRAD4-215ENST00000590371 BCANQ96GW7 911 aa27.44■■□□□ 1.98
LDLRAD4-215ENST00000590371 RIMS2Q9UQ26 1411 aa27.42■■□□□ 1.98
LDLRAD4-215ENST00000590371 ZFYVE9O95405 1425 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms