RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 NCOA1Q15788 1441 aa11.9□□□□□ -0.5
NPC1-208ENST00000590301 CERKQ8TCT0 537 aa11.9□□□□□ -0.5
NPC1-208ENST00000590301 KCNA4P22459 653 aa11.89□□□□□ -0.51
NPC1-208ENST00000590301 WASHC2CQ9Y4E1 1318 aa11.88□□□□□ -0.51
NPC1-208ENST00000590301 KDM5DQ9BY66 1539 aa11.88□□□□□ -0.51
NPC1-208ENST00000590301 MAST1Q9Y2H9 1570 aa11.88□□□□□ -0.51
NPC1-208ENST00000590301 SETD1BQ9UPS6 1966 aaKnown RBP11.87□□□□□ -0.51
NPC1-208ENST00000590301 PKD2Q13563 968 aa11.87□□□□□ -0.51
NPC1-208ENST00000590301 PLA2R1Q13018 1463 aa11.87□□□□□ -0.51
NPC1-208ENST00000590301 PZPP20742 1482 aa11.86□□□□□ -0.51
NPC1-208ENST00000590301 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
NPC1-208ENST00000590301 TNRQ92752 1358 aa11.85□□□□□ -0.51
NPC1-208ENST00000590301 CLTCQ00610 1675 aaKnown RBP11.84□□□□□ -0.51
NPC1-208ENST00000590301 A2ML1A8K2U0 1454 aa11.84□□□□□ -0.51
NPC1-208ENST00000590301 FGD6Q6ZV73 1430 aa11.84□□□□□ -0.51
NPC1-208ENST00000590301 CEP170BQ9Y4F5 1589 aaPredicted RBP11.84□□□□□ -0.51
NPC1-208ENST00000590301 CAMSAP1Q5T5Y3 1602 aa11.83□□□□□ -0.52
NPC1-208ENST00000590301 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.52
NPC1-208ENST00000590301 KIF15Q9NS87 1388 aa11.82□□□□□ -0.52
NPC1-208ENST00000590301 DUOX2Q9NRD8 1548 aa11.82□□□□□ -0.52
NPC1-208ENST00000590301 FBXO31Q5XUX0 539 aaPredicted RBP11.82□□□□□ -0.52
NPC1-208ENST00000590301 ABCC5O15440 1437 aa11.82□□□□□ -0.52
NPC1-208ENST00000590301 NLRP1Q9C000 1473 aa11.82□□□□□ -0.52
NPC1-208ENST00000590301 MYO3AQ8NEV4 1616 aa11.82□□□□□ -0.52
NPC1-208ENST00000590301 STRCQ7RTU9 1775 aa11.82□□□□□ -0.52
NPC1-208ENST00000590301 ERBINQ96RT1 1412 aa11.81□□□□□ -0.52
NPC1-208ENST00000590301 IQSEC2Q5JU85 1478 aa11.81□□□□□ -0.52
NPC1-208ENST00000590301 NCKAP5LQ9HCH0 1330 aa11.81□□□□□ -0.52
NPC1-208ENST00000590301 ZNF142P52746 1687 aaPredicted RBP11.81□□□□□ -0.52
NPC1-208ENST00000590301 RNF17Q9BXT8 1623 aaKnown RBP11.8□□□□□ -0.52
NPC1-208ENST00000590301 EIF2AK4Q9P2K8 1649 aaKnown RBP11.8□□□□□ -0.52
NPC1-208ENST00000590301 THEMISQ8N1K5 641 aaPredicted RBP11.8□□□□□ -0.52
NPC1-208ENST00000590301 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
NPC1-208ENST00000590301 DAPK1P53355 1430 aa11.79□□□□□ -0.52
NPC1-208ENST00000590301 ABCC3O15438 1527 aa11.79□□□□□ -0.52
NPC1-208ENST00000590301 RRP7BPQ9NSQ0 103 aa11.78□□□□□ -0.52
NPC1-208ENST00000590301 PTPN23Q9H3S7 1636 aa11.78□□□□□ -0.52
NPC1-208ENST00000590301 ANKLE2Q86XL3 938 aa11.77□□□□□ -0.53
NPC1-208ENST00000590301 LTBP4Q8N2S1 1624 aa11.77□□□□□ -0.53
NPC1-208ENST00000590301 KANK1Q14678 1352 aa11.77□□□□□ -0.53
NPC1-208ENST00000590301 ARHGAP31Q2M1Z3 1444 aa11.77□□□□□ -0.53
NPC1-208ENST00000590301 ZC3H13Q5T200 1668 aaKnown RBP11.76□□□□□ -0.53
NPC1-208ENST00000590301 DNMT1P26358 1616 aaKnown RBP11.75□□□□□ -0.53
NPC1-208ENST00000590301 ERVK-7P63135 1459 aa11.75□□□□□ -0.53
NPC1-208ENST00000590301 PRDM15P57071 1507 aaPredicted RBP11.75□□□□□ -0.53
NPC1-208ENST00000590301 SPATA31D1Q6ZQQ2 1576 aa11.75□□□□□ -0.53
NPC1-208ENST00000590301 ZNF335Q9H4Z2 1342 aaPredicted RBP11.74□□□□□ -0.53
NPC1-208ENST00000590301 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.53
NPC1-208ENST00000590301 ADGRL2O95490 1459 aa11.74□□□□□ -0.53
NPC1-208ENST00000590301 UGGT1Q9NYU2 1555 aa11.74□□□□□ -0.53
NPC1-208ENST00000590301 MROH1Q8NDA8 1641 aa11.74□□□□□ -0.53
NPC1-208ENST00000590301 MED14O60244 1454 aa11.72□□□□□ -0.53
NPC1-208ENST00000590301 FAM50AQ14320 339 aaKnown RBP11.72□□□□□ -0.53
NPC1-208ENST00000590301 CHIC2Q9UKJ5 165 aa11.72□□□□□ -0.53
NPC1-208ENST00000590301 LMTK2Q8IWU2 1503 aa11.71□□□□□ -0.53
NPC1-208ENST00000590301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.71□□□□□ -0.53
NPC1-208ENST00000590301 CROCC2H7BZ55 1655 aa11.71□□□□□ -0.54
NPC1-208ENST00000590301 NPHP4O75161 1426 aaPredicted RBP11.7□□□□□ -0.54
NPC1-208ENST00000590301 CPS1P31327 1500 aa11.69□□□□□ -0.54
NPC1-208ENST00000590301 ANKRD50Q9ULJ7 1429 aa11.69□□□□□ -0.54
NPC1-208ENST00000590301 DEPDC5O75140 1603 aa11.68□□□□□ -0.54
NPC1-208ENST00000590301 NEURL4Q96JN8 1562 aa11.68□□□□□ -0.54
NPC1-208ENST00000590301 ROCK1Q13464 1354 aa11.67□□□□□ -0.54
NPC1-208ENST00000590301 VWDEQ8N2E2 1590 aa11.67□□□□□ -0.54
NPC1-208ENST00000590301 UBAP1LF5GYI3 381 aa11.67□□□□□ -0.54
NPC1-208ENST00000590301 EID1Q9Y6B2 187 aa11.67□□□□□ -0.54
NPC1-208ENST00000590301 SLC52A1Q9NWF4 448 aa11.66□□□□□ -0.54
NPC1-208ENST00000590301 RPRD2Q5VT52 1461 aaKnown RBP11.65□□□□□ -0.54
NPC1-208ENST00000590301 SCAF11Q99590 1463 aaKnown RBP11.65□□□□□ -0.54
NPC1-208ENST00000590301 ARHGAP23Q9P227 1491 aa11.65□□□□□ -0.54
NPC1-208ENST00000590301 SLIT1O75093 1534 aa11.65□□□□□ -0.55
NPC1-208ENST00000590301 NOS1P29475 1434 aa11.64□□□□□ -0.55
NPC1-208ENST00000590301 TXNDC2Q86VQ3 553 aa11.64□□□□□ -0.55
NPC1-208ENST00000590301 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
NPC1-208ENST00000590301 EFCAB6Q5THR3 1501 aa11.64□□□□□ -0.55
NPC1-208ENST00000590301 TMEM2Q9UHN6 1383 aa11.64□□□□□ -0.55
NPC1-208ENST00000590301 TOM1O60784 492 aa11.63□□□□□ -0.55
NPC1-208ENST00000590301 IDI1Q13907 227 aa11.63□□□□□ -0.55
NPC1-208ENST00000590301 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
NPC1-208ENST00000590301 CEP152O94986 1710 aa11.61□□□□□ -0.55
NPC1-208ENST00000590301 LTKP29376 864 aa11.61□□□□□ -0.55
NPC1-208ENST00000590301 IQGAP1P46940 1657 aa11.59□□□□□ -0.55
NPC1-208ENST00000590301 HDGFP51858 240 aaKnown RBP11.59□□□□□ -0.55
NPC1-208ENST00000590301 UBR1Q8IWV7 1749 aa11.59□□□□□ -0.55
NPC1-208ENST00000590301 KDM5AP29375 1690 aaKnown RBP11.58□□□□□ -0.56
NPC1-208ENST00000590301 ADGRB3O60242 1522 aa11.57□□□□□ -0.56
NPC1-208ENST00000590301 SYNMO15061 1565 aa11.57□□□□□ -0.56
NPC1-208ENST00000590301 NUP155O75694 1391 aa11.56□□□□□ -0.56
NPC1-208ENST00000590301 DISP3Q9P2K9 1392 aa11.56□□□□□ -0.56
NPC1-208ENST00000590301 LRRC7Q96NW7 1537 aa11.56□□□□□ -0.56
NPC1-208ENST00000590301 UNC13BO14795 1591 aa11.56□□□□□ -0.56
NPC1-208ENST00000590301 SLC4A1APQ9BWU0 796 aaKnown RBP11.56□□□□□ -0.56
NPC1-208ENST00000590301 PIK3C2BO00750 1634 aa11.56□□□□□ -0.56
NPC1-208ENST00000590301 RRBP1Q9P2E9 1410 aaKnown RBP11.55□□□□□ -0.56
NPC1-208ENST00000590301 ITGAEP38570 1179 aa11.55□□□□□ -0.56
NPC1-208ENST00000590301 PIP4K2BP78356 416 aa11.55□□□□□ -0.56
NPC1-208ENST00000590301 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.55□□□□□ -0.56
NPC1-208ENST00000590301 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
NPC1-208ENST00000590301 KCNA6P17658 529 aa11.54□□□□□ -0.56
NPC1-208ENST00000590301 TET3O43151 1660 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms