RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-213	ENST00000589933	PKD2	Q13563	968 aa		33.17	■■■□□ 2.9
TMC6-213	ENST00000589933	WASHC2C	Q9Y4E1	1318 aa		33.17	■■■□□ 2.9
TMC6-213	ENST00000589933	PLA2R1	Q13018	1463 aa		33.17	■■■□□ 2.9
TMC6-213	ENST00000589933	MIA2	Q96PC5	1412 aa		33.16	■■■□□ 2.9
TMC6-213	ENST00000589933	MYOM3	Q5VTT5	1437 aa		33.14	■■■□□ 2.9
TMC6-213	ENST00000589933	KANK4	Q5T7N3	995 aa	Predicted RBP	33.14	■■■□□ 2.9
TMC6-213	ENST00000589933	MAST1	Q9Y2H9	1570 aa		33.13	■■■□□ 2.89
TMC6-213	ENST00000589933	NCKAP5L	Q9HCH0	1330 aa		33.12	■■■□□ 2.89
TMC6-213	ENST00000589933	A2ML1	A8K2U0	1454 aa		33.12	■■■□□ 2.89
TMC6-213	ENST00000589933	PZP	P20742	1482 aa		33.09	■■■□□ 2.89
TMC6-213	ENST00000589933	TNR	Q92752	1358 aa		33.09	■■■□□ 2.89
TMC6-213	ENST00000589933	LTBP4	Q8N2S1	1624 aa		33.06	■■■□□ 2.88
TMC6-213	ENST00000589933	IQSEC2	Q5JU85	1478 aa		33.06	■■■□□ 2.88
TMC6-213	ENST00000589933	DNMT1	P26358	1616 aa	Known RBP	33.06	■■■□□ 2.88
TMC6-213	ENST00000589933	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.04	■■■□□ 2.88
TMC6-213	ENST00000589933	TCOF1	Q13428	1488 aa	Known RBP	33.04	■■■□□ 2.88
TMC6-213	ENST00000589933	RNF17	Q9BXT8	1623 aa	Known RBP	33.02	■■■□□ 2.88
TMC6-213	ENST00000589933	ZC3H13	Q5T200	1668 aa	Known RBP	33.02	■■■□□ 2.88
TMC6-213	ENST00000589933	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.02	■■■□□ 2.88
TMC6-213	ENST00000589933	POLR1A	O95602	1720 aa	Predicted RBP	32.98	■■■□□ 2.87
TMC6-213	ENST00000589933	NLRP1	Q9C000	1473 aa		32.96	■■■□□ 2.87
TMC6-213	ENST00000589933	DUOX2	Q9NRD8	1548 aa		32.96	■■■□□ 2.87
TMC6-213	ENST00000589933	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.95	■■■□□ 2.87
TMC6-213	ENST00000589933	PTPN23	Q9H3S7	1636 aa		32.95	■■■□□ 2.86
TMC6-213	ENST00000589933	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.94	■■■□□ 2.86
TMC6-213	ENST00000589933	ABCC3	O15438	1527 aa		32.92	■■■□□ 2.86
TMC6-213	ENST00000589933	CROCC2	H7BZ55	1655 aa		32.91	■■■□□ 2.86
TMC6-213	ENST00000589933	ANKLE2	Q86XL3	938 aa		32.9	■■■□□ 2.86
TMC6-213	ENST00000589933	SHANK2	Q9UPX8	1470 aa		32.9	■■■□□ 2.86
TMC6-213	ENST00000589933	CFAP65	Q6ZU64	1925 aa	Known RBP	32.89	■■■□□ 2.86
TMC6-213	ENST00000589933	UGGT1	Q9NYU2	1555 aa		32.89	■■■□□ 2.86
TMC6-213	ENST00000589933	CEP152	O94986	1710 aa		32.87	■■■□□ 2.85
TMC6-213	ENST00000589933	KIF15	Q9NS87	1388 aa		32.86	■■■□□ 2.85
TMC6-213	ENST00000589933	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.83	■■■□□ 2.85	6e-8	■■■□□ 16.2
TMC6-213	ENST00000589933	SPATA31D1	Q6ZQQ2	1576 aa		32.83	■■■□□ 2.85
TMC6-213	ENST00000589933	ABCC5	O15440	1437 aa		32.83	■■■□□ 2.85
TMC6-213	ENST00000589933	FGD6	Q6ZV73	1430 aa		32.83	■■■□□ 2.85
TMC6-213	ENST00000589933	ERBIN	Q96RT1	1412 aa		32.83	■■■□□ 2.85
TMC6-213	ENST00000589933	MROH1	Q8NDA8	1641 aa		32.82	■■■□□ 2.84
TMC6-213	ENST00000589933	DAPK1	P53355	1430 aa		32.81	■■■□□ 2.84
TMC6-213	ENST00000589933	RRP7BP	Q9NSQ0	103 aa		32.81	■■■□□ 2.84
TMC6-213	ENST00000589933	NEURL4	Q96JN8	1562 aa		32.8	■■■□□ 2.84
TMC6-213	ENST00000589933	UBAP1L	F5GYI3	381 aa		32.8	■■■□□ 2.84
TMC6-213	ENST00000589933	DEPDC5	O75140	1603 aa		32.79	■■■□□ 2.84
TMC6-213	ENST00000589933	ERVK-7	P63135	1459 aa		32.79	■■■□□ 2.84
TMC6-213	ENST00000589933	KANK1	Q14678	1352 aa		32.77	■■■□□ 2.84
TMC6-213	ENST00000589933	ANKRD30A	Q9BXX3	1397 aa		32.76	■■■□□ 2.83
TMC6-213	ENST00000589933	CPS1	P31327	1500 aa		32.76	■■■□□ 2.83
TMC6-213	ENST00000589933	PRDM15	P57071	1507 aa	Predicted RBP	32.75	■■■□□ 2.83
TMC6-213	ENST00000589933	NPHP4	O75161	1426 aa	Predicted RBP	32.73	■■■□□ 2.83
TMC6-213	ENST00000589933	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.72	■■■□□ 2.83
TMC6-213	ENST00000589933	MED14	O60244	1454 aa		32.72	■■■□□ 2.83
TMC6-213	ENST00000589933	IQGAP1	P46940	1657 aa		32.71	■■■□□ 2.83
TMC6-213	ENST00000589933	DISP3	Q9P2K9	1392 aa		32.7	■■■□□ 2.83
TMC6-213	ENST00000589933	ARHGAP31	Q2M1Z3	1444 aa		32.7	■■■□□ 2.83
TMC6-213	ENST00000589933	CHIC2	Q9UKJ5	165 aa		32.69	■■■□□ 2.82
TMC6-213	ENST00000589933	UBR1	Q8IWV7	1749 aa		32.67	■■■□□ 2.82
TMC6-213	ENST00000589933	TOM1	O60784	492 aa		32.64	■■■□□ 2.82
TMC6-213	ENST00000589933	FAM50A	Q14320	339 aa	Known RBP	32.63	■■■□□ 2.81
TMC6-213	ENST00000589933	VWDE	Q8N2E2	1590 aa		32.61	■■■□□ 2.81
TMC6-213	ENST00000589933	STAG3	Q9UJ98	1225 aa		32.59	■■■□□ 2.81
TMC6-213	ENST00000589933	SCAF1	Q9H7N4	1312 aa	Known RBP	32.58	■■■□□ 2.81
TMC6-213	ENST00000589933	EID1	Q9Y6B2	187 aa		32.57	■■■□□ 2.8
TMC6-213	ENST00000589933	ADGRL2	O95490	1459 aa		32.56	■■■□□ 2.8
TMC6-213	ENST00000589933	SCAF11	Q99590	1463 aa	Known RBP	32.56	■■■□□ 2.8
TMC6-213	ENST00000589933	LMTK2	Q8IWU2	1503 aa		32.55	■■■□□ 2.8
TMC6-213	ENST00000589933	TXNDC2	Q86VQ3	553 aa		32.54	■■■□□ 2.8
TMC6-213	ENST00000589933	SLIT1	O75093	1534 aa		32.52	■■■□□ 2.8
TMC6-213	ENST00000589933	PIK3C2B	O00750	1634 aa		32.51	■■■□□ 2.8
TMC6-213	ENST00000589933	PIP4K2B	P78356	416 aa		32.51	■■■□□ 2.79
TMC6-213	ENST00000589933	KDM5A	P29375	1690 aa	Known RBP	32.5	■■■□□ 2.79
TMC6-213	ENST00000589933	ARHGAP23	Q9P227	1491 aa		32.5	■■■□□ 2.79
TMC6-213	ENST00000589933	SYNM	O15061	1565 aa		32.49	■■■□□ 2.79
TMC6-213	ENST00000589933	ANKRD50	Q9ULJ7	1429 aa		32.47	■■■□□ 2.79
TMC6-213	ENST00000589933	EFCAB6	Q5THR3	1501 aa		32.46	■■■□□ 2.79
TMC6-213	ENST00000589933	STRCP1	A6NGW2	1772 aa		32.45	■■■□□ 2.78
TMC6-213	ENST00000589933	LTK	P29376	864 aa		32.44	■■■□□ 2.78
TMC6-213	ENST00000589933	TMEM2	Q9UHN6	1383 aa		32.43	■■■□□ 2.78
TMC6-213	ENST00000589933	IDI1	Q13907	227 aa		32.42	■■■□□ 2.78
TMC6-213	ENST00000589933	SLC52A1	Q9NWF4	448 aa		32.41	■■■□□ 2.78
TMC6-213	ENST00000589933	LRRC7	Q96NW7	1537 aa		32.4	■■■□□ 2.78
TMC6-213	ENST00000589933	RPRD2	Q5VT52	1461 aa	Known RBP	32.39	■■■□□ 2.78
TMC6-213	ENST00000589933	NOS1	P29475	1434 aa		32.38	■■■□□ 2.77
TMC6-213	ENST00000589933	HSPA1L	P34931	641 aa		32.37	■■■□□ 2.77
TMC6-213	ENST00000589933	ILDR2	Q71H61	639 aa		32.36	■■■□□ 2.77
TMC6-213	ENST00000589933	TET3	O43151	1660 aa		32.36	■■■□□ 2.77
TMC6-213	ENST00000589933	GCC2	Q8IWJ2	1684 aa		32.34	■■■□□ 2.77
TMC6-213	ENST00000589933	ADGRB3	O60242	1522 aa		32.33	■■■□□ 2.77
TMC6-213	ENST00000589933	ROCK1	Q13464	1354 aa		32.31	■■■□□ 2.76
TMC6-213	ENST00000589933	HDGF	P51858	240 aa	Known RBP	32.3	■■■□□ 2.76
TMC6-213	ENST00000589933	UNC13B	O14795	1591 aa		32.29	■■■□□ 2.76
TMC6-213	ENST00000589933	SOCS7	O14512	581 aa		32.28	■■■□□ 2.76
TMC6-213	ENST00000589933	BCAN	Q96GW7	911 aa		32.28	■■■□□ 2.76
TMC6-213	ENST00000589933	ALK	Q9UM73	1620 aa		32.24	■■■□□ 2.75
TMC6-213	ENST00000589933	MYO5B	Q9ULV0	1848 aa		32.23	■■■□□ 2.75
TMC6-213	ENST00000589933	XIRP1	Q702N8	1843 aa	Known RBP	32.22	■■■□□ 2.75
TMC6-213	ENST00000589933	KCNA6	P17658	529 aa		32.22	■■■□□ 2.75
TMC6-213	ENST00000589933	ITGAE	P38570	1179 aa		32.21	■■■□□ 2.75
TMC6-213	ENST00000589933	PPP1R15A	O75807	674 aa	Predicted RBP	32.2	■■■□□ 2.75
TMC6-213	ENST00000589933	SLC26A8	Q96RN1	970 aa		32.2	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms