RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 POLR1AO95602 1720 aaPredicted RBP18.32■□□□□ 0.52
TOMM40-204ENST00000589253 TOM1O60784 492 aa18.32■□□□□ 0.52
TOMM40-204ENST00000589253 CPS1P31327 1500 aa18.32■□□□□ 0.52
TOMM40-204ENST00000589253 RTEL1-TNFRSF6BF6WH68 1400 aa18.32■□□□□ 0.52
TOMM40-204ENST00000589253 PIP4K2BP78356 416 aa18.31■□□□□ 0.52
TOMM40-204ENST00000589253 DHX29Q7Z478 1369 aaKnown RBP18.3■□□□□ 0.52
TOMM40-204ENST00000589253 TNRQ92752 1358 aa18.3■□□□□ 0.52
TOMM40-204ENST00000589253 KANK4Q5T7N3 995 aaPredicted RBP18.29■□□□□ 0.52
TOMM40-204ENST00000589253 KDM5DQ9BY66 1539 aa18.28■□□□□ 0.52
TOMM40-204ENST00000589253 FAM135AQ9P2D6 1515 aa18.28■□□□□ 0.52
TOMM40-204ENST00000589253 ZNF644Q9H582 1327 aaPredicted RBP18.28■□□□□ 0.52
TOMM40-204ENST00000589253 MBD5Q9P267 1494 aa18.27■□□□□ 0.52
TOMM40-204ENST00000589253 KIF3BO15066 747 aa18.27■□□□□ 0.52
TOMM40-204ENST00000589253 PZPP20742 1482 aa18.26■□□□□ 0.51
TOMM40-204ENST00000589253 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
TOMM40-204ENST00000589253 HSPA1LP34931 641 aa18.26■□□□□ 0.51
TOMM40-204ENST00000589253 ANKLE2Q86XL3 938 aa18.26■□□□□ 0.51
TOMM40-204ENST00000589253 NCOA2Q15596 1464 aa18.26■□□□□ 0.51
TOMM40-204ENST00000589253 MED1Q15648 1581 aaPredicted RBP18.25■□□□□ 0.51
TOMM40-204ENST00000589253 WASHC2CQ9Y4E1 1318 aa18.25■□□□□ 0.51
TOMM40-204ENST00000589253 CCDC141Q6ZP82 1450 aa18.25■□□□□ 0.51
TOMM40-204ENST00000589253 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
TOMM40-204ENST00000589253 THEMISQ8N1K5 641 aaPredicted RBP18.24■□□□□ 0.51
TOMM40-204ENST00000589253 FBXO31Q5XUX0 539 aaPredicted RBP18.23■□□□□ 0.51
TOMM40-204ENST00000589253 NLRP1Q9C000 1473 aa18.22■□□□□ 0.51
TOMM40-204ENST00000589253 RSPH4AQ5TD94 716 aa18.22■□□□□ 0.51
TOMM40-204ENST00000589253 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
TOMM40-204ENST00000589253 UGGT1Q9NYU2 1555 aa18.21■□□□□ 0.51
TOMM40-204ENST00000589253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.21■□□□□ 0.51
TOMM40-204ENST00000589253 CAMSAP2Q08AD1 1489 aa18.2■□□□□ 0.5
TOMM40-204ENST00000589253 NPHP4O75161 1426 aaPredicted RBP18.19■□□□□ 0.5
TOMM40-204ENST00000589253 MIA2Q96PC5 1412 aa18.19■□□□□ 0.5
TOMM40-204ENST00000589253 DEPDC5O75140 1603 aa18.19■□□□□ 0.5
TOMM40-204ENST00000589253 VWDEQ8N2E2 1590 aa18.17■□□□□ 0.5
TOMM40-204ENST00000589253 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
TOMM40-204ENST00000589253 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
TOMM40-204ENST00000589253 APLP2Q06481 763 aa18.17■□□□□ 0.5
TOMM40-204ENST00000589253 IQGAP1P46940 1657 aa18.16■□□□□ 0.5
TOMM40-204ENST00000589253 MED14O60244 1454 aa18.16■□□□□ 0.5
TOMM40-204ENST00000589253 ARHGEF5Q12774 1597 aa18.13■□□□□ 0.49
TOMM40-204ENST00000589253 ZC3H13Q5T200 1668 aaKnown RBP18.13■□□□□ 0.49
TOMM40-204ENST00000589253 SYNMO15061 1565 aa18.12■□□□□ 0.49
TOMM40-204ENST00000589253 MYOM3Q5VTT5 1437 aa18.11■□□□□ 0.49
TOMM40-204ENST00000589253 RNF17Q9BXT8 1623 aaKnown RBP18.11■□□□□ 0.49
TOMM40-204ENST00000589253 SENP3Q9H4L4 574 aaPredicted RBP18.09■□□□□ 0.49
TOMM40-204ENST00000589253 ABCC3O15438 1527 aa18.08■□□□□ 0.49
TOMM40-204ENST00000589253 PPARGC1BQ86YN6 1023 aaKnown RBP18.08■□□□□ 0.48
TOMM40-204ENST00000589253 PTPN23Q9H3S7 1636 aa18.08■□□□□ 0.48
TOMM40-204ENST00000589253 EIF2AK4Q9P2K8 1649 aaKnown RBP18.07■□□□□ 0.48
TOMM40-204ENST00000589253 LRRC7Q96NW7 1537 aa18.07■□□□□ 0.48
TOMM40-204ENST00000589253 ALKQ9UM73 1620 aa18.06■□□□□ 0.48
TOMM40-204ENST00000589253 ERVK-7P63135 1459 aa18.06■□□□□ 0.48
TOMM40-204ENST00000589253 MAST1Q9Y2H9 1570 aa18.04■□□□□ 0.48
TOMM40-204ENST00000589253 FGD6Q6ZV73 1430 aa18.04■□□□□ 0.48
TOMM40-204ENST00000589253 SCAF11Q99590 1463 aaKnown RBP18.03■□□□□ 0.48
TOMM40-204ENST00000589253 STRCP1A6NGW2 1772 aa18.03■□□□□ 0.48
TOMM40-204ENST00000589253 UBR1Q8IWV7 1749 aa18.02■□□□□ 0.48
TOMM40-204ENST00000589253 CROCC2H7BZ55 1655 aa18.02■□□□□ 0.47
TOMM40-204ENST00000589253 CEP152O94986 1710 aa18.01■□□□□ 0.47
TOMM40-204ENST00000589253 EID1Q9Y6B2 187 aa18■□□□□ 0.47
TOMM40-204ENST00000589253 DUOX2Q9NRD8 1548 aa17.98■□□□□ 0.47
TOMM40-204ENST00000589253 TXNDC2Q86VQ3 553 aa17.98■□□□□ 0.47
TOMM40-204ENST00000589253 MROH1Q8NDA8 1641 aa17.98■□□□□ 0.47
TOMM40-204ENST00000589253 STAG3Q9UJ98 1225 aa17.96■□□□□ 0.47
TOMM40-204ENST00000589253 SLIT1O75093 1534 aa17.96■□□□□ 0.47
TOMM40-204ENST00000589253 CFAP65Q6ZU64 1925 aaKnown RBP17.95■□□□□ 0.46
TOMM40-204ENST00000589253 ARHGAP23Q9P227 1491 aa17.95■□□□□ 0.46
TOMM40-204ENST00000589253 ARHGAP31Q2M1Z3 1444 aa17.93■□□□□ 0.46
TOMM40-204ENST00000589253 LTKP29376 864 aa17.93■□□□□ 0.46
TOMM40-204ENST00000589253 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
TOMM40-204ENST00000589253 KANK1Q14678 1352 aa17.91■□□□□ 0.46
TOMM40-204ENST00000589253 KIF15Q9NS87 1388 aa17.91■□□□□ 0.46
TOMM40-204ENST00000589253 ERBINQ96RT1 1412 aa17.91■□□□□ 0.46
TOMM40-204ENST00000589253 RRBP1Q9P2E9 1410 aaKnown RBP17.91■□□□□ 0.46
TOMM40-204ENST00000589253 ABCC5O15440 1437 aa17.89■□□□□ 0.46
TOMM40-204ENST00000589253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.89■□□□□ 0.45
TOMM40-204ENST00000589253 PIK3C2BO00750 1634 aa17.89■□□□□ 0.45
TOMM40-204ENST00000589253 TMEM2Q9UHN6 1383 aa17.89■□□□□ 0.45
TOMM40-204ENST00000589253 DAPK1P53355 1430 aa17.89■□□□□ 0.45
TOMM40-204ENST00000589253 FAM135BQ49AJ0 1406 aa17.89■□□□□ 0.45
TOMM40-204ENST00000589253 XIRP1Q702N8 1843 aaKnown RBP17.88■□□□□ 0.45
TOMM40-204ENST00000589253 RRP7BPQ9NSQ0 103 aa17.87■□□□□ 0.45
TOMM40-204ENST00000589253 EFCAB6Q5THR3 1501 aa17.87■□□□□ 0.45
TOMM40-204ENST00000589253 RGS17Q9UGC6 210 aaPredicted RBP17.86■□□□□ 0.45
TOMM40-204ENST00000589253 KDM5AP29375 1690 aaKnown RBP17.86■□□□□ 0.45
TOMM40-204ENST00000589253 TMEM94Q12767 1356 aa17.85■□□□□ 0.45
TOMM40-204ENST00000589253 ROBO1Q9Y6N7 1651 aa17.83■□□□□ 0.45
TOMM40-204ENST00000589253 KCNA6P17658 529 aa17.83■□□□□ 0.44
TOMM40-204ENST00000589253 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
TOMM40-204ENST00000589253 PROSER2Q86WR7 435 aaPredicted RBP17.83■□□□□ 0.44
TOMM40-204ENST00000589253 BCANQ96GW7 911 aa17.83■□□□□ 0.44
TOMM40-204ENST00000589253 NKTRP30414 1462 aaKnown RBP17.81■□□□□ 0.44
TOMM40-204ENST00000589253 MSH6P52701 1360 aa17.8■□□□□ 0.44
TOMM40-204ENST00000589253 SLC26A8Q96RN1 970 aa17.8■□□□□ 0.44
TOMM40-204ENST00000589253 LMTK2Q8IWU2 1503 aa17.79■□□□□ 0.44
TOMM40-204ENST00000589253 IDI1Q13907 227 aa17.79■□□□□ 0.44
TOMM40-204ENST00000589253 ADGRL2O95490 1459 aa17.79■□□□□ 0.44
TOMM40-204ENST00000589253 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
TOMM40-204ENST00000589253 ADGRB3O60242 1522 aa17.78■□□□□ 0.44
TOMM40-204ENST00000589253 POTEAQ6S8J7 498 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms