RNA–Protein interactions for RNA: ENST00000589017.5

PRKAR1A-216, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 1,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-216ENST00000589017 ABCC5O15440 1437 aa29.03■■■□□ 2.24
PRKAR1A-216ENST00000589017 PTPRKQ15262 1439 aa29.03■■■□□ 2.24
PRKAR1A-216ENST00000589017 DAPK1P53355 1430 aa29.02■■■□□ 2.24
PRKAR1A-216ENST00000589017 STRCQ7RTU9 1775 aa29.01■■■□□ 2.23
PRKAR1A-216ENST00000589017 MYO3AQ8NEV4 1616 aa29.01■■■□□ 2.23
PRKAR1A-216ENST00000589017 DUOX2Q9NRD8 1548 aa28.99■■■□□ 2.23
PRKAR1A-216ENST00000589017 ZNF142P52746 1687 aaPredicted RBP28.99■■■□□ 2.23
PRKAR1A-216ENST00000589017 ZC3H13Q5T200 1668 aaKnown RBP28.96■■■□□ 2.23
PRKAR1A-216ENST00000589017 MROH1Q8NDA8 1641 aa28.94■■■□□ 2.22
PRKAR1A-216ENST00000589017 PZPP20742 1482 aa28.93■■■□□ 2.22
PRKAR1A-216ENST00000589017 KIF15Q9NS87 1388 aa28.93■■■□□ 2.22
PRKAR1A-216ENST00000589017 WASHC2CQ9Y4E1 1318 aa28.93■■■□□ 2.22
PRKAR1A-216ENST00000589017 CEP170BQ9Y4F5 1589 aaPredicted RBP28.92■■■□□ 2.22
PRKAR1A-216ENST00000589017 ABCC3O15438 1527 aa28.9■■■□□ 2.22
PRKAR1A-216ENST00000589017 ERBINQ96RT1 1412 aa28.9■■■□□ 2.22
PRKAR1A-216ENST00000589017 CAMSAP1Q5T5Y3 1602 aa28.88■■■□□ 2.21
PRKAR1A-216ENST00000589017 NCOA1Q15788 1441 aa28.87■■■□□ 2.21
PRKAR1A-216ENST00000589017 ILDR1Q86SU0 546 aaPredicted RBP28.86■■■□□ 2.21
PRKAR1A-216ENST00000589017 CEP152O94986 1710 aa28.86■■■□□ 2.21
PRKAR1A-216ENST00000589017 PRDM15P57071 1507 aaPredicted RBP28.85■■■□□ 2.21
PRKAR1A-216ENST00000589017 RRP7BPQ9NSQ0 103 aa28.85■■■□□ 2.21
PRKAR1A-216ENST00000589017 DMRT2Q9Y5R5 561 aa28.85■■■□□ 2.21
PRKAR1A-216ENST00000589017 ANKRD30AQ9BXX3 1397 aa28.85■■■□□ 2.21
PRKAR1A-216ENST00000589017 DEPDC5O75140 1603 aa28.84■■■□□ 2.21
PRKAR1A-216ENST00000589017 ADGRL2O95490 1459 aa28.84■■■□□ 2.21
PRKAR1A-216ENST00000589017 A2ML1A8K2U0 1454 aa28.83■■■□□ 2.21
PRKAR1A-216ENST00000589017 FAM50AQ14320 339 aaKnown RBP28.82■■■□□ 2.2
PRKAR1A-216ENST00000589017 TNRQ92752 1358 aa28.82■■■□□ 2.2
PRKAR1A-216ENST00000589017 PTPRTO14522 1441 aa28.82■■■□□ 2.2
PRKAR1A-216ENST00000589017 FBXO31Q5XUX0 539 aaPredicted RBP28.81■■■□□ 2.2
PRKAR1A-216ENST00000589017 PLA2R1Q13018 1463 aa28.8■■■□□ 2.2
PRKAR1A-216ENST00000589017 CHIC2Q9UKJ5 165 aa28.8■■■□□ 2.2
PRKAR1A-216ENST00000589017 SPATA31D1Q6ZQQ2 1576 aa28.77■■■□□ 2.2
PRKAR1A-216ENST00000589017 NLRP1Q9C000 1473 aa28.74■■■□□ 2.19
PRKAR1A-216ENST00000589017 ERVK-7P63135 1459 aa28.72■■■□□ 2.19
PRKAR1A-216ENST00000589017 VWDEQ8N2E2 1590 aa28.7■■■□□ 2.18
PRKAR1A-216ENST00000589017 ARHGAP31Q2M1Z3 1444 aa28.69■■■□□ 2.18
PRKAR1A-216ENST00000589017 FBXO41Q8TF61 875 aa28.69■■■□□ 2.18
PRKAR1A-216ENST00000589017 POLR1AO95602 1720 aaPredicted RBP28.69■■■□□ 2.18
PRKAR1A-216ENST00000589017 KANK1Q14678 1352 aa28.68■■■□□ 2.18
PRKAR1A-216ENST00000589017 PKD2Q13563 968 aa28.68■■■□□ 2.18
PRKAR1A-216ENST00000589017 PPARGC1BQ86YN6 1023 aaKnown RBP28.68■■■□□ 2.18
PRKAR1A-216ENST00000589017 NCKAP5LQ9HCH0 1330 aa28.68■■■□□ 2.18
PRKAR1A-216ENST00000589017 LMTK2Q8IWU2 1503 aa28.67■■■□□ 2.18
PRKAR1A-216ENST00000589017 UGGT1Q9NYU2 1555 aa28.67■■■□□ 2.18
PRKAR1A-216ENST00000589017 CFAP65Q6ZU64 1925 aaKnown RBP28.65■■■□□ 2.18
PRKAR1A-216ENST00000589017 CERKQ8TCT0 537 aa28.65■■■□□ 2.18
PRKAR1A-216ENST00000589017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.65■■■□□ 2.18
PRKAR1A-216ENST00000589017 ANKRD50Q9ULJ7 1429 aa28.65■■■□□ 2.18
PRKAR1A-216ENST00000589017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.64■■■□□ 2.18
PRKAR1A-216ENST00000589017 ROCK1Q13464 1354 aa28.62■■■□□ 2.17
PRKAR1A-216ENST00000589017 NEURL4Q96JN8 1562 aa28.61■■■□□ 2.17
PRKAR1A-216ENST00000589017 LTBP4Q8N2S1 1624 aa28.61■■■□□ 2.17
PRKAR1A-216ENST00000589017 EFCAB6Q5THR3 1501 aa28.59■■■□□ 2.17
PRKAR1A-216ENST00000589017 THEMISQ8N1K5 641 aaPredicted RBP28.58■■■□□ 2.17
PRKAR1A-216ENST00000589017 UBR1Q8IWV7 1749 aa28.57■■■□□ 2.16
PRKAR1A-216ENST00000589017 UNC13BO14795 1591 aa28.57■■■□□ 2.16
PRKAR1A-216ENST00000589017 RRBP1Q9P2E9 1410 aaKnown RBP28.53■■■□□ 2.16
PRKAR1A-216ENST00000589017 TET3O43151 1660 aa28.51■■■□□ 2.16
PRKAR1A-216ENST00000589017 ANKLE2Q86XL3 938 aa28.5■■■□□ 2.15
PRKAR1A-216ENST00000589017 PIK3C2BO00750 1634 aa28.5■■■□□ 2.15
PRKAR1A-216ENST00000589017 GCC2Q8IWJ2 1684 aa28.49■■■□□ 2.15
PRKAR1A-216ENST00000589017 MED14O60244 1454 aa28.49■■■□□ 2.15
PRKAR1A-216ENST00000589017 ITGAEP38570 1179 aa28.49■■■□□ 2.15
PRKAR1A-216ENST00000589017 SYNMO15061 1565 aa28.49■■■□□ 2.15
PRKAR1A-216ENST00000589017 IQSEC2Q5JU85 1478 aa28.48■■■□□ 2.15
PRKAR1A-216ENST00000589017 KDM5AP29375 1690 aaKnown RBP28.48■■■□□ 2.15
PRKAR1A-216ENST00000589017 RPRD2Q5VT52 1461 aaKnown RBP28.47■■■□□ 2.15
PRKAR1A-216ENST00000589017 ZNF335Q9H4Z2 1342 aaPredicted RBP28.47■■■□□ 2.15
PRKAR1A-216ENST00000589017 NOS1P29475 1434 aa28.46■■■□□ 2.15
PRKAR1A-216ENST00000589017 IQGAP1P46940 1657 aa28.46■■■□□ 2.15
PRKAR1A-216ENST00000589017 IQGAP3Q86VI3 1631 aa28.45■■■□□ 2.14
PRKAR1A-216ENST00000589017 NPHP4O75161 1426 aaPredicted RBP28.44■■■□□ 2.14
PRKAR1A-216ENST00000589017 SLIT1O75093 1534 aa28.43■■■□□ 2.14
PRKAR1A-216ENST00000589017 ARHGAP23Q9P227 1491 aa28.43■■■□□ 2.14
PRKAR1A-216ENST00000589017 SCAF11Q99590 1463 aaKnown RBP28.39■■■□□ 2.13
PRKAR1A-216ENST00000589017 E9PCH4 1651 aa28.38■■■□□ 2.13
PRKAR1A-216ENST00000589017 ADGRB3O60242 1522 aa28.37■■■□□ 2.13
PRKAR1A-216ENST00000589017 IDI1Q13907 227 aa28.36■■■□□ 2.13
PRKAR1A-216ENST00000589017 CPS1P31327 1500 aa28.34■■■□□ 2.13
PRKAR1A-216ENST00000589017 TMEM2Q9UHN6 1383 aa28.33■■■□□ 2.13
PRKAR1A-216ENST00000589017 SLC52A1Q9NWF4 448 aa28.32■■■□□ 2.12
PRKAR1A-216ENST00000589017 STAG3Q9UJ98 1225 aa28.32■■■□□ 2.12
PRKAR1A-216ENST00000589017 NUP155O75694 1391 aa28.32■■■□□ 2.12
PRKAR1A-216ENST00000589017 NAIPQ13075 1403 aa28.29■■■□□ 2.12
PRKAR1A-216ENST00000589017 LTKP29376 864 aa28.29■■■□□ 2.12
PRKAR1A-216ENST00000589017 TXNDC2Q86VQ3 553 aa28.29■■■□□ 2.12
PRKAR1A-216ENST00000589017 EID1Q9Y6B2 187 aa28.28■■■□□ 2.12
PRKAR1A-216ENST00000589017 MYO5BQ9ULV0 1848 aa28.27■■■□□ 2.12
PRKAR1A-216ENST00000589017 STRCP1A6NGW2 1772 aa28.26■■■□□ 2.11
PRKAR1A-216ENST00000589017 TMEM131LA2VDJ0 1609 aa28.25■■■□□ 2.11
PRKAR1A-216ENST00000589017 HFM1A2PYH4 1435 aa28.23■■■□□ 2.11
PRKAR1A-216ENST00000589017 SPHKAPQ2M3C7 1700 aa28.21■■■□□ 2.11
PRKAR1A-216ENST00000589017 ZFYVE9O95405 1425 aa28.17■■■□□ 2.1
PRKAR1A-216ENST00000589017 UBAP1LF5GYI3 381 aa28.15■■■□□ 2.1
PRKAR1A-216ENST00000589017 LRRC7Q96NW7 1537 aa28.13■■■□□ 2.09
PRKAR1A-216ENST00000589017 RIMS2Q9UQ26 1411 aa28.12■■■□□ 2.09
PRKAR1A-216ENST00000589017 CHGAP10645 457 aaKnown RBP28.08■■■□□ 2.09
PRKAR1A-216ENST00000589017 PLEKHG1Q9ULL1 1385 aa28.07■■■□□ 2.08
PRKAR1A-216ENST00000589017 TRPM2O94759 1503 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms