RNA–Protein interactions for RNA: ENST00000588237.5

GRN-213, Transcript of granulin precursor, humanhuman

TSL 5

Gene GRN, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-213ENST00000588237 CAMSAP1Q5T5Y3 1602 aa20.61■□□□□ 0.89
GRN-213ENST00000588237 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
GRN-213ENST00000588237 IQSEC2Q5JU85 1478 aa20.6■□□□□ 0.89
GRN-213ENST00000588237 MAST1Q9Y2H9 1570 aa20.59■□□□□ 0.89
GRN-213ENST00000588237 NCKAP5LQ9HCH0 1330 aa20.57■□□□□ 0.88
GRN-213ENST00000588237 FGD6Q6ZV73 1430 aa20.57■□□□□ 0.88
GRN-213ENST00000588237 PKD2Q13563 968 aa20.56■□□□□ 0.88
GRN-213ENST00000588237 SPATA31D1Q6ZQQ2 1576 aa20.55■□□□□ 0.88
GRN-213ENST00000588237 WASHC2CQ9Y4E1 1318 aa20.54■□□□□ 0.88
GRN-213ENST00000588237 CROCC2H7BZ55 1655 aa20.54■□□□□ 0.88
GRN-213ENST00000588237 ZNF335Q9H4Z2 1342 aaPredicted RBP20.53■□□□□ 0.88
GRN-213ENST00000588237 FAM50AQ14320 339 aaKnown RBP20.52■□□□□ 0.88
GRN-213ENST00000588237 ABCC5O15440 1437 aa20.52■□□□□ 0.87
GRN-213ENST00000588237 UBAP1LF5GYI3 381 aa20.51■□□□□ 0.87
GRN-213ENST00000588237 RRP7BPQ9NSQ0 103 aa20.51■□□□□ 0.87
GRN-213ENST00000588237 DNMT1P26358 1616 aaKnown RBP20.51■□□□□ 0.87
GRN-213ENST00000588237 KDM5DQ9BY66 1539 aa20.51■□□□□ 0.87
GRN-213ENST00000588237 DAPK1P53355 1430 aa20.51■□□□□ 0.87
GRN-213ENST00000588237 PTPRKQ15262 1439 aa20.51■□□□□ 0.87
GRN-213ENST00000588237 TCOF1Q13428 1488 aaKnown RBP20.5■□□□□ 0.87
GRN-213ENST00000588237 CHIC2Q9UKJ5 165 aa20.5■□□□□ 0.87
GRN-213ENST00000588237 PLA2R1Q13018 1463 aa20.5■□□□□ 0.87
GRN-213ENST00000588237 MYO3AQ8NEV4 1616 aa20.49■□□□□ 0.87
GRN-213ENST00000588237 DUOX2Q9NRD8 1548 aa20.49■□□□□ 0.87
GRN-213ENST00000588237 ZNF142P52746 1687 aaPredicted RBP20.49■□□□□ 0.87
GRN-213ENST00000588237 SHANK2Q9UPX8 1470 aa20.49■□□□□ 0.87
GRN-213ENST00000588237 KIF15Q9NS87 1388 aa20.48■□□□□ 0.87
GRN-213ENST00000588237 CEP170BQ9Y4F5 1589 aaPredicted RBP20.48■□□□□ 0.87
GRN-213ENST00000588237 EIF2AK4Q9P2K8 1649 aaKnown RBP20.48■□□□□ 0.87
GRN-213ENST00000588237 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
GRN-213ENST00000588237 FAM135AQ9P2D6 1515 aa20.47■□□□□ 0.87
GRN-213ENST00000588237 RNF17Q9BXT8 1623 aaKnown RBP20.45■□□□□ 0.87
GRN-213ENST00000588237 FBXO31Q5XUX0 539 aaPredicted RBP20.45■□□□□ 0.86
GRN-213ENST00000588237 ANKRD30AQ9BXX3 1397 aa20.44■□□□□ 0.86
GRN-213ENST00000588237 CFAP65Q6ZU64 1925 aaKnown RBP20.43■□□□□ 0.86
GRN-213ENST00000588237 PZPP20742 1482 aa20.43■□□□□ 0.86
GRN-213ENST00000588237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.86
GRN-213ENST00000588237 TNRQ92752 1358 aa20.42■□□□□ 0.86
GRN-213ENST00000588237 ZC3H13Q5T200 1668 aaKnown RBP20.42■□□□□ 0.86
GRN-213ENST00000588237 CEP152O94986 1710 aa20.41■□□□□ 0.86
GRN-213ENST00000588237 A2ML1A8K2U0 1454 aa20.41■□□□□ 0.86
GRN-213ENST00000588237 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
GRN-213ENST00000588237 ABCC3O15438 1527 aa20.39■□□□□ 0.85
GRN-213ENST00000588237 MROH1Q8NDA8 1641 aa20.38■□□□□ 0.85
GRN-213ENST00000588237 KANK1Q14678 1352 aa20.35■□□□□ 0.85
GRN-213ENST00000588237 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
GRN-213ENST00000588237 TOM1O60784 492 aa20.34■□□□□ 0.85
GRN-213ENST00000588237 ITGAEP38570 1179 aa20.33■□□□□ 0.85
GRN-213ENST00000588237 POLR1AO95602 1720 aaPredicted RBP20.33■□□□□ 0.84
GRN-213ENST00000588237 PRDM15P57071 1507 aaPredicted RBP20.32■□□□□ 0.84
GRN-213ENST00000588237 ADGRL2O95490 1459 aa20.32■□□□□ 0.84
GRN-213ENST00000588237 PIP4K2BP78356 416 aa20.32■□□□□ 0.84
GRN-213ENST00000588237 ANKLE2Q86XL3 938 aa20.32■□□□□ 0.84
GRN-213ENST00000588237 THEMISQ8N1K5 641 aaPredicted RBP20.31■□□□□ 0.84
GRN-213ENST00000588237 DEPDC5O75140 1603 aa20.31■□□□□ 0.84
GRN-213ENST00000588237 NLRP1Q9C000 1473 aa20.3■□□□□ 0.84
GRN-213ENST00000588237 CPS1P31327 1500 aa20.29■□□□□ 0.84
GRN-213ENST00000588237 HSPA1LP34931 641 aa20.29■□□□□ 0.84
GRN-213ENST00000588237 ERVK-7P63135 1459 aa20.29■□□□□ 0.84
GRN-213ENST00000588237 UGGT1Q9NYU2 1555 aa20.29■□□□□ 0.84
GRN-213ENST00000588237 ANKRD50Q9ULJ7 1429 aa20.27■□□□□ 0.84
GRN-213ENST00000588237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.27■□□□□ 0.844e-11■■■■■ 30.2
GRN-213ENST00000588237 NEURL4Q96JN8 1562 aa20.26■□□□□ 0.83
GRN-213ENST00000588237 ARHGAP31Q2M1Z3 1444 aa20.23■□□□□ 0.83
GRN-213ENST00000588237 NPHP4O75161 1426 aaPredicted RBP20.2■□□□□ 0.82
GRN-213ENST00000588237 STAG3Q9UJ98 1225 aa20.2■□□□□ 0.82
GRN-213ENST00000588237 VWDEQ8N2E2 1590 aa20.2■□□□□ 0.82
GRN-213ENST00000588237 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
GRN-213ENST00000588237 LMTK2Q8IWU2 1503 aa20.19■□□□□ 0.82
GRN-213ENST00000588237 MED14O60244 1454 aa20.18■□□□□ 0.82
GRN-213ENST00000588237 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
GRN-213ENST00000588237 UBR1Q8IWV7 1749 aa20.18■□□□□ 0.82
GRN-213ENST00000588237 EFCAB6Q5THR3 1501 aa20.17■□□□□ 0.82
GRN-213ENST00000588237 IQGAP1P46940 1657 aa20.15■□□□□ 0.82
GRN-213ENST00000588237 PIK3C2BO00750 1634 aa20.14■□□□□ 0.81
GRN-213ENST00000588237 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
GRN-213ENST00000588237 UNC13BO14795 1591 aa20.13■□□□□ 0.81
GRN-213ENST00000588237 TET3O43151 1660 aa20.13■□□□□ 0.81
GRN-213ENST00000588237 RRBP1Q9P2E9 1410 aaKnown RBP20.12■□□□□ 0.81
GRN-213ENST00000588237 GCC2Q8IWJ2 1684 aa20.11■□□□□ 0.81
GRN-213ENST00000588237 IDI1Q13907 227 aa20.11■□□□□ 0.81
GRN-213ENST00000588237 EID1Q9Y6B2 187 aa20.11■□□□□ 0.81
GRN-213ENST00000588237 SYNMO15061 1565 aa20.1■□□□□ 0.81
GRN-213ENST00000588237 TXNDC2Q86VQ3 553 aa20.1■□□□□ 0.81
GRN-213ENST00000588237 STRCP1A6NGW2 1772 aa20.09■□□□□ 0.81
GRN-213ENST00000588237 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
GRN-213ENST00000588237 ALKQ9UM73 1620 aa20.09■□□□□ 0.81
GRN-213ENST00000588237 NUP155O75694 1391 aa20.08■□□□□ 0.81
GRN-213ENST00000588237 RPRD2Q5VT52 1461 aaKnown RBP20.08■□□□□ 0.81
GRN-213ENST00000588237 NOS1P29475 1434 aa20.08■□□□□ 0.8
GRN-213ENST00000588237 LRRC7Q96NW7 1537 aa20.07■□□□□ 0.8
GRN-213ENST00000588237 SCAF11Q99590 1463 aaKnown RBP20.07■□□□□ 0.8
GRN-213ENST00000588237 SLC52A1Q9NWF4 448 aa20.07■□□□□ 0.8
GRN-213ENST00000588237 IQGAP3Q86VI3 1631 aa20.06■□□□□ 0.8
GRN-213ENST00000588237 LTKP29376 864 aa20.06■□□□□ 0.8
GRN-213ENST00000588237 E9PCH4 1651 aa20.05■□□□□ 0.8
GRN-213ENST00000588237 SLIT1O75093 1534 aa20.05■□□□□ 0.8
GRN-213ENST00000588237 KDM5AP29375 1690 aaKnown RBP20.04■□□□□ 0.8
GRN-213ENST00000588237 CHGAP10645 457 aaKnown RBP20.04■□□□□ 0.8
GRN-213ENST00000588237 TMEM2Q9UHN6 1383 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms