RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 PRG4Q92954 1404 aaPredicted RBP21.82■■□□□ 1.08
RANBP3-209ENST00000587411 PARD3Q8TEW0 1356 aa21.82■■□□□ 1.08
RANBP3-209ENST00000587411 KDM5DQ9BY66 1539 aa21.82■■□□□ 1.08
RANBP3-209ENST00000587411 DDRGK1Q96HY6 314 aa21.81■■□□□ 1.08
RANBP3-209ENST00000587411 ZMYM4Q5VZL5 1548 aa21.81■■□□□ 1.08
RANBP3-209ENST00000587411 SHANK2Q9UPX8 1470 aa21.8■■□□□ 1.08
RANBP3-209ENST00000587411 NUP155O75694 1391 aa21.78■■□□□ 1.08
RANBP3-209ENST00000587411 LAS1LQ9Y4W2 734 aaKnown RBP21.78■■□□□ 1.08
RANBP3-209ENST00000587411 WASHC2CQ9Y4E1 1318 aa21.78■■□□□ 1.08
RANBP3-209ENST00000587411 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
RANBP3-209ENST00000587411 ZNF777Q9ULD5 760 aaPredicted RBP21.74■■□□□ 1.07
RANBP3-209ENST00000587411 IL27Q8NEV9 243 aa21.73■■□□□ 1.07
RANBP3-209ENST00000587411 PLEKHH2Q8IVE3 1493 aa21.73■■□□□ 1.07
RANBP3-209ENST00000587411 PTPRGP23470 1445 aa21.72■■□□□ 1.07
RANBP3-209ENST00000587411 BLMP54132 1417 aaPredicted RBP21.72■■□□□ 1.07
RANBP3-209ENST00000587411 C9orf84Q5VXU9 1444 aa21.72■■□□□ 1.07
RANBP3-209ENST00000587411 DCAF11Q8TEB1 546 aa21.71■■□□□ 1.07
RANBP3-209ENST00000587411 KDM2AQ9Y2K7 1162 aa21.71■■□□□ 1.07
RANBP3-209ENST00000587411 SALL2Q9Y467 1007 aaPredicted RBP21.7■■□□□ 1.06
RANBP3-209ENST00000587411 MRC2Q9UBG0 1479 aa21.68■■□□□ 1.06
RANBP3-209ENST00000587411 ANO8Q9HCE9 1232 aaPredicted RBP21.68■■□□□ 1.06
RANBP3-209ENST00000587411 PER1O15534 1290 aaPredicted RBP21.68■■□□□ 1.06
RANBP3-209ENST00000587411 CDCA7LQ96GN5 454 aa21.68■■□□□ 1.06
RANBP3-209ENST00000587411 GRIN2AQ12879 1464 aa21.67■■□□□ 1.06
RANBP3-209ENST00000587411 IFT140Q96RY7 1462 aa21.67■■□□□ 1.06
RANBP3-209ENST00000587411 CDC42BPAQ5VT25 1732 aa21.66■■□□□ 1.06
RANBP3-209ENST00000587411 CRBNQ96SW2 442 aa21.66■■□□□ 1.06
RANBP3-209ENST00000587411 TRPM1Q7Z4N2 1603 aa21.66■■□□□ 1.06
RANBP3-209ENST00000587411 PRAG1Q86YV5 1406 aa21.66■■□□□ 1.06
RANBP3-209ENST00000587411 PLB1Q6P1J6 1458 aa21.65■■□□□ 1.06
RANBP3-209ENST00000587411 GPRASP1Q5JY77 1395 aa21.64■■□□□ 1.05
RANBP3-209ENST00000587411 COL17A1Q9UMD9 1497 aaPredicted RBP21.64■■□□□ 1.05
RANBP3-209ENST00000587411 TSPY4P0CV99 314 aa21.63■■□□□ 1.05
RANBP3-209ENST00000587411 TSPY10P0CW01 314 aa21.63■■□□□ 1.05
RANBP3-209ENST00000587411 LAMC1P11047 1609 aa21.62■■□□□ 1.05
RANBP3-209ENST00000587411 PLIN1O60240 522 aa21.62■■□□□ 1.05
RANBP3-209ENST00000587411 GSE1Q14687 1217 aa21.61■■□□□ 1.05
RANBP3-209ENST00000587411 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
RANBP3-209ENST00000587411 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
RANBP3-209ENST00000587411 ABCC10Q5T3U5 1492 aa21.61■■□□□ 1.05
RANBP3-209ENST00000587411 KDM2BQ8NHM5 1336 aa21.6■■□□□ 1.05
RANBP3-209ENST00000587411 CENPQQ7L2Z9 268 aaPredicted RBP21.6■■□□□ 1.05
RANBP3-209ENST00000587411 ARHGEF5Q12774 1597 aa21.58■■□□□ 1.05
RANBP3-209ENST00000587411 DAXXQ9UER7 740 aaPredicted RBP21.58■■□□□ 1.04
RANBP3-209ENST00000587411 NFKBIBQ15653 356 aa21.57■■□□□ 1.04
RANBP3-209ENST00000587411 RTN4Q9NQC3 1192 aaKnown RBP21.57■■□□□ 1.04
RANBP3-209ENST00000587411 CCDC144AA2RUR9 1427 aa21.57■■□□□ 1.04
RANBP3-209ENST00000587411 PRDM15P57071 1507 aaPredicted RBP21.57■■□□□ 1.04
RANBP3-209ENST00000587411 FAM135AQ9P2D6 1515 aa21.57■■□□□ 1.04
RANBP3-209ENST00000587411 PLEKHD1A6NEE1 506 aa21.56■■□□□ 1.04
RANBP3-209ENST00000587411 CARMIL2Q6F5E8 1435 aa21.56■■□□□ 1.04
RANBP3-209ENST00000587411 MAGI1Q96QZ7 1491 aaPredicted RBP21.55■■□□□ 1.04
RANBP3-209ENST00000587411 CC2D1BQ5T0F9 858 aaKnown RBP21.54■■□□□ 1.04
RANBP3-209ENST00000587411 FAM161AQ3B820 660 aa21.54■■□□□ 1.04
RANBP3-209ENST00000587411 TESK2Q96S53 571 aa21.53■■□□□ 1.04
RANBP3-209ENST00000587411 ERBINQ96RT1 1412 aa21.53■■□□□ 1.04
RANBP3-209ENST00000587411 DISP3Q9P2K9 1392 aa21.52■■□□□ 1.04
RANBP3-209ENST00000587411 EIF2AK4Q9P2K8 1649 aaKnown RBP21.52■■□□□ 1.04
RANBP3-209ENST00000587411 PANK3Q9H999 370 aa21.52■■□□□ 1.03
RANBP3-209ENST00000587411 NBPF1Q3BBV0 1214 aa21.51■■□□□ 1.03
RANBP3-209ENST00000587411 SKAP1Q86WV1 359 aa21.51■■□□□ 1.03
RANBP3-209ENST00000587411 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.51■■□□□ 1.03
RANBP3-209ENST00000587411 TMF1P82094 1093 aa21.5■■□□□ 1.03
RANBP3-209ENST00000587411 C20orf194Q5TEA3 1177 aa21.5■■□□□ 1.03
RANBP3-209ENST00000587411 A2MP01023 1474 aa21.49■■□□□ 1.03
RANBP3-209ENST00000587411 ABCA8O94911 1581 aa21.49■■□□□ 1.03
RANBP3-209ENST00000587411 NUP160Q12769 1436 aa21.49■■□□□ 1.03
RANBP3-209ENST00000587411 CCDC141Q6ZP82 1450 aa21.48■■□□□ 1.03
RANBP3-209ENST00000587411 C8orf34Q49A92 452 aa21.47■■□□□ 1.03
RANBP3-209ENST00000587411 SYNJ2O15056 1496 aa21.47■■□□□ 1.03
RANBP3-209ENST00000587411 BRPF3Q9ULD4 1205 aa21.46■■□□□ 1.03
RANBP3-209ENST00000587411 RSPH4AQ5TD94 716 aa21.46■■□□□ 1.03
RANBP3-209ENST00000587411 DUSP27Q5VZP5 1158 aa21.46■■□□□ 1.03
RANBP3-209ENST00000587411 FRAT1Q92837 279 aaPredicted RBP21.45■■□□□ 1.02
RANBP3-209ENST00000587411 ADAMTS8Q9UP79 889 aa21.45■■□□□ 1.02
RANBP3-209ENST00000587411 ATP10BO94823 1461 aa21.45■■□□□ 1.02
RANBP3-209ENST00000587411 HNRNPMP52272 730 aaKnown RBP eCLIP21.44■■□□□ 1.02
RANBP3-209ENST00000587411 CLASP1Q7Z460 1538 aa21.44■■□□□ 1.02
RANBP3-209ENST00000587411 UNC13BO14795 1591 aa21.44■■□□□ 1.02
RANBP3-209ENST00000587411 PLA2R1Q13018 1463 aa21.44■■□□□ 1.02
RANBP3-209ENST00000587411 ZNF521Q96K83 1311 aa21.43■■□□□ 1.02
RANBP3-209ENST00000587411 SLC4A3P48751 1232 aa21.43■■□□□ 1.02
RANBP3-209ENST00000587411 RGL3Q3MIN7 710 aa21.43■■□□□ 1.02
RANBP3-209ENST00000587411 EIF3AQ14152 1382 aaKnown RBP21.43■■□□□ 1.02
RANBP3-209ENST00000587411 WDR43Q15061 677 aaKnown RBP eCLIP21.42■■□□□ 1.02
RANBP3-209ENST00000587411 PLEKHH1Q9ULM0 1364 aa21.42■■□□□ 1.02
RANBP3-209ENST00000587411 GOLGA2Q08379 1002 aa21.42■■□□□ 1.02
RANBP3-209ENST00000587411 CHMP7Q8WUX9 453 aaPredicted RBP21.41■■□□□ 1.02
RANBP3-209ENST00000587411 JPH4Q96JJ6 628 aa21.4■■□□□ 1.02
RANBP3-209ENST00000587411 PPP2R1AP30153 589 aa21.38■■□□□ 1.01
RANBP3-209ENST00000587411 RNF17Q9BXT8 1623 aaKnown RBP21.38■■□□□ 1.01
RANBP3-209ENST00000587411 SAMD9LQ8IVG5 1584 aa21.38■■□□□ 1.01
RANBP3-209ENST00000587411 ATP10AO60312 1499 aa21.38■■□□□ 1.01
RANBP3-209ENST00000587411 MAST1Q9Y2H9 1570 aa21.37■■□□□ 1.01
RANBP3-209ENST00000587411 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
RANBP3-209ENST00000587411 MYO5CQ9NQX4 1742 aa21.37■■□□□ 1.01
RANBP3-209ENST00000587411 WDR7Q9Y4E6 1490 aa21.37■■□□□ 1.01
RANBP3-209ENST00000587411 IQGAP3Q86VI3 1631 aa21.36■■□□□ 1.01
RANBP3-209ENST00000587411 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
RANBP3-209ENST00000587411 PREX2Q70Z35 1606 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms