RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 THEMISQ8N1K5 641 aaPredicted RBP21.34■■□□□ 1.01
SMARCA4-211ENST00000586921 CDC42BPAQ5VT25 1732 aa21.33■■□□□ 1.01
SMARCA4-211ENST00000586921 ZNF777Q9ULD5 760 aaPredicted RBP21.33■■□□□ 1.01
SMARCA4-211ENST00000586921 INO80Q9ULG1 1556 aaPredicted RBP21.32■■□□□ 1
SMARCA4-211ENST00000586921 FBXO31Q5XUX0 539 aaPredicted RBP21.32■■□□□ 1
SMARCA4-211ENST00000586921 FAM135AQ9P2D6 1515 aa21.31■■□□□ 1
SMARCA4-211ENST00000586921 UPF1Q92900 1129 aaKnown RBP eCLIP21.31■■□□□ 1
SMARCA4-211ENST00000586921 LRRIQ1Q96JM4 1722 aa21.31■■□□□ 1
SMARCA4-211ENST00000586921 UGGT1Q9NYU2 1555 aa21.3■■□□□ 1
SMARCA4-211ENST00000586921 HNRNPMP52272 730 aaKnown RBP eCLIP21.29■■□□□ 1
SMARCA4-211ENST00000586921 PZPP20742 1482 aa21.27■■□□□ 1
SMARCA4-211ENST00000586921 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
SMARCA4-211ENST00000586921 ADGBQ8N7X0 1667 aa21.26■□□□□ 0.99
SMARCA4-211ENST00000586921 EEA1Q15075 1411 aa21.26■□□□□ 0.99
SMARCA4-211ENST00000586921 FAM135BQ49AJ0 1406 aa21.26■□□□□ 0.99
SMARCA4-211ENST00000586921 ARHGAP35Q9NRY4 1499 aa21.23■□□□□ 0.99
SMARCA4-211ENST00000586921 MIA2Q96PC5 1412 aa21.21■□□□□ 0.99
SMARCA4-211ENST00000586921 KIAA1107Q9UPP5 1409 aa21.21■□□□□ 0.99
SMARCA4-211ENST00000586921 KDM5DQ9BY66 1539 aa21.2■□□□□ 0.98
SMARCA4-211ENST00000586921 PLEKHH2Q8IVE3 1493 aa21.2■□□□□ 0.98
SMARCA4-211ENST00000586921 XIRP1Q702N8 1843 aaKnown RBP21.19■□□□□ 0.98
SMARCA4-211ENST00000586921 CCDC18Q5T9S5 1454 aa21.19■□□□□ 0.98
SMARCA4-211ENST00000586921 ZC3H13Q5T200 1668 aaKnown RBP21.18■□□□□ 0.98
SMARCA4-211ENST00000586921 ROBO1Q9Y6N7 1651 aa21.17■□□□□ 0.98
SMARCA4-211ENST00000586921 GPATCH8Q9UKJ3 1502 aaKnown RBP21.16■□□□□ 0.98
SMARCA4-211ENST00000586921 TRIM52Q96A61 297 aa21.16■□□□□ 0.98
SMARCA4-211ENST00000586921 WASHC2CQ9Y4E1 1318 aa21.13■□□□□ 0.97
SMARCA4-211ENST00000586921 DHX29Q7Z478 1369 aaKnown RBP21.11■□□□□ 0.97
SMARCA4-211ENST00000586921 KIF3BO15066 747 aa21.11■□□□□ 0.97
SMARCA4-211ENST00000586921 CFDP1Q9UEE9 299 aaPredicted RBP21.11■□□□□ 0.97
SMARCA4-211ENST00000586921 JCADQ9P266 1359 aa21.1■□□□□ 0.97
SMARCA4-211ENST00000586921 SCAF11Q99590 1463 aaKnown RBP21.09■□□□□ 0.97
SMARCA4-211ENST00000586921 ZNF772Q68DY9 489 aaPredicted RBP21.09■□□□□ 0.97
SMARCA4-211ENST00000586921 UBTFP17480 764 aaKnown RBP21.08■□□□□ 0.97
SMARCA4-211ENST00000586921 LRRC9Q6ZRR7 1453 aa21.07■□□□□ 0.96
SMARCA4-211ENST00000586921 CASKIN1Q8WXD9 1431 aa21.06■□□□□ 0.96
SMARCA4-211ENST00000586921 TMEM94Q12767 1356 aa21.06■□□□□ 0.96
SMARCA4-211ENST00000586921 PHLPP1O60346 1717 aa21.06■□□□□ 0.96
SMARCA4-211ENST00000586921 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
SMARCA4-211ENST00000586921 RTEL1-TNFRSF6BF6WH68 1400 aa21.04■□□□□ 0.96
SMARCA4-211ENST00000586921 MEX3CQ5U5Q3 659 aaKnown RBP21.04■□□□□ 0.96
SMARCA4-211ENST00000586921 CCNB3Q8WWL7 1395 aa21.02■□□□□ 0.96
SMARCA4-211ENST00000586921 LRP6O75581 1613 aa21.01■□□□□ 0.95
SMARCA4-211ENST00000586921 RXRBP28702 533 aa21.01■□□□□ 0.95
SMARCA4-211ENST00000586921 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
SMARCA4-211ENST00000586921 UBR1Q8IWV7 1749 aa21■□□□□ 0.95
SMARCA4-211ENST00000586921 CDK12Q9NYV4 1490 aaPredicted RBP21■□□□□ 0.95
SMARCA4-211ENST00000586921 MAP3K1Q13233 1512 aa20.99■□□□□ 0.95
SMARCA4-211ENST00000586921 LTKP29376 864 aa20.99■□□□□ 0.95
SMARCA4-211ENST00000586921 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
SMARCA4-211ENST00000586921 SPATA31A6Q5VVP1 1343 aa20.98■□□□□ 0.95
SMARCA4-211ENST00000586921 ERVK-7P63135 1459 aa20.97■□□□□ 0.95
SMARCA4-211ENST00000586921 MBD5Q9P267 1494 aa20.97■□□□□ 0.95
SMARCA4-211ENST00000586921 ZNF644Q9H582 1327 aaPredicted RBP20.97■□□□□ 0.95
SMARCA4-211ENST00000586921 ARHGAP23Q9P227 1491 aa20.95■□□□□ 0.94
SMARCA4-211ENST00000586921 SLIT1O75093 1534 aa20.95■□□□□ 0.94
SMARCA4-211ENST00000586921 COL16A1Q07092 1604 aaPredicted RBP20.95■□□□□ 0.94
SMARCA4-211ENST00000586921 NCOA2Q15596 1464 aa20.94■□□□□ 0.94
SMARCA4-211ENST00000586921 PROSER2Q86WR7 435 aaPredicted RBP20.94■□□□□ 0.94
SMARCA4-211ENST00000586921 RBM33Q96EV2 1170 aaKnown RBP20.94■□□□□ 0.94
SMARCA4-211ENST00000586921 EID1Q9Y6B2 187 aa20.94■□□□□ 0.94
SMARCA4-211ENST00000586921 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
SMARCA4-211ENST00000586921 SLAIN2Q9P270 581 aa20.93■□□□□ 0.94
SMARCA4-211ENST00000586921 MSH6P52701 1360 aa20.92■□□□□ 0.94
SMARCA4-211ENST00000586921 FGD6Q6ZV73 1430 aa20.92■□□□□ 0.94
SMARCA4-211ENST00000586921 ABCC3O15438 1527 aa20.91■□□□□ 0.94
SMARCA4-211ENST00000586921 KCNA6P17658 529 aa20.91■□□□□ 0.94
SMARCA4-211ENST00000586921 TIAM1Q13009 1591 aa20.89■□□□□ 0.94
SMARCA4-211ENST00000586921 PRDM15P57071 1507 aaPredicted RBP20.89■□□□□ 0.94
SMARCA4-211ENST00000586921 NKTRP30414 1462 aaKnown RBP20.87■□□□□ 0.93
SMARCA4-211ENST00000586921 FOXD1Q16676 465 aa20.86■□□□□ 0.93
SMARCA4-211ENST00000586921 ZRANB1Q9UGI0 708 aa20.86■□□□□ 0.93
SMARCA4-211ENST00000586921 CCDC141Q6ZP82 1450 aa20.86■□□□□ 0.93
SMARCA4-211ENST00000586921 SHPRHQ149N8 1683 aa20.85■□□□□ 0.93
SMARCA4-211ENST00000586921 RGS12O14924 1447 aa20.84■□□□□ 0.93
SMARCA4-211ENST00000586921 CFAP65Q6ZU64 1925 aaKnown RBP20.84■□□□□ 0.93
SMARCA4-211ENST00000586921 MTUS2Q5JR59 1369 aa20.83■□□□□ 0.92
SMARCA4-211ENST00000586921 TMEM2Q9UHN6 1383 aa20.82■□□□□ 0.92
SMARCA4-211ENST00000586921 SETBP1Q9Y6X0 1596 aa20.81■□□□□ 0.92
SMARCA4-211ENST00000586921 NUTM2BA6NNL0 878 aaPredicted RBP20.81■□□□□ 0.92
SMARCA4-211ENST00000586921 NUTM2EB1AL46 878 aaPredicted RBP20.81■□□□□ 0.92
SMARCA4-211ENST00000586921 NUTM2DQ5VT03 806 aaPredicted RBP20.81■□□□□ 0.92
SMARCA4-211ENST00000586921 NUTM2AQ8IVF1 878 aaPredicted RBP20.81■□□□□ 0.92
SMARCA4-211ENST00000586921 NWD1Q149M9 1564 aa20.8■□□□□ 0.92
SMARCA4-211ENST00000586921 AFF2P51816 1311 aa20.8■□□□□ 0.92
SMARCA4-211ENST00000586921 SLC26A8Q96RN1 970 aa20.8■□□□□ 0.92
SMARCA4-211ENST00000586921 CAMSAP2Q08AD1 1489 aa20.78■□□□□ 0.92
SMARCA4-211ENST00000586921 KDM5AP29375 1690 aaKnown RBP20.77■□□□□ 0.92
SMARCA4-211ENST00000586921 CEP152O94986 1710 aa20.77■□□□□ 0.92
SMARCA4-211ENST00000586921 AHDC1Q5TGY3 1603 aaPredicted RBP20.77■□□□□ 0.92
SMARCA4-211ENST00000586921 ATAD2Q6PL18 1390 aa20.76■□□□□ 0.91
SMARCA4-211ENST00000586921 TET3O43151 1660 aa20.76■□□□□ 0.91
SMARCA4-211ENST00000586921 PIK3C2BO00750 1634 aa20.75■□□□□ 0.91
SMARCA4-211ENST00000586921 RBM6P78332 1123 aaKnown RBP20.75■□□□□ 0.91
SMARCA4-211ENST00000586921 RSPH4AQ5TD94 716 aa20.75■□□□□ 0.91
SMARCA4-211ENST00000586921 STAG3Q9UJ98 1225 aa20.75■□□□□ 0.91
SMARCA4-211ENST00000586921 MROH1Q8NDA8 1641 aa20.73■□□□□ 0.91
SMARCA4-211ENST00000586921 EIF2AK4Q9P2K8 1649 aaKnown RBP20.71■□□□□ 0.91
SMARCA4-211ENST00000586921 QTRT2Q9H974 415 aaKnown RBP20.71■□□□□ 0.91
SMARCA4-211ENST00000586921 EFCAB6Q5THR3 1501 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms