RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 HFM1A2PYH4 1435 aa28.9■■■□□ 2.22
DDX39A-204ENST00000586558 CNTLNQ9NXG0 1405 aa28.9■■■□□ 2.22
DDX39A-204ENST00000586558 FER1L4A9Z1Z3 1794 aa28.89■■■□□ 2.22
DDX39A-204ENST00000586558 NAIPQ13075 1403 aa28.88■■■□□ 2.21
DDX39A-204ENST00000586558 ESF1Q9H501 851 aaKnown RBP28.88■■■□□ 2.21
DDX39A-204ENST00000586558 DEPDC5O75140 1603 aa28.86■■■□□ 2.21
DDX39A-204ENST00000586558 GCC2Q8IWJ2 1684 aa28.86■■■□□ 2.21
DDX39A-204ENST00000586558 PRDM15P57071 1507 aaPredicted RBP28.85■■■□□ 2.21
DDX39A-204ENST00000586558 MROH1Q8NDA8 1641 aa28.84■■■□□ 2.21
DDX39A-204ENST00000586558 KDM5DQ9BY66 1539 aa28.84■■■□□ 2.21
DDX39A-204ENST00000586558 RIMS1Q86UR5 1692 aaKnown RBP28.83■■■□□ 2.21
DDX39A-204ENST00000586558 PTPRMP28827 1452 aa28.83■■■□□ 2.21
DDX39A-204ENST00000586558 KANK1Q14678 1352 aa28.8■■■□□ 2.2
DDX39A-204ENST00000586558 WASHC2CQ9Y4E1 1318 aa28.79■■■□□ 2.2
DDX39A-204ENST00000586558 MROH2AA6NES4 1674 aa28.79■■■□□ 2.2
DDX39A-204ENST00000586558 ZC3H13Q5T200 1668 aaKnown RBP28.79■■■□□ 2.2
DDX39A-204ENST00000586558 UNC13BO14795 1591 aa28.77■■■□□ 2.2
DDX39A-204ENST00000586558 ABCC3O15438 1527 aa28.77■■■□□ 2.2
DDX39A-204ENST00000586558 CLTCQ00610 1675 aaKnown RBP28.76■■■□□ 2.19
DDX39A-204ENST00000586558 VWDEQ8N2E2 1590 aa28.75■■■□□ 2.19
DDX39A-204ENST00000586558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.74■■■□□ 2.198e-8■■■□□ 18.7
DDX39A-204ENST00000586558 ZMYM3Q14202 1370 aa28.72■■■□□ 2.19
DDX39A-204ENST00000586558 LMTK2Q8IWU2 1503 aa28.71■■■□□ 2.19
DDX39A-204ENST00000586558 SETD5Q9C0A6 1442 aa28.7■■■□□ 2.19
DDX39A-204ENST00000586558 TRIM26Q12899 539 aaPredicted RBP28.7■■■□□ 2.18
DDX39A-204ENST00000586558 ACIN1Q9UKV3 1341 aaKnown RBP28.69■■■□□ 2.18
DDX39A-204ENST00000586558 C3P01024 1663 aa28.68■■■□□ 2.18
DDX39A-204ENST00000586558 CEP152O94986 1710 aa28.66■■■□□ 2.18
DDX39A-204ENST00000586558 NUP155O75694 1391 aa28.66■■■□□ 2.18
DDX39A-204ENST00000586558 PZPP20742 1482 aa28.66■■■□□ 2.18
DDX39A-204ENST00000586558 CAMSAP1Q5T5Y3 1602 aa28.65■■■□□ 2.18
DDX39A-204ENST00000586558 IQGAP3Q86VI3 1631 aa28.65■■■□□ 2.18
DDX39A-204ENST00000586558 NPATQ14207 1427 aa28.64■■■□□ 2.18
DDX39A-204ENST00000586558 ARHGAP31Q2M1Z3 1444 aa28.64■■■□□ 2.18
DDX39A-204ENST00000586558 CEBPAP49715 358 aaPredicted RBP28.63■■■□□ 2.17
DDX39A-204ENST00000586558 EFCAB6Q5THR3 1501 aa28.61■■■□□ 2.17
DDX39A-204ENST00000586558 TET3O43151 1660 aa28.6■■■□□ 2.17
DDX39A-204ENST00000586558 PLPPR3Q6T4P5 718 aa28.59■■■□□ 2.17
DDX39A-204ENST00000586558 RAB3GAP2Q9H2M9 1393 aa28.59■■■□□ 2.17
DDX39A-204ENST00000586558 HRCP23327 699 aa28.56■■■□□ 2.16
DDX39A-204ENST00000586558 RPRD2Q5VT52 1461 aaKnown RBP28.56■■■□□ 2.16
DDX39A-204ENST00000586558 TRIM52Q96A61 297 aa28.56■■■□□ 2.16
DDX39A-204ENST00000586558 ERVK-7P63135 1459 aa28.53■■■□□ 2.16
DDX39A-204ENST00000586558 SPATA31D1Q6ZQQ2 1576 aa28.52■■■□□ 2.16
DDX39A-204ENST00000586558 FBXO31Q5XUX0 539 aaPredicted RBP28.51■■■□□ 2.15
DDX39A-204ENST00000586558 TNRQ92752 1358 aa28.5■■■□□ 2.15
DDX39A-204ENST00000586558 PREX1Q8TCU6 1659 aa28.48■■■□□ 2.15
DDX39A-204ENST00000586558 SETD1BQ9UPS6 1966 aaKnown RBP28.48■■■□□ 2.15
DDX39A-204ENST00000586558 UHRF1BP1Q6BDS2 1440 aa28.47■■■□□ 2.15
DDX39A-204ENST00000586558 E9PCH4 1651 aa28.45■■■□□ 2.15
DDX39A-204ENST00000586558 SLC4A1APQ9BWU0 796 aaKnown RBP28.45■■■□□ 2.14
DDX39A-204ENST00000586558 NOS1P29475 1434 aa28.44■■■□□ 2.14
DDX39A-204ENST00000586558 NLRP1Q9C000 1473 aa28.42■■■□□ 2.14
DDX39A-204ENST00000586558 MYO3AQ8NEV4 1616 aa28.42■■■□□ 2.14
DDX39A-204ENST00000586558 LMTK3Q96Q04 1460 aa28.4■■■□□ 2.14
DDX39A-204ENST00000586558 PKD2Q13563 968 aa28.39■■■□□ 2.14
DDX39A-204ENST00000586558 MPHOSPH9Q99550 1183 aa28.39■■■□□ 2.14
DDX39A-204ENST00000586558 A2ML1A8K2U0 1454 aa28.37■■■□□ 2.13
DDX39A-204ENST00000586558 ZNF142P52746 1687 aaPredicted RBP28.37■■■□□ 2.13
DDX39A-204ENST00000586558 SYNMO15061 1565 aa28.37■■■□□ 2.13
DDX39A-204ENST00000586558 CEP170BQ9Y4F5 1589 aaPredicted RBP28.36■■■□□ 2.13
DDX39A-204ENST00000586558 PTPRTO14522 1441 aa28.35■■■□□ 2.13
DDX39A-204ENST00000586558 SLC52A1Q9NWF4 448 aa28.34■■■□□ 2.13
DDX39A-204ENST00000586558 CFAP65Q6ZU64 1925 aaKnown RBP28.33■■■□□ 2.13
DDX39A-204ENST00000586558 SPHKAPQ2M3C7 1700 aa28.31■■■□□ 2.12
DDX39A-204ENST00000586558 TRPM2O94759 1503 aa28.29■■■□□ 2.12
DDX39A-204ENST00000586558 PCGF6Q9BYE7 350 aa28.28■■■□□ 2.12
DDX39A-204ENST00000586558 PIK3C2BO00750 1634 aa28.28■■■□□ 2.12
DDX39A-204ENST00000586558 UGGT1Q9NYU2 1555 aa28.27■■■□□ 2.12
DDX39A-204ENST00000586558 IDI1Q13907 227 aa28.26■■■□□ 2.11
DDX39A-204ENST00000586558 PLA2R1Q13018 1463 aa28.26■■■□□ 2.11
DDX39A-204ENST00000586558 KDM5AP29375 1690 aaKnown RBP28.24■■■□□ 2.11
DDX39A-204ENST00000586558 THEMISQ8N1K5 641 aaPredicted RBP28.23■■■□□ 2.11
DDX39A-204ENST00000586558 FOXD1Q16676 465 aa28.22■■■□□ 2.11
DDX39A-204ENST00000586558 ADGRB3O60242 1522 aa28.22■■■□□ 2.11
DDX39A-204ENST00000586558 HSPA2P54652 639 aa28.21■■■□□ 2.11
DDX39A-204ENST00000586558 UBR1Q8IWV7 1749 aa28.2■■■□□ 2.1
DDX39A-204ENST00000586558 STAG3Q9UJ98 1225 aa28.19■■■□□ 2.1
DDX39A-204ENST00000586558 CLTCL1P53675 1640 aa28.17■■■□□ 2.1
DDX39A-204ENST00000586558 CCDC144AA2RUR9 1427 aa28.17■■■□□ 2.1
DDX39A-204ENST00000586558 TMEM131LA2VDJ0 1609 aa28.14■■■□□ 2.1
DDX39A-204ENST00000586558 ANKRD30BQ9BXX2 1392 aa28.13■■■□□ 2.09
DDX39A-204ENST00000586558 SLIT1O75093 1534 aa28.12■■■□□ 2.09
DDX39A-204ENST00000586558 ARHGAP23Q9P227 1491 aa28.11■■■□□ 2.09
DDX39A-204ENST00000586558 TMEM2Q9UHN6 1383 aa28.11■■■□□ 2.09
DDX39A-204ENST00000586558 CHGAP10645 457 aaKnown RBP28.09■■■□□ 2.09
DDX39A-204ENST00000586558 DHX57Q6P158 1386 aaKnown RBP28.09■■■□□ 2.09
DDX39A-204ENST00000586558 ANKLE2Q86XL3 938 aa28.07■■■□□ 2.08
DDX39A-204ENST00000586558 KIF1BO60333 1816 aa28.05■■■□□ 2.08
DDX39A-204ENST00000586558 EID1Q9Y6B2 187 aa28.04■■■□□ 2.08
DDX39A-204ENST00000586558 NEURL4Q96JN8 1562 aa28.03■■■□□ 2.08
DDX39A-204ENST00000586558 SCAF11Q99590 1463 aaKnown RBP28.03■■■□□ 2.08
DDX39A-204ENST00000586558 STRCQ7RTU9 1775 aa28.03■■■□□ 2.08
DDX39A-204ENST00000586558 ZFYVE9O95405 1425 aa28.02■■■□□ 2.08
DDX39A-204ENST00000586558 HDGFP51858 240 aaKnown RBP28.02■■■□□ 2.08
DDX39A-204ENST00000586558 DMRT2Q9Y5R5 561 aa28.02■■■□□ 2.08
DDX39A-204ENST00000586558 POLR1AO95602 1720 aaPredicted RBP28.01■■■□□ 2.07
DDX39A-204ENST00000586558 MYO5BQ9ULV0 1848 aa28.01■■■□□ 2.07
DDX39A-204ENST00000586558 SPATA31E1Q6ZUB1 1445 aa28.01■■■□□ 2.07
DDX39A-204ENST00000586558 RIMS2Q9UQ26 1411 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms