RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 ANKRD30AQ9BXX3 1397 aa33.3■■■□□ 2.92
R3HDM4-202ENST00000586080 UHRF1BP1Q6BDS2 1440 aa33.28■■■□□ 2.92
R3HDM4-202ENST00000586080 WASHC2CQ9Y4E1 1318 aa33.28■■■□□ 2.92
R3HDM4-202ENST00000586080 KDM5DQ9BY66 1539 aa33.26■■■□□ 2.91
R3HDM4-202ENST00000586080 PREX1Q8TCU6 1659 aa33.25■■■□□ 2.91
R3HDM4-202ENST00000586080 EIF2AK4Q9P2K8 1649 aaKnown RBP33.24■■■□□ 2.91
R3HDM4-202ENST00000586080 ERBINQ96RT1 1412 aa33.23■■■□□ 2.91
R3HDM4-202ENST00000586080 NPATQ14207 1427 aa33.21■■■□□ 2.91
R3HDM4-202ENST00000586080 FAM135AQ9P2D6 1515 aa33.21■■■□□ 2.91
R3HDM4-202ENST00000586080 RNF17Q9BXT8 1623 aaKnown RBP33.2■■■□□ 2.91
R3HDM4-202ENST00000586080 NCOA1Q15788 1441 aa33.2■■■□□ 2.91
R3HDM4-202ENST00000586080 PTPRKQ15262 1439 aa33.19■■■□□ 2.9
R3HDM4-202ENST00000586080 ADGRL2O95490 1459 aa33.18■■■□□ 2.9
R3HDM4-202ENST00000586080 ITGAEP38570 1179 aa33.18■■■□□ 2.9
R3HDM4-202ENST00000586080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.13■■■□□ 2.89
R3HDM4-202ENST00000586080 MROH1Q8NDA8 1641 aa33.12■■■□□ 2.89
R3HDM4-202ENST00000586080 SETD1BQ9UPS6 1966 aaKnown RBP33.12■■■□□ 2.89
R3HDM4-202ENST00000586080 ABCC3O15438 1527 aa33.12■■■□□ 2.89
R3HDM4-202ENST00000586080 PZPP20742 1482 aa33.11■■■□□ 2.89
R3HDM4-202ENST00000586080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.1■■■□□ 2.891e-6■■□□□ 14.3
R3HDM4-202ENST00000586080 FBXO31Q5XUX0 539 aaPredicted RBP33.09■■■□□ 2.89
R3HDM4-202ENST00000586080 PRDM15P57071 1507 aaPredicted RBP33.07■■■□□ 2.88
R3HDM4-202ENST00000586080 RRBP1Q9P2E9 1410 aaKnown RBP33.06■■■□□ 2.88
R3HDM4-202ENST00000586080 ZC3H13Q5T200 1668 aaKnown RBP33.06■■■□□ 2.88
R3HDM4-202ENST00000586080 ANKRD50Q9ULJ7 1429 aa33.05■■■□□ 2.88
R3HDM4-202ENST00000586080 KANK1Q14678 1352 aa33.05■■■□□ 2.88
R3HDM4-202ENST00000586080 TNRQ92752 1358 aa33.05■■■□□ 2.88
R3HDM4-202ENST00000586080 MYO3AQ8NEV4 1616 aa33.03■■■□□ 2.88
R3HDM4-202ENST00000586080 ROCK1Q13464 1354 aa33.02■■■□□ 2.88
R3HDM4-202ENST00000586080 CEP152O94986 1710 aa33■■■□□ 2.87
R3HDM4-202ENST00000586080 DEPDC5O75140 1603 aa32.99■■■□□ 2.87
R3HDM4-202ENST00000586080 CEP170BQ9Y4F5 1589 aaPredicted RBP32.97■■■□□ 2.87
R3HDM4-202ENST00000586080 CAMSAP1Q5T5Y3 1602 aa32.97■■■□□ 2.87
R3HDM4-202ENST00000586080 ZNF142P52746 1687 aaPredicted RBP32.93■■■□□ 2.86
R3HDM4-202ENST00000586080 A2ML1A8K2U0 1454 aa32.93■■■□□ 2.86
R3HDM4-202ENST00000586080 ERVK-7P63135 1459 aa32.93■■■□□ 2.86
R3HDM4-202ENST00000586080 SPATA31D1Q6ZQQ2 1576 aa32.88■■■□□ 2.85
R3HDM4-202ENST00000586080 ARHGAP31Q2M1Z3 1444 aa32.88■■■□□ 2.85
R3HDM4-202ENST00000586080 VWDEQ8N2E2 1590 aa32.87■■■□□ 2.85
R3HDM4-202ENST00000586080 DMRT2Q9Y5R5 561 aa32.87■■■□□ 2.85
R3HDM4-202ENST00000586080 LMTK2Q8IWU2 1503 aa32.87■■■□□ 2.85
R3HDM4-202ENST00000586080 NLRP1Q9C000 1473 aa32.86■■■□□ 2.85
R3HDM4-202ENST00000586080 STRCQ7RTU9 1775 aa32.85■■■□□ 2.85
R3HDM4-202ENST00000586080 NCKAP5LQ9HCH0 1330 aa32.82■■■□□ 2.84
R3HDM4-202ENST00000586080 PLA2R1Q13018 1463 aa32.8■■■□□ 2.84
R3HDM4-202ENST00000586080 UNC13BO14795 1591 aa32.79■■■□□ 2.84
R3HDM4-202ENST00000586080 EFCAB6Q5THR3 1501 aa32.79■■■□□ 2.84
R3HDM4-202ENST00000586080 UGGT1Q9NYU2 1555 aa32.78■■■□□ 2.84
R3HDM4-202ENST00000586080 PTPRTO14522 1441 aa32.76■■■□□ 2.83
R3HDM4-202ENST00000586080 PKD2Q13563 968 aa32.75■■■□□ 2.83
R3HDM4-202ENST00000586080 THEMISQ8N1K5 641 aaPredicted RBP32.75■■■□□ 2.83
R3HDM4-202ENST00000586080 NUP155O75694 1391 aa32.74■■■□□ 2.83
R3HDM4-202ENST00000586080 CFAP65Q6ZU64 1925 aaKnown RBP32.74■■■□□ 2.83
R3HDM4-202ENST00000586080 NAIPQ13075 1403 aa32.71■■■□□ 2.83
R3HDM4-202ENST00000586080 TET3O43151 1660 aa32.69■■■□□ 2.82
R3HDM4-202ENST00000586080 RPRD2Q5VT52 1461 aaKnown RBP32.67■■■□□ 2.82
R3HDM4-202ENST00000586080 ANKLE2Q86XL3 938 aa32.66■■■□□ 2.82
R3HDM4-202ENST00000586080 STAG3Q9UJ98 1225 aa32.66■■■□□ 2.82
R3HDM4-202ENST00000586080 HFM1A2PYH4 1435 aa32.66■■■□□ 2.82
R3HDM4-202ENST00000586080 NOS1P29475 1434 aa32.66■■■□□ 2.82
R3HDM4-202ENST00000586080 IQGAP3Q86VI3 1631 aa32.66■■■□□ 2.82
R3HDM4-202ENST00000586080 GCC2Q8IWJ2 1684 aa32.64■■■□□ 2.82
R3HDM4-202ENST00000586080 SYNMO15061 1565 aa32.63■■■□□ 2.81
R3HDM4-202ENST00000586080 IDI1Q13907 227 aa32.61■■■□□ 2.81
R3HDM4-202ENST00000586080 PIK3C2BO00750 1634 aa32.59■■■□□ 2.81
R3HDM4-202ENST00000586080 UBR1Q8IWV7 1749 aa32.58■■■□□ 2.81
R3HDM4-202ENST00000586080 POLR1AO95602 1720 aaPredicted RBP32.57■■■□□ 2.8
R3HDM4-202ENST00000586080 TRIM52Q96A61 297 aa32.56■■■□□ 2.8
R3HDM4-202ENST00000586080 SLC52A1Q9NWF4 448 aa32.56■■■□□ 2.8
R3HDM4-202ENST00000586080 NEURL4Q96JN8 1562 aa32.56■■■□□ 2.8
R3HDM4-202ENST00000586080 CERKQ8TCT0 537 aa32.55■■■□□ 2.8
R3HDM4-202ENST00000586080 E9PCH4 1651 aa32.55■■■□□ 2.8
R3HDM4-202ENST00000586080 ILDR1Q86SU0 546 aaPredicted RBP32.53■■■□□ 2.8
R3HDM4-202ENST00000586080 NPHP4O75161 1426 aaPredicted RBP32.52■■■□□ 2.8
R3HDM4-202ENST00000586080 ZNF335Q9H4Z2 1342 aaPredicted RBP32.51■■■□□ 2.8
R3HDM4-202ENST00000586080 ADGRB3O60242 1522 aa32.5■■■□□ 2.79
R3HDM4-202ENST00000586080 TXNDC2Q86VQ3 553 aa32.49■■■□□ 2.79
R3HDM4-202ENST00000586080 EID1Q9Y6B2 187 aa32.49■■■□□ 2.79
R3HDM4-202ENST00000586080 SCAF11Q99590 1463 aaKnown RBP32.48■■■□□ 2.79
R3HDM4-202ENST00000586080 TMEM2Q9UHN6 1383 aa32.48■■■□□ 2.79
R3HDM4-202ENST00000586080 SLIT1O75093 1534 aa32.48■■■□□ 2.79
R3HDM4-202ENST00000586080 ARHGAP23Q9P227 1491 aa32.48■■■□□ 2.79
R3HDM4-202ENST00000586080 CHGAP10645 457 aaKnown RBP32.47■■■□□ 2.79
R3HDM4-202ENST00000586080 MED14O60244 1454 aa32.47■■■□□ 2.79
R3HDM4-202ENST00000586080 LTKP29376 864 aa32.46■■■□□ 2.79
R3HDM4-202ENST00000586080 FBXO41Q8TF61 875 aa32.44■■■□□ 2.78
R3HDM4-202ENST00000586080 LTBP4Q8N2S1 1624 aa32.44■■■□□ 2.78
R3HDM4-202ENST00000586080 KDM5AP29375 1690 aaKnown RBP32.42■■■□□ 2.78
R3HDM4-202ENST00000586080 IQGAP1P46940 1657 aa32.41■■■□□ 2.78
R3HDM4-202ENST00000586080 SLC4A1APQ9BWU0 796 aaKnown RBP32.4■■■□□ 2.78
R3HDM4-202ENST00000586080 SETD5Q9C0A6 1442 aa32.34■■■□□ 2.77
R3HDM4-202ENST00000586080 SPHKAPQ2M3C7 1700 aa32.33■■■□□ 2.77
R3HDM4-202ENST00000586080 TMEM131LA2VDJ0 1609 aa32.33■■■□□ 2.77
R3HDM4-202ENST00000586080 PPP1R15AO75807 674 aaPredicted RBP32.32■■■□□ 2.76
R3HDM4-202ENST00000586080 RIMS2Q9UQ26 1411 aa32.32■■■□□ 2.76
R3HDM4-202ENST00000586080 BCANQ96GW7 911 aa32.3■■■□□ 2.76
R3HDM4-202ENST00000586080 SENP3Q9H4L4 574 aaPredicted RBP32.3■■■□□ 2.76
R3HDM4-202ENST00000586080 HDGFP51858 240 aaKnown RBP32.28■■■□□ 2.76
R3HDM4-202ENST00000586080 ZFYVE9O95405 1425 aa32.27■■■□□ 2.76
R3HDM4-202ENST00000586080 TRPM2O94759 1503 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms