RNA–Protein interactions for RNA: ENST00000585855.2

TCF3-206, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 1,170 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-206ENST00000585855 UNC13BO14795 1591 aa29.72■■■□□ 2.35
TCF3-206ENST00000585855 ACIN1Q9UKV3 1341 aaKnown RBP29.71■■■□□ 2.35
TCF3-206ENST00000585855 PRDM15P57071 1507 aaPredicted RBP29.68■■■□□ 2.34
TCF3-206ENST00000585855 HRCP23327 699 aa29.68■■■□□ 2.34
TCF3-206ENST00000585855 MROH1Q8NDA8 1641 aa29.67■■■□□ 2.34
TCF3-206ENST00000585855 GGT6Q6P531 493 aa29.66■■■□□ 2.34
TCF3-206ENST00000585855 KANK1Q14678 1352 aa29.64■■■□□ 2.34
TCF3-206ENST00000585855 MLECQ14165 292 aa29.63■■■□□ 2.33
TCF3-206ENST00000585855 FAM135AQ9P2D6 1515 aa29.62■■■□□ 2.33
TCF3-206ENST00000585855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.62■■■□□ 2.33
TCF3-206ENST00000585855 TRIM52Q96A61 297 aa29.61■■■□□ 2.33
TCF3-206ENST00000585855 PPP6R1Q9UPN7 881 aa29.61■■■□□ 2.33
TCF3-206ENST00000585855 NUP155O75694 1391 aa29.6■■■□□ 2.33
TCF3-206ENST00000585855 KDM5DQ9BY66 1539 aa29.6■■■□□ 2.33
TCF3-206ENST00000585855 VWDEQ8N2E2 1590 aa29.59■■■□□ 2.33
TCF3-206ENST00000585855 IQGAP3Q86VI3 1631 aa29.59■■■□□ 2.33
TCF3-206ENST00000585855 ZC3H13Q5T200 1668 aaKnown RBP29.59■■■□□ 2.33
TCF3-206ENST00000585855 ABCC3O15438 1527 aa29.55■■■□□ 2.32
TCF3-206ENST00000585855 FER1L4A9Z1Z3 1794 aa29.54■■■□□ 2.32
TCF3-206ENST00000585855 CEP152O94986 1710 aa29.54■■■□□ 2.32
TCF3-206ENST00000585855 WASHC2CQ9Y4E1 1318 aa29.54■■■□□ 2.32
TCF3-206ENST00000585855 ESF1Q9H501 851 aaKnown RBP29.54■■■□□ 2.32
TCF3-206ENST00000585855 ADAMTSL3P82987 1691 aa29.53■■■□□ 2.32
TCF3-206ENST00000585855 LMTK2Q8IWU2 1503 aa29.52■■■□□ 2.32
TCF3-206ENST00000585855 CNTLNQ9NXG0 1405 aa29.52■■■□□ 2.32
TCF3-206ENST00000585855 CLTCQ00610 1675 aaKnown RBP29.51■■■□□ 2.31
TCF3-206ENST00000585855 TET3O43151 1660 aa29.5■■■□□ 2.31
TCF3-206ENST00000585855 PZPP20742 1482 aa29.5■■■□□ 2.31
TCF3-206ENST00000585855 MADDQ8WXG6 1647 aa29.49■■■□□ 2.31
TCF3-206ENST00000585855 CAMSAP1Q5T5Y3 1602 aa29.48■■■□□ 2.31
TCF3-206ENST00000585855 MROH2AA6NES4 1674 aa29.47■■■□□ 2.31
TCF3-206ENST00000585855 EFCAB6Q5THR3 1501 aa29.45■■■□□ 2.31
TCF3-206ENST00000585855 SLC4A1APQ9BWU0 796 aaKnown RBP29.45■■■□□ 2.31
TCF3-206ENST00000585855 RIMS1Q86UR5 1692 aaKnown RBP29.44■■■□□ 2.3
TCF3-206ENST00000585855 MPHOSPH9Q99550 1183 aa29.42■■■□□ 2.3
TCF3-206ENST00000585855 ARHGAP31Q2M1Z3 1444 aa29.39■■■□□ 2.3
TCF3-206ENST00000585855 E9PCH4 1651 aa29.38■■■□□ 2.29
TCF3-206ENST00000585855 RPRD2Q5VT52 1461 aaKnown RBP29.37■■■□□ 2.29
TCF3-206ENST00000585855 ZMYM3Q14202 1370 aa29.37■■■□□ 2.29
TCF3-206ENST00000585855 PKD2Q13563 968 aa29.36■■■□□ 2.29
TCF3-206ENST00000585855 NPATQ14207 1427 aa29.35■■■□□ 2.29
TCF3-206ENST00000585855 C3P01024 1663 aa29.34■■■□□ 2.29
TCF3-206ENST00000585855 DHX57Q6P158 1386 aaKnown RBP29.33■■■□□ 2.29
TCF3-206ENST00000585855 KDM4FA0A1W2PPD8 638 aa29.29■■■□□ 2.28
TCF3-206ENST00000585855 PTPRMP28827 1452 aa29.29■■■□□ 2.28
TCF3-206ENST00000585855 PREX1Q8TCU6 1659 aa29.28■■■□□ 2.28
TCF3-206ENST00000585855 CFAP65Q6ZU64 1925 aaKnown RBP29.28■■■□□ 2.28
TCF3-206ENST00000585855 SPHKAPQ2M3C7 1700 aa29.26■■■□□ 2.27
TCF3-206ENST00000585855 ERVK-7P63135 1459 aa29.26■■■□□ 2.27
TCF3-206ENST00000585855 FOXD1Q16676 465 aa29.24■■■□□ 2.27
TCF3-206ENST00000585855 SPATA31D1Q6ZQQ2 1576 aa29.24■■■□□ 2.27
TCF3-206ENST00000585855 CEBPAP49715 358 aaPredicted RBP29.23■■■□□ 2.27
TCF3-206ENST00000585855 NOS1P29475 1434 aa29.22■■■□□ 2.27
TCF3-206ENST00000585855 PTPRTO14522 1441 aa29.21■■■□□ 2.27
TCF3-206ENST00000585855 FBXO31Q5XUX0 539 aaPredicted RBP29.21■■■□□ 2.27
TCF3-206ENST00000585855 TRPM2O94759 1503 aa29.2■■■□□ 2.27
TCF3-206ENST00000585855 PLPPR3Q6T4P5 718 aa29.2■■■□□ 2.26
TCF3-206ENST00000585855 SYNMO15061 1565 aa29.18■■■□□ 2.26
TCF3-206ENST00000585855 ANKRD30BQ9BXX2 1392 aa29.17■■■□□ 2.26
TCF3-206ENST00000585855 PLA2R1Q13018 1463 aa29.17■■■□□ 2.26
TCF3-206ENST00000585855 TNRQ92752 1358 aa29.16■■■□□ 2.26
TCF3-206ENST00000585855 CCER1Q8TC90 406 aaPredicted RBP29.15■■■□□ 2.26
TCF3-206ENST00000585855 CCDC144AA2RUR9 1427 aa29.11■■■□□ 2.25
TCF3-206ENST00000585855 PIK3C2BO00750 1634 aa29.11■■■□□ 2.25
TCF3-206ENST00000585855 SETD1BQ9UPS6 1966 aaKnown RBP29.11■■■□□ 2.25
TCF3-206ENST00000585855 SLC52A1Q9NWF4 448 aa29.1■■■□□ 2.25
TCF3-206ENST00000585855 CLSPNQ9HAW4 1339 aa29.1■■■□□ 2.25
TCF3-206ENST00000585855 CLTCL1P53675 1640 aa29.09■■■□□ 2.25
TCF3-206ENST00000585855 NLRP1Q9C000 1473 aa29.08■■■□□ 2.25
TCF3-206ENST00000585855 UGGT1Q9NYU2 1555 aa29.08■■■□□ 2.25
TCF3-206ENST00000585855 MYO3AQ8NEV4 1616 aa29.07■■■□□ 2.24
TCF3-206ENST00000585855 AEBP2Q6ZN18 517 aaPredicted RBP29.05■■■□□ 2.24
TCF3-206ENST00000585855 KIF1BO60333 1816 aa29.02■■■□□ 2.24
TCF3-206ENST00000585855 IDI1Q13907 227 aa29.02■■■□□ 2.24
TCF3-206ENST00000585855 ZNF142P52746 1687 aaPredicted RBP28.99■■■□□ 2.23
TCF3-206ENST00000585855 UHRF1BP1Q6BDS2 1440 aa28.99■■■□□ 2.23
TCF3-206ENST00000585855 CEP170BQ9Y4F5 1589 aaPredicted RBP28.99■■■□□ 2.23
TCF3-206ENST00000585855 KDM5AP29375 1690 aaKnown RBP28.99■■■□□ 2.23
TCF3-206ENST00000585855 A2ML1A8K2U0 1454 aa28.98■■■□□ 2.23
TCF3-206ENST00000585855 ADGRB3O60242 1522 aa28.98■■■□□ 2.23
TCF3-206ENST00000585855 TMEM131LA2VDJ0 1609 aa28.95■■■□□ 2.23
TCF3-206ENST00000585855 SIN3AQ96ST3 1273 aa28.95■■■□□ 2.22
TCF3-206ENST00000585855 STAG3Q9UJ98 1225 aa28.95■■■□□ 2.22
TCF3-206ENST00000585855 UBR1Q8IWV7 1749 aa28.94■■■□□ 2.22
TCF3-206ENST00000585855 NEURL4Q96JN8 1562 aa28.94■■■□□ 2.22
TCF3-206ENST00000585855 CHGAP10645 457 aaKnown RBP28.93■■■□□ 2.22
TCF3-206ENST00000585855 NEUROD1Q13562 356 aa28.92■■■□□ 2.22
TCF3-206ENST00000585855 MYO5BQ9ULV0 1848 aa28.91■■■□□ 2.22
TCF3-206ENST00000585855 SPATA31E1Q6ZUB1 1445 aa28.91■■■□□ 2.22
TCF3-206ENST00000585855 THEMISQ8N1K5 641 aaPredicted RBP28.85■■■□□ 2.21
TCF3-206ENST00000585855 ZNF326Q5BKZ1 582 aaKnown RBP28.84■■■□□ 2.21
TCF3-206ENST00000585855 RGL3Q3MIN7 710 aa28.83■■■□□ 2.21
TCF3-206ENST00000585855 TONSLQ96HA7 1378 aa28.83■■■□□ 2.21
TCF3-206ENST00000585855 LMTK3Q96Q04 1460 aa28.82■■■□□ 2.2
TCF3-206ENST00000585855 RPGRIP1LQ68CZ1 1315 aa28.8■■■□□ 2.2
TCF3-206ENST00000585855 SLIT1O75093 1534 aa28.79■■■□□ 2.2
TCF3-206ENST00000585855 TMEM2Q9UHN6 1383 aa28.78■■■□□ 2.2
TCF3-206ENST00000585855 NEXMIFQ5QGS0 1516 aa28.77■■■□□ 2.2
TCF3-206ENST00000585855 PPLO60437 1756 aa28.77■■■□□ 2.2
TCF3-206ENST00000585855 ARHGAP23Q9P227 1491 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms