RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 CAMSAP1Q5T5Y3 1602 aa28.98■■■□□ 2.23
ATG4D-203ENST00000585752 CERKQ8TCT0 537 aa28.96■■■□□ 2.23
ATG4D-203ENST00000585752 ZNF142P52746 1687 aaPredicted RBP28.96■■■□□ 2.23
ATG4D-203ENST00000585752 EIF2AK4Q9P2K8 1649 aaKnown RBP28.95■■■□□ 2.23
ATG4D-203ENST00000585752 CROCC2H7BZ55 1655 aa28.95■■■□□ 2.22
ATG4D-203ENST00000585752 CEP170BQ9Y4F5 1589 aaPredicted RBP28.94■■■□□ 2.22
ATG4D-203ENST00000585752 PTPRTO14522 1441 aa28.94■■■□□ 2.22
ATG4D-203ENST00000585752 NCOA1Q15788 1441 aa28.93■■■□□ 2.22
ATG4D-203ENST00000585752 FGD6Q6ZV73 1430 aa28.93■■■□□ 2.22
ATG4D-203ENST00000585752 DUOX2Q9NRD8 1548 aa28.92■■■□□ 2.22
ATG4D-203ENST00000585752 RNF17Q9BXT8 1623 aaKnown RBP28.9■■■□□ 2.22
ATG4D-203ENST00000585752 PZPP20742 1482 aa28.9■■■□□ 2.22
ATG4D-203ENST00000585752 ZC3H13Q5T200 1668 aaKnown RBP28.89■■■□□ 2.22
ATG4D-203ENST00000585752 TNRQ92752 1358 aa28.89■■■□□ 2.22
ATG4D-203ENST00000585752 RRP7BPQ9NSQ0 103 aa28.89■■■□□ 2.22
ATG4D-203ENST00000585752 DNMT1P26358 1616 aaKnown RBP28.89■■■□□ 2.22
ATG4D-203ENST00000585752 SHANK2Q9UPX8 1470 aa28.89■■■□□ 2.22
ATG4D-203ENST00000585752 FBXO31Q5XUX0 539 aaPredicted RBP28.88■■■□□ 2.21
ATG4D-203ENST00000585752 KIF15Q9NS87 1388 aa28.88■■■□□ 2.21
ATG4D-203ENST00000585752 ABCC5O15440 1437 aa28.87■■■□□ 2.21
ATG4D-203ENST00000585752 DAPK1P53355 1430 aa28.87■■■□□ 2.21
ATG4D-203ENST00000585752 PKD2Q13563 968 aa28.87■■■□□ 2.21
ATG4D-203ENST00000585752 A2ML1A8K2U0 1454 aa28.86■■■□□ 2.21
ATG4D-203ENST00000585752 TCOF1Q13428 1488 aaKnown RBP28.86■■■□□ 2.21
ATG4D-203ENST00000585752 NCKAP5LQ9HCH0 1330 aa28.86■■■□□ 2.21
ATG4D-203ENST00000585752 CFAP65Q6ZU64 1925 aaKnown RBP28.86■■■□□ 2.21
ATG4D-203ENST00000585752 FAM50AQ14320 339 aaKnown RBP28.85■■■□□ 2.21
ATG4D-203ENST00000585752 CHIC2Q9UKJ5 165 aa28.84■■■□□ 2.21
ATG4D-203ENST00000585752 PLA2R1Q13018 1463 aa28.84■■■□□ 2.21
ATG4D-203ENST00000585752 CEP152O94986 1710 aa28.83■■■□□ 2.21
ATG4D-203ENST00000585752 ANKRD30AQ9BXX3 1397 aa28.82■■■□□ 2.2
ATG4D-203ENST00000585752 ABCC3O15438 1527 aa28.8■■■□□ 2.2
ATG4D-203ENST00000585752 ERBINQ96RT1 1412 aa28.8■■■□□ 2.2
ATG4D-203ENST00000585752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.79■■■□□ 2.2
ATG4D-203ENST00000585752 KANK1Q14678 1352 aa28.77■■■□□ 2.2
ATG4D-203ENST00000585752 THEMISQ8N1K5 641 aaPredicted RBP28.76■■■□□ 2.19
ATG4D-203ENST00000585752 NLRP1Q9C000 1473 aa28.76■■■□□ 2.19
ATG4D-203ENST00000585752 POLR1AO95602 1720 aaPredicted RBP28.74■■■□□ 2.19
ATG4D-203ENST00000585752 MROH1Q8NDA8 1641 aa28.73■■■□□ 2.19
ATG4D-203ENST00000585752 UGGT1Q9NYU2 1555 aa28.72■■■□□ 2.19
ATG4D-203ENST00000585752 ANKLE2Q86XL3 938 aa28.7■■■□□ 2.18
ATG4D-203ENST00000585752 PRDM15P57071 1507 aaPredicted RBP28.69■■■□□ 2.18
ATG4D-203ENST00000585752 SPATA31D1Q6ZQQ2 1576 aa28.68■■■□□ 2.18
ATG4D-203ENST00000585752 ERVK-7P63135 1459 aa28.66■■■□□ 2.18
ATG4D-203ENST00000585752 DEPDC5O75140 1603 aa28.66■■■□□ 2.18
ATG4D-203ENST00000585752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.66■■■□□ 2.18
ATG4D-203ENST00000585752 LTBP4Q8N2S1 1624 aa28.65■■■□□ 2.18
ATG4D-203ENST00000585752 ADGRL2O95490 1459 aa28.63■■■□□ 2.17
ATG4D-203ENST00000585752 ZNF335Q9H4Z2 1342 aaPredicted RBP28.63■■■□□ 2.17
ATG4D-203ENST00000585752 PPARGC1BQ86YN6 1023 aaKnown RBP28.61■■■□□ 2.17
ATG4D-203ENST00000585752 IQSEC2Q5JU85 1478 aa28.6■■■□□ 2.17
ATG4D-203ENST00000585752 ARHGAP31Q2M1Z3 1444 aa28.6■■■□□ 2.17
ATG4D-203ENST00000585752 STAG3Q9UJ98 1225 aa28.59■■■□□ 2.17
ATG4D-203ENST00000585752 ANKRD50Q9ULJ7 1429 aa28.56■■■□□ 2.16
ATG4D-203ENST00000585752 UBR1Q8IWV7 1749 aa28.55■■■□□ 2.16
ATG4D-203ENST00000585752 NEURL4Q96JN8 1562 aa28.55■■■□□ 2.16
ATG4D-203ENST00000585752 ITGAEP38570 1179 aa28.54■■■□□ 2.16
ATG4D-203ENST00000585752 NPHP4O75161 1426 aaPredicted RBP28.53■■■□□ 2.16
ATG4D-203ENST00000585752 IQGAP1P46940 1657 aa28.52■■■□□ 2.16
ATG4D-203ENST00000585752 LMTK2Q8IWU2 1503 aa28.51■■■□□ 2.15
ATG4D-203ENST00000585752 EID1Q9Y6B2 187 aa28.49■■■□□ 2.15
ATG4D-203ENST00000585752 VWDEQ8N2E2 1590 aa28.49■■■□□ 2.15
ATG4D-203ENST00000585752 MED14O60244 1454 aa28.47■■■□□ 2.15
ATG4D-203ENST00000585752 UBAP1LF5GYI3 381 aa28.47■■■□□ 2.15
ATG4D-203ENST00000585752 CPS1P31327 1500 aa28.46■■■□□ 2.15
ATG4D-203ENST00000585752 PIK3C2BO00750 1634 aa28.46■■■□□ 2.15
ATG4D-203ENST00000585752 EFCAB6Q5THR3 1501 aa28.45■■■□□ 2.15
ATG4D-203ENST00000585752 TXNDC2Q86VQ3 553 aa28.45■■■□□ 2.14
ATG4D-203ENST00000585752 ROCK1Q13464 1354 aa28.44■■■□□ 2.14
ATG4D-203ENST00000585752 SCAF11Q99590 1463 aaKnown RBP28.42■■■□□ 2.14
ATG4D-203ENST00000585752 TET3O43151 1660 aa28.41■■■□□ 2.14
ATG4D-203ENST00000585752 KDM5AP29375 1690 aaKnown RBP28.4■■■□□ 2.14
ATG4D-203ENST00000585752 GCC2Q8IWJ2 1684 aa28.4■■■□□ 2.14
ATG4D-203ENST00000585752 IDI1Q13907 227 aa28.4■■■□□ 2.14
ATG4D-203ENST00000585752 SLC52A1Q9NWF4 448 aa28.39■■■□□ 2.14
ATG4D-203ENST00000585752 RPRD2Q5VT52 1461 aaKnown RBP28.38■■■□□ 2.13
ATG4D-203ENST00000585752 SLIT1O75093 1534 aa28.38■■■□□ 2.13
ATG4D-203ENST00000585752 UNC13BO14795 1591 aa28.37■■■□□ 2.13
ATG4D-203ENST00000585752 SCAF1Q9H7N4 1312 aaKnown RBP28.37■■■□□ 2.13
ATG4D-203ENST00000585752 TOM1O60784 492 aa28.36■■■□□ 2.13
ATG4D-203ENST00000585752 SYNMO15061 1565 aa28.35■■■□□ 2.13
ATG4D-203ENST00000585752 NOS1P29475 1434 aa28.35■■■□□ 2.13
ATG4D-203ENST00000585752 ARHGAP23Q9P227 1491 aa28.34■■■□□ 2.13
ATG4D-203ENST00000585752 LTKP29376 864 aa28.34■■■□□ 2.13
ATG4D-203ENST00000585752 TMEM2Q9UHN6 1383 aa28.34■■■□□ 2.13
ATG4D-203ENST00000585752 BCANQ96GW7 911 aa28.32■■■□□ 2.12
ATG4D-203ENST00000585752 NUP155O75694 1391 aa28.3■■■□□ 2.12
ATG4D-203ENST00000585752 HDGFP51858 240 aaKnown RBP28.3■■■□□ 2.12
ATG4D-203ENST00000585752 ADGRB3O60242 1522 aa28.29■■■□□ 2.12
ATG4D-203ENST00000585752 IQGAP3Q86VI3 1631 aa28.29■■■□□ 2.12
ATG4D-203ENST00000585752 CHGAP10645 457 aaKnown RBP28.28■■■□□ 2.12
ATG4D-203ENST00000585752 PIP4K2BP78356 416 aa28.28■■■□□ 2.12
ATG4D-203ENST00000585752 MYO5BQ9ULV0 1848 aa28.27■■■□□ 2.12
ATG4D-203ENST00000585752 E9PCH4 1651 aa28.26■■■□□ 2.12
ATG4D-203ENST00000585752 STRCP1A6NGW2 1772 aa28.26■■■□□ 2.11
ATG4D-203ENST00000585752 PPP1R15AO75807 674 aaPredicted RBP28.24■■■□□ 2.11
ATG4D-203ENST00000585752 RRBP1Q9P2E9 1410 aaKnown RBP28.24■■■□□ 2.11
ATG4D-203ENST00000585752 LRRC7Q96NW7 1537 aa28.19■■■□□ 2.1
ATG4D-203ENST00000585752 DISP3Q9P2K9 1392 aa28.19■■■□□ 2.1
ATG4D-203ENST00000585752 SLC26A8Q96RN1 970 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms