RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 CASC1Q6TDU7 716 aa2.3□□□□□ -2.04
NEDD4L-212ENST00000585594 RINLQ6ZS11 566 aa2.3□□□□□ -2.04
NEDD4L-212ENST00000585594 NBPF11Q86T75 865 aa2.3□□□□□ -2.04
NEDD4L-212ENST00000585594 CEP120Q8N960 986 aa2.3□□□□□ -2.04
NEDD4L-212ENST00000585594 RBM27Q9P2N5 1060 aaKnown RBP2.3□□□□□ -2.04
NEDD4L-212ENST00000585594 HDAC5Q9UQL6 1122 aa2.3□□□□□ -2.04
NEDD4L-212ENST00000585594 PPME1Q9Y570 386 aa2.3□□□□□ -2.04
NEDD4L-212ENST00000585594 ANKRD62A6NC57 917 aa2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 NRDCO43847 1150 aa2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 CHGAP10645 457 aaKnown RBP2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 ERCC3P19447 782 aa2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 CALRP27797 417 aaKnown RBP2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 IRX3P78415 501 aaPredicted RBP2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 MKRN3Q13064 507 aaKnown RBP2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 RALBP1Q15311 655 aa2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 NBPF1Q3BBV0 1214 aa2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 NBPF20Q3BBV1 942 aa2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 TSHZ1Q6ZSZ6 1077 aa2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 APBB1IPQ7Z5R6 666 aaPredicted RBP2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 RETREG2Q8NC44 543 aa2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 IL27Q8NEV9 243 aa2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 CCER1Q8TC90 406 aaPredicted RBP2.29□□□□□ -2.04
NEDD4L-212ENST00000585594 CCER2I3L3R5 266 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 RGL2O15211 777 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 SOX12O15370 315 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 ATXN8OSP0DMR3 200 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 CLCN6P51797 869 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 CALD1Q05682 793 aaKnown RBP2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 IRF5Q13568 498 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 MYBPC2Q14324 1141 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 HSP90AA2PQ14568 343 aaPredicted RBP2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 WDR78Q5VTH9 848 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 METRNQ9UJH8 293 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 CLEC11AQ9Y240 323 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 AMOTL2Q9Y2J4 779 aa2.28□□□□□ -2.04
NEDD4L-212ENST00000585594 GOLIM4O00461 696 aa2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 RIOK3O14730 519 aaKnown RBP2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 FOXD4Q12950 439 aaPredicted RBP2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 LONRF3Q496Y0 759 aa2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 CC2D1BQ5T0F9 858 aaKnown RBP2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 KRBA2Q6ZNG9 492 aa2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 BARGINQ6ZT62 677 aa2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 NME8Q8N427 588 aa2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 SPDYE1Q8NFV5 336 aaPredicted RBP2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 MICAL1Q8TDZ2 1067 aa2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 MORC4Q8TE76 937 aa2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 ZC3H15Q8WU90 426 aaKnown RBP2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 MTA3Q9BTC8 594 aa2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 HIRIP3Q9BW71 556 aaPredicted RBP2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 UBA5Q9GZZ9 404 aa2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 SUGT1Q9Y2Z0 365 aa2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 ZBTB12Q9Y330 459 aaPredicted RBP2.27□□□□□ -2.05
NEDD4L-212ENST00000585594 ZC3H4Q9UPT8 1303 aaKnown RBP2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 TESPA1A2RU30 521 aaPredicted RBP2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 UNCXA6NJT0 531 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 ST18O60284 1047 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 TRAK2O60296 914 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 PEX14O75381 377 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 MYCNP04198 464 aaPredicted RBP2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 POLD1P28340 1107 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 ANP32AP39687 249 aaKnown RBP2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 MCCD1P59942 119 aaPredicted RBP2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 FLIIQ13045 1269 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 HDAC1Q13547 482 aaPredicted RBP2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 SETDB1Q15047 1291 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 CCDC96Q2M329 555 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 NBPF9Q3BBW0 867 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 CDCA8Q53HL2 280 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 ARMCX6Q7L4S7 300 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 P3H3Q8IVL6 736 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 PLCD3Q8N3E9 789 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 SDR16C5Q8N3Y7 309 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 CCDC97Q96F63 343 aaPredicted RBP2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 DRC1Q96MC2 740 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 ZNF830Q96NB3 372 aaPredicted RBP2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 GPBP1L1Q9HC44 474 aaPredicted RBP2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 SLC52A1Q9NWF4 448 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 PRDM4Q9UKN5 801 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 SH3BP1Q9Y3L3 701 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 FARP1Q9Y4F1 1045 aaPredicted RBP2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 NUB1Q9Y5A7 615 aa2.26□□□□□ -2.05
NEDD4L-212ENST00000585594 TCERG1O14776 1098 aaKnown RBP2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 SH3BP5O60239 455 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 RAB11FIP3O75154 756 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 LIG1P18858 919 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 ARID4AP29374 1257 aaPredicted RBP2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 PSEN1P49768 467 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 FOSBP53539 338 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 HSP90AB3PQ58FF7 597 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 ZFYVE27Q5T4F4 411 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 ASTLQ6HA08 431 aaPredicted RBP2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 EGFL6Q8IUX8 553 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 OTUD6BQ8N6M0 293 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 CXorf38Q8TB03 319 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 CLUAP1Q96AJ1 413 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 SIRT1Q96EB6 747 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 TSPAN18Q96SJ8 248 aa2.25□□□□□ -2.05
NEDD4L-212ENST00000585594 CARD10Q9BWT7 1032 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms