RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 TNRQ92752 1358 aa17.08■□□□□ 0.32
CSNK1D-226ENST00000585026 WASHC2CQ9Y4E1 1318 aa17.08■□□□□ 0.32
CSNK1D-226ENST00000585026 TSPY4P0CV99 314 aa17.08■□□□□ 0.32
CSNK1D-226ENST00000585026 TSPY10P0CW01 314 aa17.08■□□□□ 0.32
CSNK1D-226ENST00000585026 CCDC141Q6ZP82 1450 aa17.07■□□□□ 0.32
CSNK1D-226ENST00000585026 FAM135AQ9P2D6 1515 aa17.06■□□□□ 0.32
CSNK1D-226ENST00000585026 THEMISQ8N1K5 641 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-226ENST00000585026 ANKLE2Q86XL3 938 aa17.05■□□□□ 0.32
CSNK1D-226ENST00000585026 TOM1O60784 492 aa17.04■□□□□ 0.32
CSNK1D-226ENST00000585026 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-226ENST00000585026 PZPP20742 1482 aa17.03■□□□□ 0.32
CSNK1D-226ENST00000585026 NCOA2Q15596 1464 aa17.03■□□□□ 0.32
CSNK1D-226ENST00000585026 KDM5DQ9BY66 1539 aa17.02■□□□□ 0.32
CSNK1D-226ENST00000585026 CAMSAP2Q08AD1 1489 aa17.01■□□□□ 0.31
CSNK1D-226ENST00000585026 DNMT1P26358 1616 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-226ENST00000585026 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
CSNK1D-226ENST00000585026 MIA2Q96PC5 1412 aa17■□□□□ 0.31
CSNK1D-226ENST00000585026 NLRP1Q9C000 1473 aa16.99■□□□□ 0.31
CSNK1D-226ENST00000585026 CPS1P31327 1500 aa16.99■□□□□ 0.31
CSNK1D-226ENST00000585026 PIP4K2BP78356 416 aa16.97■□□□□ 0.31
CSNK1D-226ENST00000585026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.97■□□□□ 0.313e-11■■■■■ 27.3
CSNK1D-226ENST00000585026 SHANK2Q9UPX8 1470 aa16.97■□□□□ 0.31
CSNK1D-226ENST00000585026 ARHGEF5Q12774 1597 aa16.95■□□□□ 0.3
CSNK1D-226ENST00000585026 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-226ENST00000585026 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
CSNK1D-226ENST00000585026 HSPA1LP34931 641 aa16.93■□□□□ 0.3
CSNK1D-226ENST00000585026 MED14O60244 1454 aa16.92■□□□□ 0.3
CSNK1D-226ENST00000585026 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
CSNK1D-226ENST00000585026 POLR1AO95602 1720 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-226ENST00000585026 NEURL4Q96JN8 1562 aa16.9■□□□□ 0.3
CSNK1D-226ENST00000585026 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
CSNK1D-226ENST00000585026 DEPDC5O75140 1603 aa16.88■□□□□ 0.29
CSNK1D-226ENST00000585026 MYOM3Q5VTT5 1437 aa16.87■□□□□ 0.29
CSNK1D-226ENST00000585026 ABCC3O15438 1527 aa16.86■□□□□ 0.29
CSNK1D-226ENST00000585026 MAST1Q9Y2H9 1570 aa16.86■□□□□ 0.29
CSNK1D-226ENST00000585026 VWDEQ8N2E2 1590 aa16.85■□□□□ 0.29
CSNK1D-226ENST00000585026 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-226ENST00000585026 ERVK-7P63135 1459 aa16.85■□□□□ 0.29
CSNK1D-226ENST00000585026 RNF17Q9BXT8 1623 aaKnown RBP16.85■□□□□ 0.29
CSNK1D-226ENST00000585026 APLP2Q06481 763 aa16.84■□□□□ 0.29
CSNK1D-226ENST00000585026 MAP3K1Q13233 1512 aa16.84■□□□□ 0.29
CSNK1D-226ENST00000585026 ZC3H13Q5T200 1668 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-226ENST00000585026 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-226ENST00000585026 EIF2AK4Q9P2K8 1649 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-226ENST00000585026 EID1Q9Y6B2 187 aa16.83■□□□□ 0.28
CSNK1D-226ENST00000585026 DUOX2Q9NRD8 1548 aa16.82■□□□□ 0.28
CSNK1D-226ENST00000585026 TXNDC2Q86VQ3 553 aa16.81■□□□□ 0.28
CSNK1D-226ENST00000585026 IQGAP1P46940 1657 aa16.81■□□□□ 0.28
CSNK1D-226ENST00000585026 LOC105371045A0A1W2PR82 267 aa16.8■□□□□ 0.28
CSNK1D-226ENST00000585026 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
CSNK1D-226ENST00000585026 MED1Q15648 1581 aaPredicted RBP16.8■□□□□ 0.28
CSNK1D-226ENST00000585026 KANK1Q14678 1352 aa16.79■□□□□ 0.28
CSNK1D-226ENST00000585026 KIF15Q9NS87 1388 aa16.79■□□□□ 0.28
CSNK1D-226ENST00000585026 SCAF11Q99590 1463 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-226ENST00000585026 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
CSNK1D-226ENST00000585026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.288e-9■□□□□ 9
CSNK1D-226ENST00000585026 RRP7BPQ9NSQ0 103 aa16.78■□□□□ 0.28
CSNK1D-226ENST00000585026 LRRC7Q96NW7 1537 aa16.78■□□□□ 0.28
CSNK1D-226ENST00000585026 ERBINQ96RT1 1412 aa16.78■□□□□ 0.28
CSNK1D-226ENST00000585026 LTKP29376 864 aa16.75■□□□□ 0.27
CSNK1D-226ENST00000585026 SYNMO15061 1565 aa16.75■□□□□ 0.27
CSNK1D-226ENST00000585026 MROH1Q8NDA8 1641 aa16.74■□□□□ 0.27
CSNK1D-226ENST00000585026 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-226ENST00000585026 ARHGAP23Q9P227 1491 aa16.73■□□□□ 0.27
CSNK1D-226ENST00000585026 ABCC5O15440 1437 aa16.73■□□□□ 0.27
CSNK1D-226ENST00000585026 SLIT1O75093 1534 aa16.73■□□□□ 0.27
CSNK1D-226ENST00000585026 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-226ENST00000585026 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
CSNK1D-226ENST00000585026 TMEM2Q9UHN6 1383 aa16.72■□□□□ 0.27
CSNK1D-226ENST00000585026 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.27
CSNK1D-226ENST00000585026 ALKQ9UM73 1620 aa16.7■□□□□ 0.26
CSNK1D-226ENST00000585026 CEP152O94986 1710 aa16.7■□□□□ 0.26
CSNK1D-226ENST00000585026 DAPK1P53355 1430 aa16.7■□□□□ 0.26
CSNK1D-226ENST00000585026 KCNA6P17658 529 aa16.68■□□□□ 0.26
CSNK1D-226ENST00000585026 IDI1Q13907 227 aa16.68■□□□□ 0.26
CSNK1D-226ENST00000585026 CFAP65Q6ZU64 1925 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-226ENST00000585026 CHIC2Q9UKJ5 165 aa16.67■□□□□ 0.26
CSNK1D-226ENST00000585026 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
CSNK1D-226ENST00000585026 FGD6Q6ZV73 1430 aa16.66■□□□□ 0.26
CSNK1D-226ENST00000585026 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
CSNK1D-226ENST00000585026 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
CSNK1D-226ENST00000585026 FAM135BQ49AJ0 1406 aa16.65■□□□□ 0.26
CSNK1D-226ENST00000585026 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-226ENST00000585026 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
CSNK1D-226ENST00000585026 BCANQ96GW7 911 aa16.65■□□□□ 0.26
CSNK1D-226ENST00000585026 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
CSNK1D-226ENST00000585026 LMTK2Q8IWU2 1503 aa16.65■□□□□ 0.26
CSNK1D-226ENST00000585026 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
CSNK1D-226ENST00000585026 SLC26A8Q96RN1 970 aa16.63■□□□□ 0.25
CSNK1D-226ENST00000585026 PIK3C2BO00750 1634 aa16.62■□□□□ 0.25
CSNK1D-226ENST00000585026 CROCC2H7BZ55 1655 aa16.62■□□□□ 0.25
CSNK1D-226ENST00000585026 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-226ENST00000585026 NOS1P29475 1434 aa16.6■□□□□ 0.25
CSNK1D-226ENST00000585026 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-226ENST00000585026 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-226ENST00000585026 MSH6P52701 1360 aa16.58■□□□□ 0.24
CSNK1D-226ENST00000585026 NKTRP30414 1462 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-226ENST00000585026 RPRD2Q5VT52 1461 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-226ENST00000585026 ANKRD50Q9ULJ7 1429 aa16.56■□□□□ 0.24
CSNK1D-226ENST00000585026 RGS17Q9UGC6 210 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms