RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ESF1Q9H501 851 aaKnown RBP14.99□□□□□ -0.01
TOP3A-217ENST00000584582 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
TOP3A-217ENST00000584582 TMEM132EQ6IEE7 984 aa14.98□□□□□ -0.01
TOP3A-217ENST00000584582 KANK1Q14678 1352 aa14.98□□□□□ -0.01
TOP3A-217ENST00000584582 CDCA7LQ96GN5 454 aa14.98□□□□□ -0.01
TOP3A-217ENST00000584582 NUDCQ9Y266 331 aa14.98□□□□□ -0.01
TOP3A-217ENST00000584582 WASHC2CQ9Y4E1 1318 aa14.98□□□□□ -0.01
TOP3A-217ENST00000584582 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
TOP3A-217ENST00000584582 DAXXQ9UER7 740 aaPredicted RBP14.97□□□□□ -0.01
TOP3A-217ENST00000584582 ZBED9Q6R2W3 1325 aa14.97□□□□□ -0.01
TOP3A-217ENST00000584582 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
TOP3A-217ENST00000584582 SCAPERQ9BY12 1400 aa14.96□□□□□ -0.01
TOP3A-217ENST00000584582 RAPGEF3O95398 923 aa14.96□□□□□ -0.02
TOP3A-217ENST00000584582 RALBP1Q15311 655 aa14.96□□□□□ -0.02
TOP3A-217ENST00000584582 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
TOP3A-217ENST00000584582 MYBBP1AQ9BQG0 1328 aaKnown RBP14.95□□□□□ -0.02
TOP3A-217ENST00000584582 PLEKHH2Q8IVE3 1493 aa14.94□□□□□ -0.02
TOP3A-217ENST00000584582 RCAN3Q9UKA8 241 aa14.94□□□□□ -0.02
TOP3A-217ENST00000584582 KIF14Q15058 1648 aa14.94□□□□□ -0.02
TOP3A-217ENST00000584582 CEP170Q5SW79 1584 aa14.94□□□□□ -0.02
TOP3A-217ENST00000584582 ANP32AP39687 249 aaKnown RBP14.94□□□□□ -0.02
TOP3A-217ENST00000584582 CDCA8Q53HL2 280 aa14.93□□□□□ -0.02
TOP3A-217ENST00000584582 ARID4BQ4LE39 1312 aaPredicted RBP14.93□□□□□ -0.02
TOP3A-217ENST00000584582 PNISRQ8TF01 805 aaKnown RBP14.92□□□□□ -0.02
TOP3A-217ENST00000584582 RRP7AQ9Y3A4 280 aaKnown RBP14.92□□□□□ -0.02
TOP3A-217ENST00000584582 SRPK2P78362 688 aaKnown RBP14.91□□□□□ -0.02
TOP3A-217ENST00000584582 FRAT1Q92837 279 aaPredicted RBP14.91□□□□□ -0.02
TOP3A-217ENST00000584582 EXOC6Q8TAG9 804 aa14.91□□□□□ -0.02
TOP3A-217ENST00000584582 POGKQ9P215 609 aa14.91□□□□□ -0.02
TOP3A-217ENST00000584582 U2SURPO15042 1029 aaKnown RBP14.9□□□□□ -0.02
TOP3A-217ENST00000584582 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
TOP3A-217ENST00000584582 PZPP20742 1482 aa14.89□□□□□ -0.03
TOP3A-217ENST00000584582 RGS3P49796 1198 aa14.89□□□□□ -0.03
TOP3A-217ENST00000584582 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
TOP3A-217ENST00000584582 MORC1Q86VD1 984 aa14.89□□□□□ -0.03
TOP3A-217ENST00000584582 SOX12O15370 315 aa14.88□□□□□ -0.03
TOP3A-217ENST00000584582 ANP32EQ9BTT0 268 aa14.88□□□□□ -0.03
TOP3A-217ENST00000584582 ADAMTS8Q9UP79 889 aa14.88□□□□□ -0.03
TOP3A-217ENST00000584582 NUP160Q12769 1436 aa14.88□□□□□ -0.03
TOP3A-217ENST00000584582 DENND4BO75064 1496 aaPredicted RBP14.86□□□□□ -0.03
TOP3A-217ENST00000584582 NUTM2FA1L443 756 aa14.86□□□□□ -0.03
TOP3A-217ENST00000584582 LRRIQ1Q96JM4 1722 aa14.86□□□□□ -0.03
TOP3A-217ENST00000584582 APAF1O14727 1248 aa14.85□□□□□ -0.03
TOP3A-217ENST00000584582 RTL5Q5HYW3 569 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-217ENST00000584582 SKAP1Q86WV1 359 aa14.85□□□□□ -0.03
TOP3A-217ENST00000584582 SYCP2Q9BX26 1530 aa14.84□□□□□ -0.03
TOP3A-217ENST00000584582 LAS1LQ9Y4W2 734 aaKnown RBP14.83□□□□□ -0.04
TOP3A-217ENST00000584582 BCL2L13Q9BXK5 485 aa14.82□□□□□ -0.04
TOP3A-217ENST00000584582 TRAPPC8Q9Y2L5 1435 aa14.82□□□□□ -0.04
TOP3A-217ENST00000584582 SLC12A5Q9H2X9 1139 aa14.81□□□□□ -0.04
TOP3A-217ENST00000584582 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-217ENST00000584582 MINK1Q8N4C8 1332 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-217ENST00000584582 U2AF1L5P0DN76 240 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-217ENST00000584582 U2AF1Q01081 240 aaKnown RBP eCLIP14.81□□□□□ -0.04
TOP3A-217ENST00000584582 DNMT1P26358 1616 aaKnown RBP14.81□□□□□ -0.04
TOP3A-217ENST00000584582 DISP3Q9P2K9 1392 aa14.8□□□□□ -0.04
TOP3A-217ENST00000584582 TEX14Q8IWB6 1497 aa14.8□□□□□ -0.04
TOP3A-217ENST00000584582 ADGRF5Q8IZF2 1346 aa14.8□□□□□ -0.04
TOP3A-217ENST00000584582 CLUAP1Q96AJ1 413 aa14.8□□□□□ -0.04
TOP3A-217ENST00000584582 NEFMP07197 916 aa14.79□□□□□ -0.04
TOP3A-217ENST00000584582 FAM69CQ0P6D2 419 aa14.79□□□□□ -0.04
TOP3A-217ENST00000584582 RRP1P56182 461 aaKnown RBP14.79□□□□□ -0.04
TOP3A-217ENST00000584582 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-217ENST00000584582 CABP2Q9NPB3 220 aa14.78□□□□□ -0.04
TOP3A-217ENST00000584582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.78□□□□□ -0.04
TOP3A-217ENST00000584582 CRBNQ96SW2 442 aa14.78□□□□□ -0.04
TOP3A-217ENST00000584582 PPP2R1AP30153 589 aa14.77□□□□□ -0.05
TOP3A-217ENST00000584582 GOLGA2Q08379 1002 aa14.77□□□□□ -0.05
TOP3A-217ENST00000584582 CFAP53Q96M91 514 aa14.76□□□□□ -0.05
TOP3A-217ENST00000584582 ERCC6L2Q5T890 1561 aa14.75□□□□□ -0.05
TOP3A-217ENST00000584582 ERBINQ96RT1 1412 aa14.74□□□□□ -0.05
TOP3A-217ENST00000584582 CENPJQ9HC77 1338 aaPredicted RBP14.73□□□□□ -0.05
TOP3A-217ENST00000584582 BRD4O60885 1362 aaPredicted RBP14.73□□□□□ -0.05
TOP3A-217ENST00000584582 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
TOP3A-217ENST00000584582 ZBTB7CA1YPR0 619 aa14.73□□□□□ -0.05
TOP3A-217ENST00000584582 TESK2Q96S53 571 aa14.73□□□□□ -0.05
TOP3A-217ENST00000584582 GGNBP2Q9H3C7 697 aa14.73□□□□□ -0.05
TOP3A-217ENST00000584582 FAM135AQ9P2D6 1515 aa14.72□□□□□ -0.05
TOP3A-217ENST00000584582 EIF3AQ14152 1382 aaKnown RBP14.71□□□□□ -0.05
TOP3A-217ENST00000584582 C14orf37Q86TY3 774 aa14.71□□□□□ -0.05
TOP3A-217ENST00000584582 ERICH6BQ5W0A0 696 aa14.7□□□□□ -0.06
TOP3A-217ENST00000584582 ABCC10Q5T3U5 1492 aa14.7□□□□□ -0.06
TOP3A-217ENST00000584582 ITSN2Q9NZM3 1697 aa14.7□□□□□ -0.06
TOP3A-217ENST00000584582 PLCH2O75038 1416 aa14.7□□□□□ -0.06
TOP3A-217ENST00000584582 SPATA31E1Q6ZUB1 1445 aa14.7□□□□□ -0.06
TOP3A-217ENST00000584582 MBD5Q9P267 1494 aa14.7□□□□□ -0.06
TOP3A-217ENST00000584582 FANCAO15360 1455 aa14.69□□□□□ -0.06
TOP3A-217ENST00000584582 C20orf194Q5TEA3 1177 aa14.69□□□□□ -0.06
TOP3A-217ENST00000584582 FBXO31Q5XUX0 539 aaPredicted RBP14.69□□□□□ -0.06
TOP3A-217ENST00000584582 ADGRL1O94910 1474 aa14.69□□□□□ -0.06
TOP3A-217ENST00000584582 MAPK8IP3Q9UPT6 1336 aa14.69□□□□□ -0.06
TOP3A-217ENST00000584582 GCC2Q8IWJ2 1684 aa14.69□□□□□ -0.06
TOP3A-217ENST00000584582 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
TOP3A-217ENST00000584582 MTHFSP49914 203 aa14.68□□□□□ -0.06
TOP3A-217ENST00000584582 NOP58Q9Y2X3 529 aaKnown RBP14.68□□□□□ -0.06
TOP3A-217ENST00000584582 VGFO15240 615 aaPredicted RBP14.68□□□□□ -0.06
TOP3A-217ENST00000584582 PRAG1Q86YV5 1406 aa14.68□□□□□ -0.06
TOP3A-217ENST00000584582 SLC4A3P48751 1232 aa14.67□□□□□ -0.06
TOP3A-217ENST00000584582 PDE3BQ13370 1112 aa14.67□□□□□ -0.06
TOP3A-217ENST00000584582 COG6Q9Y2V7 657 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms