RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 RNF17Q9BXT8 1623 aaKnown RBP27.25■■□□□ 1.95
RFFL-211ENST00000584541 DEPDC5O75140 1603 aa27.24■■□□□ 1.95
RFFL-211ENST00000584541 UNC13BO14795 1591 aa27.24■■□□□ 1.95
RFFL-211ENST00000584541 HRCP23327 699 aa27.24■■□□□ 1.95
RFFL-211ENST00000584541 TRIM52Q96A61 297 aa27.19■■□□□ 1.94
RFFL-211ENST00000584541 GGT6Q6P531 493 aa27.18■■□□□ 1.94
RFFL-211ENST00000584541 KANK1Q14678 1352 aa27.18■■□□□ 1.94
RFFL-211ENST00000584541 PRDM15P57071 1507 aaPredicted RBP27.17■■□□□ 1.94
RFFL-211ENST00000584541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.17■■□□□ 1.94
RFFL-211ENST00000584541 MROH1Q8NDA8 1641 aa27.16■■□□□ 1.94
RFFL-211ENST00000584541 NUP155O75694 1391 aa27.14■■□□□ 1.94
RFFL-211ENST00000584541 IQGAP3Q86VI3 1631 aa27.13■■□□□ 1.93
RFFL-211ENST00000584541 MLECQ14165 292 aa27.13■■□□□ 1.93
RFFL-211ENST00000584541 KDM5DQ9BY66 1539 aa27.12■■□□□ 1.93
RFFL-211ENST00000584541 ZC3H13Q5T200 1668 aaKnown RBP27.12■■□□□ 1.93
RFFL-211ENST00000584541 PPP6R1Q9UPN7 881 aa27.11■■□□□ 1.93
RFFL-211ENST00000584541 FAM135AQ9P2D6 1515 aa27.11■■□□□ 1.93
RFFL-211ENST00000584541 CEP152O94986 1710 aa27.1■■□□□ 1.93
RFFL-211ENST00000584541 VWDEQ8N2E2 1590 aa27.09■■□□□ 1.93
RFFL-211ENST00000584541 ILDR1Q86SU0 546 aaPredicted RBP27.07■■□□□ 1.92
RFFL-211ENST00000584541 ESF1Q9H501 851 aaKnown RBP27.07■■□□□ 1.92
RFFL-211ENST00000584541 WASHC2CQ9Y4E1 1318 aa27.07■■□□□ 1.92
RFFL-211ENST00000584541 FER1L4A9Z1Z3 1794 aa27.07■■□□□ 1.92
RFFL-211ENST00000584541 CLTCQ00610 1675 aaKnown RBP27.05■■□□□ 1.92
RFFL-211ENST00000584541 TET3O43151 1660 aa27.05■■□□□ 1.92
RFFL-211ENST00000584541 ABCC3O15438 1527 aa27.04■■□□□ 1.92
RFFL-211ENST00000584541 PZPP20742 1482 aa27.03■■□□□ 1.92
RFFL-211ENST00000584541 LMTK2Q8IWU2 1503 aa27.03■■□□□ 1.92
RFFL-211ENST00000584541 SLC4A1APQ9BWU0 796 aaKnown RBP27.02■■□□□ 1.92
RFFL-211ENST00000584541 CAMSAP1Q5T5Y3 1602 aa27.01■■□□□ 1.92
RFFL-211ENST00000584541 CNTLNQ9NXG0 1405 aa27■■□□□ 1.91
RFFL-211ENST00000584541 MPHOSPH9Q99550 1183 aa27■■□□□ 1.91
RFFL-211ENST00000584541 ADAMTSL3P82987 1691 aa27■■□□□ 1.91
RFFL-211ENST00000584541 MROH2AA6NES4 1674 aa26.99■■□□□ 1.91
RFFL-211ENST00000584541 MADDQ8WXG6 1647 aa26.98■■□□□ 1.91
RFFL-211ENST00000584541 EFCAB6Q5THR3 1501 aa26.97■■□□□ 1.91
RFFL-211ENST00000584541 E9PCH4 1651 aa26.95■■□□□ 1.9
RFFL-211ENST00000584541 RIMS1Q86UR5 1692 aaKnown RBP26.95■■□□□ 1.9
RFFL-211ENST00000584541 DHX57Q6P158 1386 aaKnown RBP26.93■■□□□ 1.9
RFFL-211ENST00000584541 PKD2Q13563 968 aa26.92■■□□□ 1.9
RFFL-211ENST00000584541 CFAP65Q6ZU64 1925 aaKnown RBP26.9■■□□□ 1.9
RFFL-211ENST00000584541 RPRD2Q5VT52 1461 aaKnown RBP26.9■■□□□ 1.9
RFFL-211ENST00000584541 ARHGAP31Q2M1Z3 1444 aa26.9■■□□□ 1.9
RFFL-211ENST00000584541 ZMYM3Q14202 1370 aa26.87■■□□□ 1.89
RFFL-211ENST00000584541 C3P01024 1663 aa26.87■■□□□ 1.89
RFFL-211ENST00000584541 NPATQ14207 1427 aa26.86■■□□□ 1.89
RFFL-211ENST00000584541 SPHKAPQ2M3C7 1700 aa26.86■■□□□ 1.89
RFFL-211ENST00000584541 PREX1Q8TCU6 1659 aa26.84■■□□□ 1.89
RFFL-211ENST00000584541 CCER1Q8TC90 406 aaPredicted RBP26.83■■□□□ 1.89
RFFL-211ENST00000584541 FOXD1Q16676 465 aa26.82■■□□□ 1.88
RFFL-211ENST00000584541 ERVK-7P63135 1459 aa26.77■■□□□ 1.88
RFFL-211ENST00000584541 KDM4FA0A1W2PPD8 638 aa26.77■■□□□ 1.88
RFFL-211ENST00000584541 SPATA31D1Q6ZQQ2 1576 aa26.76■■□□□ 1.87
RFFL-211ENST00000584541 PTPRMP28827 1452 aa26.76■■□□□ 1.87
RFFL-211ENST00000584541 TRPM2O94759 1503 aa26.75■■□□□ 1.87
RFFL-211ENST00000584541 PTPRTO14522 1441 aa26.75■■□□□ 1.87
RFFL-211ENST00000584541 CEBPAP49715 358 aaPredicted RBP26.75■■□□□ 1.87
RFFL-211ENST00000584541 PLPPR3Q6T4P5 718 aa26.75■■□□□ 1.87
RFFL-211ENST00000584541 NOS1P29475 1434 aa26.74■■□□□ 1.87
RFFL-211ENST00000584541 ANKRD30BQ9BXX2 1392 aa26.74■■□□□ 1.87
RFFL-211ENST00000584541 CLSPNQ9HAW4 1339 aa26.74■■□□□ 1.87
RFFL-211ENST00000584541 FBXO31Q5XUX0 539 aaPredicted RBP26.73■■□□□ 1.87
RFFL-211ENST00000584541 SYNMO15061 1565 aa26.71■■□□□ 1.87
RFFL-211ENST00000584541 PLA2R1Q13018 1463 aa26.7■■□□□ 1.87
RFFL-211ENST00000584541 CCDC144AA2RUR9 1427 aa26.7■■□□□ 1.86
RFFL-211ENST00000584541 TNRQ92752 1358 aa26.69■■□□□ 1.86
RFFL-211ENST00000584541 CLTCL1P53675 1640 aa26.67■■□□□ 1.86
RFFL-211ENST00000584541 KIF1BO60333 1816 aa26.67■■□□□ 1.86
RFFL-211ENST00000584541 SETD1BQ9UPS6 1966 aaKnown RBP26.66■■□□□ 1.86
RFFL-211ENST00000584541 PIK3C2BO00750 1634 aa26.66■■□□□ 1.86
RFFL-211ENST00000584541 SLC52A1Q9NWF4 448 aa26.65■■□□□ 1.86
RFFL-211ENST00000584541 UGGT1Q9NYU2 1555 aa26.63■■□□□ 1.85
RFFL-211ENST00000584541 MYO3AQ8NEV4 1616 aa26.61■■□□□ 1.85
RFFL-211ENST00000584541 NLRP1Q9C000 1473 aa26.61■■□□□ 1.85
RFFL-211ENST00000584541 SIN3AQ96ST3 1273 aa26.59■■□□□ 1.85
RFFL-211ENST00000584541 NEUROD1Q13562 356 aa26.58■■□□□ 1.85
RFFL-211ENST00000584541 IDI1Q13907 227 aa26.58■■□□□ 1.85
RFFL-211ENST00000584541 KDM5AP29375 1690 aaKnown RBP26.56■■□□□ 1.84
RFFL-211ENST00000584541 STAG3Q9UJ98 1225 aa26.55■■□□□ 1.84
RFFL-211ENST00000584541 MYO5BQ9ULV0 1848 aa26.54■■□□□ 1.84
RFFL-211ENST00000584541 CHGAP10645 457 aaKnown RBP26.54■■□□□ 1.84
RFFL-211ENST00000584541 ADGRB3O60242 1522 aa26.54■■□□□ 1.84
RFFL-211ENST00000584541 ZNF142P52746 1687 aaPredicted RBP26.54■■□□□ 1.84
RFFL-211ENST00000584541 NEURL4Q96JN8 1562 aa26.53■■□□□ 1.84
RFFL-211ENST00000584541 TMEM131LA2VDJ0 1609 aa26.53■■□□□ 1.84
RFFL-211ENST00000584541 UBR1Q8IWV7 1749 aa26.52■■□□□ 1.84
RFFL-211ENST00000584541 CEP170BQ9Y4F5 1589 aaPredicted RBP26.52■■□□□ 1.84
RFFL-211ENST00000584541 A2ML1A8K2U0 1454 aa26.51■■□□□ 1.83
RFFL-211ENST00000584541 UHRF1BP1Q6BDS2 1440 aa26.51■■□□□ 1.83
RFFL-211ENST00000584541 TONSLQ96HA7 1378 aa26.48■■□□□ 1.83
RFFL-211ENST00000584541 SPATA31E1Q6ZUB1 1445 aa26.48■■□□□ 1.83
RFFL-211ENST00000584541 RGL3Q3MIN7 710 aa26.45■■□□□ 1.82
RFFL-211ENST00000584541 ZNF326Q5BKZ1 582 aaKnown RBP26.45■■□□□ 1.82
RFFL-211ENST00000584541 TIMELESSQ9UNS1 1208 aa26.43■■□□□ 1.82
RFFL-211ENST00000584541 THEMISQ8N1K5 641 aaPredicted RBP26.42■■□□□ 1.82
RFFL-211ENST00000584541 PPLO60437 1756 aa26.41■■□□□ 1.82
RFFL-211ENST00000584541 IFT172Q9UG01 1749 aa26.4■■□□□ 1.82
RFFL-211ENST00000584541 RPGRIP1LQ68CZ1 1315 aa26.39■■□□□ 1.82
RFFL-211ENST00000584541 HDGFP51858 240 aaKnown RBP26.36■■□□□ 1.81
RFFL-211ENST00000584541 L3MBTL2Q969R5 705 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms