RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 CCDC18Q5T9S5 1454 aa8.97□□□□□ -0.97
MSI2-219ENST00000584476 MAGI3Q5TCQ9 1506 aa8.97□□□□□ -0.97
MSI2-219ENST00000584476 L3MBTL3Q96JM7 780 aaPredicted RBP8.97□□□□□ -0.97
MSI2-219ENST00000584476 ST18O60284 1047 aa8.96□□□□□ -0.98
MSI2-219ENST00000584476 MTUS2Q5JR59 1369 aa8.96□□□□□ -0.98
MSI2-219ENST00000584476 SNPHO15079 494 aa8.95□□□□□ -0.98
MSI2-219ENST00000584476 ILDR1Q86SU0 546 aaPredicted RBP8.95□□□□□ -0.98
MSI2-219ENST00000584476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.95□□□□□ -0.982e-15■□□□□ 9.3
MSI2-219ENST00000584476 PHLDB1Q86UU1 1377 aa8.94□□□□□ -0.98
MSI2-219ENST00000584476 UACAQ9BZF9 1416 aa8.94□□□□□ -0.98
MSI2-219ENST00000584476 EHBP1L1Q8N3D4 1523 aa8.94□□□□□ -0.98
MSI2-219ENST00000584476 AMER1Q5JTC6 1135 aaPredicted RBP8.93□□□□□ -0.98
MSI2-219ENST00000584476 ATP10BO94823 1461 aa8.93□□□□□ -0.98
MSI2-219ENST00000584476 ABCC2Q92887 1545 aa8.91□□□□□ -0.98
MSI2-219ENST00000584476 NCOA2Q15596 1464 aa8.91□□□□□ -0.98
MSI2-219ENST00000584476 RRBP1Q9P2E9 1410 aaKnown RBP8.91□□□□□ -0.98
MSI2-219ENST00000584476 C3orf67Q6ZVT6 689 aa8.91□□□□□ -0.98
MSI2-219ENST00000584476 CDAN1Q8IWY9 1227 aa8.91□□□□□ -0.98
MSI2-219ENST00000584476 TMEM121BQ9BXQ6 578 aaPredicted RBP8.91□□□□□ -0.98
MSI2-219ENST00000584476 UHRF1BP1LA0JNW5 1464 aa8.89□□□□□ -0.99
MSI2-219ENST00000584476 CABP2Q9NPB3 220 aa8.89□□□□□ -0.99
MSI2-219ENST00000584476 CDK11AQ9UQ88 783 aaPredicted RBP8.89□□□□□ -0.99
MSI2-219ENST00000584476 ARHGEF11O15085 1522 aa8.89□□□□□ -0.99
MSI2-219ENST00000584476 TROQ12816 1431 aaPredicted RBP8.88□□□□□ -0.99
MSI2-219ENST00000584476 SUPT6HQ7KZ85 1726 aaKnown RBP8.88□□□□□ -0.99
MSI2-219ENST00000584476 CCNB3Q8WWL7 1395 aa8.88□□□□□ -0.99
MSI2-219ENST00000584476 PLEKHD1A6NEE1 506 aa8.88□□□□□ -0.99
MSI2-219ENST00000584476 MYOM3Q5VTT5 1437 aa8.87□□□□□ -0.99
MSI2-219ENST00000584476 ADCY10Q96PN6 1610 aa8.87□□□□□ -0.99
MSI2-219ENST00000584476 KDM5BQ9UGL1 1544 aa8.86□□□□□ -0.99
MSI2-219ENST00000584476 FAM50AQ14320 339 aaKnown RBP8.86□□□□□ -0.99
MSI2-219ENST00000584476 KIF14Q15058 1648 aa8.86□□□□□ -0.99
MSI2-219ENST00000584476 FGD6Q6ZV73 1430 aa8.86□□□□□ -0.99
MSI2-219ENST00000584476 ZCCHC11Q5TAX3 1644 aaKnown RBP8.85□□□□□ -0.99
MSI2-219ENST00000584476 ITGAEP38570 1179 aa8.84□□□□□ -0.99
MSI2-219ENST00000584476 ABCC10Q5T3U5 1492 aa8.83□□□□□ -1
MSI2-219ENST00000584476 DPY19L2Q6NUT2 758 aa8.83□□□□□ -1
MSI2-219ENST00000584476 RTN4Q9NQC3 1192 aaKnown RBP8.83□□□□□ -1
MSI2-219ENST00000584476 RIMBP3CA6NJZ7 1639 aa8.83□□□□□ -1
MSI2-219ENST00000584476 RIMBP3BA6NNM3 1639 aa8.83□□□□□ -1
MSI2-219ENST00000584476 RIMBP3Q9UFD9 1639 aa8.83□□□□□ -1
MSI2-219ENST00000584476 GPATCH8Q9UKJ3 1502 aaKnown RBP8.82□□□□□ -1
MSI2-219ENST00000584476 G3V3G9 751 aa8.82□□□□□ -1
MSI2-219ENST00000584476 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
MSI2-219ENST00000584476 CYB5RLQ6IPT4 315 aa8.81□□□□□ -1
MSI2-219ENST00000584476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.81□□□□□ -1
MSI2-219ENST00000584476 TCOF1Q13428 1488 aaKnown RBP8.81□□□□□ -1
MSI2-219ENST00000584476 ZNF644Q9H582 1327 aaPredicted RBP8.8□□□□□ -1
MSI2-219ENST00000584476 MIA2Q96PC5 1412 aa8.8□□□□□ -1
MSI2-219ENST00000584476 PTPN23Q9H3S7 1636 aa8.8□□□□□ -1
MSI2-219ENST00000584476 KCNH8Q96L42 1107 aa8.8□□□□□ -1
MSI2-219ENST00000584476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.79□□□□□ -1
MSI2-219ENST00000584476 PTPRKQ15262 1439 aa8.79□□□□□ -1
MSI2-219ENST00000584476 ASXL2Q76L83 1435 aa8.79□□□□□ -1
MSI2-219ENST00000584476 TTC37Q6PGP7 1564 aa8.78□□□□□ -1
MSI2-219ENST00000584476 WDR7Q9Y4E6 1490 aa8.78□□□□□ -1
MSI2-219ENST00000584476 RIOK3O14730 519 aaKnown RBP8.78□□□□□ -1
MSI2-219ENST00000584476 EFCAB3Q8N7B9 438 aa8.78□□□□□ -1
MSI2-219ENST00000584476 MARVELD3Q96A59 401 aa8.78□□□□□ -1
MSI2-219ENST00000584476 CFDP1Q9UEE9 299 aaPredicted RBP8.78□□□□□ -1
MSI2-219ENST00000584476 ZNF777Q9ULD5 760 aaPredicted RBP8.77□□□□□ -1.01
MSI2-219ENST00000584476 ITSN2Q9NZM3 1697 aa8.77□□□□□ -1.01
MSI2-219ENST00000584476 CDC42BPAQ5VT25 1732 aa8.77□□□□□ -1.01
MSI2-219ENST00000584476 CAMSAP2Q08AD1 1489 aa8.77□□□□□ -1.01
MSI2-219ENST00000584476 SOX12O15370 315 aa8.75□□□□□ -1.01
MSI2-219ENST00000584476 RNF25Q96BH1 459 aaPredicted RBP8.75□□□□□ -1.01
MSI2-219ENST00000584476 ABCC5O15440 1437 aa8.74□□□□□ -1.01
MSI2-219ENST00000584476 PREX2Q70Z35 1606 aa8.74□□□□□ -1.01
MSI2-219ENST00000584476 VGFO15240 615 aaPredicted RBP8.74□□□□□ -1.01
MSI2-219ENST00000584476 EMP3P54852 163 aa8.74□□□□□ -1.01
MSI2-219ENST00000584476 PLCH2O75038 1416 aa8.73□□□□□ -1.01
MSI2-219ENST00000584476 DAPK1P53355 1430 aa8.73□□□□□ -1.01
MSI2-219ENST00000584476 CHIC2Q9UKJ5 165 aa8.73□□□□□ -1.01
MSI2-219ENST00000584476 CDC42BPBQ9Y5S2 1711 aa8.73□□□□□ -1.01
MSI2-219ENST00000584476 ARHGAP5Q13017 1502 aa8.73□□□□□ -1.01
MSI2-219ENST00000584476 SAMD9LQ8IVG5 1584 aa8.73□□□□□ -1.01
MSI2-219ENST00000584476 DNMT1P26358 1616 aaKnown RBP8.72□□□□□ -1.01
MSI2-219ENST00000584476 SETD5Q9C0A6 1442 aa8.72□□□□□ -1.01
MSI2-219ENST00000584476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.72□□□□□ -1.01
MSI2-219ENST00000584476 HRCP23327 699 aa8.72□□□□□ -1.01
MSI2-219ENST00000584476 ZFP91Q96JP5 570 aaPredicted RBP8.72□□□□□ -1.01
MSI2-219ENST00000584476 ABCA9Q8IUA7 1624 aa8.72□□□□□ -1.01
MSI2-219ENST00000584476 RAB3GAP2Q9H2M9 1393 aa8.72□□□□□ -1.01
MSI2-219ENST00000584476 MYO5CQ9NQX4 1742 aa8.71□□□□□ -1.01
MSI2-219ENST00000584476 MAPKBP1O60336 1514 aa8.71□□□□□ -1.01
MSI2-219ENST00000584476 HOXB3P14651 431 aaPredicted RBP8.71□□□□□ -1.02
MSI2-219ENST00000584476 HNRNPMP52272 730 aaKnown RBP eCLIP8.71□□□□□ -1.02
MSI2-219ENST00000584476 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.02
MSI2-219ENST00000584476 RRP7BPQ9NSQ0 103 aa8.71□□□□□ -1.02
MSI2-219ENST00000584476 HFM1A2PYH4 1435 aa8.71□□□□□ -1.02
MSI2-219ENST00000584476 MBD5Q9P267 1494 aa8.7□□□□□ -1.02
MSI2-219ENST00000584476 EFCAB2Q5VUJ9 269 aa8.7□□□□□ -1.02
MSI2-219ENST00000584476 SPNS2Q8IVW8 549 aa8.7□□□□□ -1.02
MSI2-219ENST00000584476 NAIPQ13075 1403 aa8.7□□□□□ -1.02
MSI2-219ENST00000584476 AKNAQ7Z591 1439 aa8.7□□□□□ -1.02
MSI2-219ENST00000584476 TAOK2Q9UL54 1235 aa8.69□□□□□ -1.02
MSI2-219ENST00000584476 SYCP2Q9BX26 1530 aa8.69□□□□□ -1.02
MSI2-219ENST00000584476 ARHGEF12Q9NZN5 1544 aa8.69□□□□□ -1.02
MSI2-219ENST00000584476 DOK7Q18PE1 504 aa8.68□□□□□ -1.02
MSI2-219ENST00000584476 MICALL2Q8IY33 904 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms