RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 ZMYM3Q14202 1370 aa24.41■■□□□ 1.5
CSNK1D-223ENST00000584472 DUOX2Q9NRD8 1548 aa24.4■■□□□ 1.5
CSNK1D-223ENST00000584472 EIF2AK4Q9P2K8 1649 aaKnown RBP24.39■■□□□ 1.49
CSNK1D-223ENST00000584472 ADGRL2O95490 1459 aa24.38■■□□□ 1.49
CSNK1D-223ENST00000584472 KIF15Q9NS87 1388 aa24.37■■□□□ 1.49
CSNK1D-223ENST00000584472 DMRT2Q9Y5R5 561 aa24.36■■□□□ 1.49
CSNK1D-223ENST00000584472 ANKRD30AQ9BXX3 1397 aa24.36■■□□□ 1.49
CSNK1D-223ENST00000584472 CLTCQ00610 1675 aaKnown RBP24.35■■□□□ 1.49
CSNK1D-223ENST00000584472 RNF17Q9BXT8 1623 aaKnown RBP24.34■■□□□ 1.49
CSNK1D-223ENST00000584472 NCOA1Q15788 1441 aa24.34■■□□□ 1.49
CSNK1D-223ENST00000584472 ERBINQ96RT1 1412 aa24.33■■□□□ 1.49
CSNK1D-223ENST00000584472 STRCQ7RTU9 1775 aa24.32■■□□□ 1.48
CSNK1D-223ENST00000584472 KIF3BO15066 747 aa24.32■■□□□ 1.48
CSNK1D-223ENST00000584472 GGT6Q6P531 493 aa24.32■■□□□ 1.48
CSNK1D-223ENST00000584472 PTPRKQ15262 1439 aa24.32■■□□□ 1.48
CSNK1D-223ENST00000584472 FBXO41Q8TF61 875 aa24.31■■□□□ 1.48
CSNK1D-223ENST00000584472 CHIC2Q9UKJ5 165 aa24.3■■□□□ 1.48
CSNK1D-223ENST00000584472 RRP7BPQ9NSQ0 103 aa24.29■■□□□ 1.48
CSNK1D-223ENST00000584472 ZNF142P52746 1687 aaPredicted RBP24.29■■□□□ 1.48
CSNK1D-223ENST00000584472 KDM5DQ9BY66 1539 aa24.29■■□□□ 1.48
CSNK1D-223ENST00000584472 PTPRTO14522 1441 aa24.28■■□□□ 1.48
CSNK1D-223ENST00000584472 ROCK1Q13464 1354 aa24.27■■□□□ 1.48
CSNK1D-223ENST00000584472 MYO3AQ8NEV4 1616 aa24.25■■□□□ 1.47
CSNK1D-223ENST00000584472 MROH1Q8NDA8 1641 aa24.24■■□□□ 1.47
CSNK1D-223ENST00000584472 PLA2R1Q13018 1463 aa24.24■■□□□ 1.47
CSNK1D-223ENST00000584472 PZPP20742 1482 aa24.23■■□□□ 1.47
CSNK1D-223ENST00000584472 DEPDC5O75140 1603 aa24.23■■□□□ 1.47
CSNK1D-223ENST00000584472 ZC3H13Q5T200 1668 aaKnown RBP24.23■■□□□ 1.47
CSNK1D-223ENST00000584472 PRDM15P57071 1507 aaPredicted RBP24.22■■□□□ 1.47
CSNK1D-223ENST00000584472 CEP170BQ9Y4F5 1589 aaPredicted RBP24.21■■□□□ 1.47
CSNK1D-223ENST00000584472 ANKRD50Q9ULJ7 1429 aa24.18■■□□□ 1.46
CSNK1D-223ENST00000584472 CAMSAP1Q5T5Y3 1602 aa24.18■■□□□ 1.46
CSNK1D-223ENST00000584472 WASHC2CQ9Y4E1 1318 aa24.18■■□□□ 1.46
CSNK1D-223ENST00000584472 ABCC3O15438 1527 aa24.18■■□□□ 1.46
CSNK1D-223ENST00000584472 A2ML1A8K2U0 1454 aa24.17■■□□□ 1.46
CSNK1D-223ENST00000584472 ITGAEP38570 1179 aa24.16■■□□□ 1.46
CSNK1D-223ENST00000584472 CERKQ8TCT0 537 aa24.16■■□□□ 1.46
CSNK1D-223ENST00000584472 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
CSNK1D-223ENST00000584472 PKD2Q13563 968 aa24.13■■□□□ 1.45
CSNK1D-223ENST00000584472 KANK1Q14678 1352 aa24.12■■□□□ 1.45
CSNK1D-223ENST00000584472 TNRQ92752 1358 aa24.12■■□□□ 1.45
CSNK1D-223ENST00000584472 CEP152O94986 1710 aa24.12■■□□□ 1.45
CSNK1D-223ENST00000584472 NLRP1Q9C000 1473 aa24.12■■□□□ 1.45
CSNK1D-223ENST00000584472 VWDEQ8N2E2 1590 aa24.12■■□□□ 1.45
CSNK1D-223ENST00000584472 UNC13BO14795 1591 aa24.08■■□□□ 1.45
CSNK1D-223ENST00000584472 IQSEC2Q5JU85 1478 aa24.08■■□□□ 1.45
CSNK1D-223ENST00000584472 LMTK2Q8IWU2 1503 aa24.08■■□□□ 1.45
CSNK1D-223ENST00000584472 GCC2Q8IWJ2 1684 aa24.07■■□□□ 1.44
CSNK1D-223ENST00000584472 SPATA31D1Q6ZQQ2 1576 aa24.07■■□□□ 1.44
CSNK1D-223ENST00000584472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.06■■□□□ 1.448e-9■□□□□ 9
CSNK1D-223ENST00000584472 ARHGAP31Q2M1Z3 1444 aa24.06■■□□□ 1.44
CSNK1D-223ENST00000584472 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
CSNK1D-223ENST00000584472 FBXO31Q5XUX0 539 aaPredicted RBP24.04■■□□□ 1.44
CSNK1D-223ENST00000584472 HFM1A2PYH4 1435 aa24.03■■□□□ 1.44
CSNK1D-223ENST00000584472 NAIPQ13075 1403 aa24.03■■□□□ 1.44
CSNK1D-223ENST00000584472 EFCAB6Q5THR3 1501 aa24■■□□□ 1.43
CSNK1D-223ENST00000584472 ERVK-7P63135 1459 aa24■■□□□ 1.43
CSNK1D-223ENST00000584472 NCKAP5LQ9HCH0 1330 aa23.99■■□□□ 1.43
CSNK1D-223ENST00000584472 UGGT1Q9NYU2 1555 aa23.99■■□□□ 1.43
CSNK1D-223ENST00000584472 IQGAP3Q86VI3 1631 aa23.99■■□□□ 1.43
CSNK1D-223ENST00000584472 POLR1AO95602 1720 aaPredicted RBP23.98■■□□□ 1.43
CSNK1D-223ENST00000584472 THEMISQ8N1K5 641 aaPredicted RBP23.98■■□□□ 1.43
CSNK1D-223ENST00000584472 TET3O43151 1660 aa23.98■■□□□ 1.43
CSNK1D-223ENST00000584472 NEURL4Q96JN8 1562 aa23.95■■□□□ 1.42
CSNK1D-223ENST00000584472 MED14O60244 1454 aa23.94■■□□□ 1.42
CSNK1D-223ENST00000584472 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
CSNK1D-223ENST00000584472 CFAP65Q6ZU64 1925 aaKnown RBP23.92■■□□□ 1.42
CSNK1D-223ENST00000584472 NUP155O75694 1391 aa23.91■■□□□ 1.42
CSNK1D-223ENST00000584472 ANKLE2Q86XL3 938 aa23.91■■□□□ 1.42
CSNK1D-223ENST00000584472 PCGF6Q9BYE7 350 aa23.9■■□□□ 1.42
CSNK1D-223ENST00000584472 NOS1P29475 1434 aa23.87■■□□□ 1.41
CSNK1D-223ENST00000584472 ZNF335Q9H4Z2 1342 aaPredicted RBP23.86■■□□□ 1.41
CSNK1D-223ENST00000584472 E9PCH4 1651 aa23.86■■□□□ 1.41
CSNK1D-223ENST00000584472 KDM5AP29375 1690 aaKnown RBP23.86■■□□□ 1.41
CSNK1D-223ENST00000584472 SETD5Q9C0A6 1442 aa23.85■■□□□ 1.41
CSNK1D-223ENST00000584472 CPS1P31327 1500 aa23.85■■□□□ 1.41
CSNK1D-223ENST00000584472 UBR1Q8IWV7 1749 aa23.85■■□□□ 1.41
CSNK1D-223ENST00000584472 SYNMO15061 1565 aa23.85■■□□□ 1.41
CSNK1D-223ENST00000584472 SLIT1O75093 1534 aa23.84■■□□□ 1.41
CSNK1D-223ENST00000584472 NPHP4O75161 1426 aaPredicted RBP23.84■■□□□ 1.41
CSNK1D-223ENST00000584472 ARHGAP23Q9P227 1491 aa23.82■■□□□ 1.4
CSNK1D-223ENST00000584472 IQGAP1P46940 1657 aa23.81■■□□□ 1.4
CSNK1D-223ENST00000584472 ACIN1Q9UKV3 1341 aaKnown RBP23.8■■□□□ 1.4
CSNK1D-223ENST00000584472 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
CSNK1D-223ENST00000584472 PIK3C2BO00750 1634 aa23.78■■□□□ 1.4
CSNK1D-223ENST00000584472 SCAF11Q99590 1463 aaKnown RBP23.77■■□□□ 1.4
CSNK1D-223ENST00000584472 SLC52A1Q9NWF4 448 aa23.77■■□□□ 1.4
CSNK1D-223ENST00000584472 TRIM52Q96A61 297 aa23.75■■□□□ 1.39
CSNK1D-223ENST00000584472 SPHKAPQ2M3C7 1700 aa23.73■■□□□ 1.39
CSNK1D-223ENST00000584472 HRCP23327 699 aa23.73■■□□□ 1.39
CSNK1D-223ENST00000584472 IDI1Q13907 227 aa23.73■■□□□ 1.39
CSNK1D-223ENST00000584472 ADGRB3O60242 1522 aa23.73■■□□□ 1.39
CSNK1D-223ENST00000584472 TMEM2Q9UHN6 1383 aa23.72■■□□□ 1.39
CSNK1D-223ENST00000584472 EID1Q9Y6B2 187 aa23.69■■□□□ 1.38
CSNK1D-223ENST00000584472 SLC4A1APQ9BWU0 796 aaKnown RBP23.68■■□□□ 1.38
CSNK1D-223ENST00000584472 STAG3Q9UJ98 1225 aa23.67■■□□□ 1.38
CSNK1D-223ENST00000584472 TRPM2O94759 1503 aa23.67■■□□□ 1.38
CSNK1D-223ENST00000584472 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
CSNK1D-223ENST00000584472 TMEM131LA2VDJ0 1609 aa23.66■■□□□ 1.38
CSNK1D-223ENST00000584472 UBAP1LF5GYI3 381 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms