RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 UTP14CQ5TAP6 766 aaKnown RBP12.92□□□□□ -0.34
CDH8-211ENST00000584337 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
CDH8-211ENST00000584337 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
CDH8-211ENST00000584337 EIF4G1Q04637 1599 aaKnown RBP12.92□□□□□ -0.34
CDH8-211ENST00000584337 NCOA2Q15596 1464 aa12.92□□□□□ -0.34
CDH8-211ENST00000584337 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
CDH8-211ENST00000584337 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
CDH8-211ENST00000584337 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
CDH8-211ENST00000584337 ROCK2O75116 1388 aaKnown RBP12.91□□□□□ -0.34
CDH8-211ENST00000584337 MTUS2Q5JR59 1369 aa12.91□□□□□ -0.34
CDH8-211ENST00000584337 CCDC94Q9BW85 323 aaPredicted RBP12.91□□□□□ -0.34
CDH8-211ENST00000584337 DDX49Q9Y6V7 483 aaKnown RBP12.91□□□□□ -0.34
CDH8-211ENST00000584337 CBX1P83916 185 aa12.91□□□□□ -0.34
CDH8-211ENST00000584337 DMTNQ08495 405 aa12.9□□□□□ -0.34
CDH8-211ENST00000584337 TBC1D2Q9BYX2 928 aa12.9□□□□□ -0.34
CDH8-211ENST00000584337 MAP3K1Q13233 1512 aa12.9□□□□□ -0.34
CDH8-211ENST00000584337 ERBB4Q15303 1308 aa12.9□□□□□ -0.35
CDH8-211ENST00000584337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
CDH8-211ENST00000584337 MFAP1P55081 439 aaKnown RBP12.89□□□□□ -0.35
CDH8-211ENST00000584337 XPCQ01831 940 aaPredicted RBP12.89□□□□□ -0.35
CDH8-211ENST00000584337 KIAA2012Q0VF49 1180 aa12.89□□□□□ -0.35
CDH8-211ENST00000584337 CHAF1AQ13111 956 aaPredicted RBP12.89□□□□□ -0.35
CDH8-211ENST00000584337 SASS6Q6UVJ0 657 aa12.89□□□□□ -0.35
CDH8-211ENST00000584337 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
CDH8-211ENST00000584337 C20orf194Q5TEA3 1177 aa12.88□□□□□ -0.35
CDH8-211ENST00000584337 MPHOSPH9Q99550 1183 aa12.88□□□□□ -0.35
CDH8-211ENST00000584337 CGNQ9P2M7 1197 aaKnown RBP12.88□□□□□ -0.35
CDH8-211ENST00000584337 VGLL3A8MV65 326 aa12.88□□□□□ -0.35
CDH8-211ENST00000584337 FOXD1Q16676 465 aa12.88□□□□□ -0.35
CDH8-211ENST00000584337 GTF2E1P29083 439 aaPredicted RBP12.87□□□□□ -0.35
CDH8-211ENST00000584337 RIPK4P57078 832 aa12.87□□□□□ -0.35
CDH8-211ENST00000584337 KDM2AQ9Y2K7 1162 aa12.87□□□□□ -0.35
CDH8-211ENST00000584337 LRRC9Q6ZRR7 1453 aa12.87□□□□□ -0.35
CDH8-211ENST00000584337 CARD11Q9BXL7 1154 aa12.86□□□□□ -0.35
CDH8-211ENST00000584337 PLPPR3Q6T4P5 718 aa12.86□□□□□ -0.35
CDH8-211ENST00000584337 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
CDH8-211ENST00000584337 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
CDH8-211ENST00000584337 HMGN5P82970 282 aaKnown RBP12.85□□□□□ -0.35
CDH8-211ENST00000584337 MAPK8IP2Q13387 824 aaPredicted RBP12.85□□□□□ -0.35
CDH8-211ENST00000584337 TNNT3P45378 269 aaPredicted RBP12.85□□□□□ -0.35
CDH8-211ENST00000584337 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
CDH8-211ENST00000584337 KDM2BQ8NHM5 1336 aa12.84□□□□□ -0.35
CDH8-211ENST00000584337 PMFBP1Q8TBY8 1022 aa12.84□□□□□ -0.35
CDH8-211ENST00000584337 C22orf23Q9BZE7 217 aa12.84□□□□□ -0.35
CDH8-211ENST00000584337 CCDC39Q9UFE4 941 aa12.84□□□□□ -0.35
CDH8-211ENST00000584337 SMARCA4P51532 1647 aa12.83□□□□□ -0.36
CDH8-211ENST00000584337 CCDC66A2RUB6 948 aa12.83□□□□□ -0.36
CDH8-211ENST00000584337 CC2D1BQ5T0F9 858 aaKnown RBP12.83□□□□□ -0.36
CDH8-211ENST00000584337 CGNL1Q0VF96 1302 aa12.82□□□□□ -0.36
CDH8-211ENST00000584337 NBPF8Q3BBV2 869 aa12.82□□□□□ -0.36
CDH8-211ENST00000584337 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
CDH8-211ENST00000584337 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
CDH8-211ENST00000584337 HS1BP3Q53T59 392 aa12.81□□□□□ -0.36
CDH8-211ENST00000584337 USP47Q96K76 1375 aa12.81□□□□□ -0.36
CDH8-211ENST00000584337 TBC1D32Q96NH3 1257 aa12.8□□□□□ -0.36
CDH8-211ENST00000584337 ANTXR1Q9H6X2 564 aa12.8□□□□□ -0.36
CDH8-211ENST00000584337 FTSJ3Q8IY81 847 aaKnown RBP12.8□□□□□ -0.36
CDH8-211ENST00000584337 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
CDH8-211ENST00000584337 MCM5P33992 734 aa12.8□□□□□ -0.36
CDH8-211ENST00000584337 SEC24BO95487 1268 aa12.79□□□□□ -0.36
CDH8-211ENST00000584337 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
CDH8-211ENST00000584337 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
CDH8-211ENST00000584337 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
CDH8-211ENST00000584337 PPP1R9BQ96SB3 815 aa12.78□□□□□ -0.36
CDH8-211ENST00000584337 HFM1A2PYH4 1435 aa12.78□□□□□ -0.36
CDH8-211ENST00000584337 PDCL2Q8N4E4 241 aa12.78□□□□□ -0.36
CDH8-211ENST00000584337 KCNJ4P48050 445 aa12.77□□□□□ -0.36
CDH8-211ENST00000584337 KIF3AQ9Y496 699 aa12.77□□□□□ -0.36
CDH8-211ENST00000584337 EIF3AQ14152 1382 aaKnown RBP12.77□□□□□ -0.36
CDH8-211ENST00000584337 TIAM1Q13009 1591 aa12.77□□□□□ -0.37
CDH8-211ENST00000584337 E9PSI1 815 aa12.77□□□□□ -0.37
CDH8-211ENST00000584337 TNPO1Q92973 898 aaKnown RBP12.77□□□□□ -0.37
CDH8-211ENST00000584337 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
CDH8-211ENST00000584337 CHMP4AQ9BY43 222 aa12.77□□□□□ -0.37
CDH8-211ENST00000584337 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
CDH8-211ENST00000584337 ZKSCAN5Q9Y2L8 839 aa12.77□□□□□ -0.37
CDH8-211ENST00000584337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDH8-211ENST00000584337 PRXQ9BXM0 1461 aa12.76□□□□□ -0.37
CDH8-211ENST00000584337 COG6Q9Y2V7 657 aa12.76□□□□□ -0.37
CDH8-211ENST00000584337 GAS2L3Q86XJ1 694 aa12.76□□□□□ -0.37
CDH8-211ENST00000584337 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
CDH8-211ENST00000584337 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
CDH8-211ENST00000584337 DNAJC2Q99543 621 aaKnown RBP12.75□□□□□ -0.37
CDH8-211ENST00000584337 FGD6Q6ZV73 1430 aa12.75□□□□□ -0.37
CDH8-211ENST00000584337 ZNF500O60304 480 aaPredicted RBP12.74□□□□□ -0.37
CDH8-211ENST00000584337 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
CDH8-211ENST00000584337 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
CDH8-211ENST00000584337 APPP05067 770 aa12.74□□□□□ -0.37
CDH8-211ENST00000584337 ZSCAN20P17040 1043 aaPredicted RBP12.74□□□□□ -0.37
CDH8-211ENST00000584337 DIAPH3Q9NSV4 1193 aa12.74□□□□□ -0.37
CDH8-211ENST00000584337 IGSF3O75054 1194 aa12.73□□□□□ -0.37
CDH8-211ENST00000584337 PLCB2Q00722 1185 aa12.73□□□□□ -0.37
CDH8-211ENST00000584337 AEBP1Q8IUX7 1158 aa12.73□□□□□ -0.37
CDH8-211ENST00000584337 LRPPRCP42704 1394 aaKnown RBP12.73□□□□□ -0.37
CDH8-211ENST00000584337 RGL3Q3MIN7 710 aa12.73□□□□□ -0.37
CDH8-211ENST00000584337 PRIMPOLQ96LW4 560 aa12.73□□□□□ -0.37
CDH8-211ENST00000584337 AEBP2Q6ZN18 517 aaPredicted RBP12.72□□□□□ -0.37
CDH8-211ENST00000584337 MCTP1Q6DN14 999 aa12.71□□□□□ -0.37
CDH8-211ENST00000584337 TSPY4P0CV99 314 aa12.71□□□□□ -0.37
CDH8-211ENST00000584337 TSPY10P0CW01 314 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms