RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
CASC3-209ENST00000583902 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
CASC3-209ENST00000583902 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
CASC3-209ENST00000583902 RRP7BPQ9NSQ0 103 aa13.63□□□□□ -0.23
CASC3-209ENST00000583902 DHX29Q7Z478 1369 aaKnown RBP13.61□□□□□ -0.23
CASC3-209ENST00000583902 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
CASC3-209ENST00000583902 REREQ9P2R6 1566 aa13.61□□□□□ -0.23
CASC3-209ENST00000583902 BCORL1Q5H9F3 1711 aa13.61□□□□□ -0.23
CASC3-209ENST00000583902 FRMPD1Q5SYB0 1578 aa13.6□□□□□ -0.23
CASC3-209ENST00000583902 MYT1LQ9UL68 1186 aa13.59□□□□□ -0.23
CASC3-209ENST00000583902 RAPGEF3O95398 923 aa13.58□□□□□ -0.24
CASC3-209ENST00000583902 A2MP01023 1474 aa13.58□□□□□ -0.24
CASC3-209ENST00000583902 KDM5DQ9BY66 1539 aa13.58□□□□□ -0.24
CASC3-209ENST00000583902 UNC13BO14795 1591 aa13.57□□□□□ -0.24
CASC3-209ENST00000583902 ATP10AO60312 1499 aa13.56□□□□□ -0.24
CASC3-209ENST00000583902 FAM135AQ9P2D6 1515 aa13.56□□□□□ -0.24
CASC3-209ENST00000583902 ZEB1P37275 1124 aaPredicted RBP13.56□□□□□ -0.24
CASC3-209ENST00000583902 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
CASC3-209ENST00000583902 KDM6BO15054 1643 aa13.56□□□□□ -0.24
CASC3-209ENST00000583902 AGLP35573 1532 aa13.55□□□□□ -0.24
CASC3-209ENST00000583902 DIP2CQ9Y2E4 1556 aa13.55□□□□□ -0.24
CASC3-209ENST00000583902 DEPDC5O75140 1603 aa13.55□□□□□ -0.24
CASC3-209ENST00000583902 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
CASC3-209ENST00000583902 ABCA6Q8N139 1617 aa13.54□□□□□ -0.24
CASC3-209ENST00000583902 KANK1Q14678 1352 aa13.54□□□□□ -0.24
CASC3-209ENST00000583902 RNF17Q9BXT8 1623 aaKnown RBP13.53□□□□□ -0.24
CASC3-209ENST00000583902 CCER1Q8TC90 406 aaPredicted RBP13.53□□□□□ -0.24
CASC3-209ENST00000583902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.24
CASC3-209ENST00000583902 DHX57Q6P158 1386 aaKnown RBP13.53□□□□□ -0.24
CASC3-209ENST00000583902 COL17A1Q9UMD9 1497 aaPredicted RBP13.52□□□□□ -0.25
CASC3-209ENST00000583902 IQGAP3Q86VI3 1631 aa13.51□□□□□ -0.25
CASC3-209ENST00000583902 NUP155O75694 1391 aa13.51□□□□□ -0.25
CASC3-209ENST00000583902 C1QBPQ07021 282 aaKnown RBP13.51□□□□□ -0.25
CASC3-209ENST00000583902 TRIM52Q96A61 297 aa13.51□□□□□ -0.25
CASC3-209ENST00000583902 PRDM15P57071 1507 aaPredicted RBP13.5□□□□□ -0.25
CASC3-209ENST00000583902 MPHOSPH9Q99550 1183 aa13.49□□□□□ -0.25
CASC3-209ENST00000583902 VWDEQ8N2E2 1590 aa13.49□□□□□ -0.25
CASC3-209ENST00000583902 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
CASC3-209ENST00000583902 KIF3BO15066 747 aa13.48□□□□□ -0.25
CASC3-209ENST00000583902 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
CASC3-209ENST00000583902 LMTK2Q8IWU2 1503 aa13.48□□□□□ -0.25
CASC3-209ENST00000583902 YEATS2Q9ULM3 1422 aa13.47□□□□□ -0.25
CASC3-209ENST00000583902 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
CASC3-209ENST00000583902 PZPP20742 1482 aa13.46□□□□□ -0.25
CASC3-209ENST00000583902 TET3O43151 1660 aa13.46□□□□□ -0.26
CASC3-209ENST00000583902 RPRD2Q5VT52 1461 aaKnown RBP13.45□□□□□ -0.26
CASC3-209ENST00000583902 MROH1Q8NDA8 1641 aa13.43□□□□□ -0.26
CASC3-209ENST00000583902 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
CASC3-209ENST00000583902 CNTLNQ9NXG0 1405 aa13.4□□□□□ -0.26
CASC3-209ENST00000583902 PKD2Q13563 968 aa13.4□□□□□ -0.26
CASC3-209ENST00000583902 ANKRD30BQ9BXX2 1392 aa13.4□□□□□ -0.26
CASC3-209ENST00000583902 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
CASC3-209ENST00000583902 ABCC3O15438 1527 aa13.39□□□□□ -0.27
CASC3-209ENST00000583902 EFCAB6Q5THR3 1501 aa13.39□□□□□ -0.27
CASC3-209ENST00000583902 GGT6Q6P531 493 aa13.37□□□□□ -0.27
CASC3-209ENST00000583902 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
CASC3-209ENST00000583902 MROH2AA6NES4 1674 aa13.36□□□□□ -0.27
CASC3-209ENST00000583902 E9PCH4 1651 aa13.36□□□□□ -0.27
CASC3-209ENST00000583902 PTPRTO14522 1441 aa13.36□□□□□ -0.27
CASC3-209ENST00000583902 CAMSAP1Q5T5Y3 1602 aa13.35□□□□□ -0.27
CASC3-209ENST00000583902 NEURL4Q96JN8 1562 aa13.35□□□□□ -0.27
CASC3-209ENST00000583902 CEP152O94986 1710 aa13.35□□□□□ -0.27
CASC3-209ENST00000583902 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
CASC3-209ENST00000583902 STAC3Q96MF2 364 aa13.34□□□□□ -0.27
CASC3-209ENST00000583902 TRPM2O94759 1503 aa13.34□□□□□ -0.27
CASC3-209ENST00000583902 CCDC144AA2RUR9 1427 aa13.33□□□□□ -0.28
CASC3-209ENST00000583902 ARID4BQ4LE39 1312 aaPredicted RBP13.33□□□□□ -0.28
CASC3-209ENST00000583902 NPATQ14207 1427 aa13.3□□□□□ -0.28
CASC3-209ENST00000583902 SLC52A1Q9NWF4 448 aa13.3□□□□□ -0.28
CASC3-209ENST00000583902 TONSLQ96HA7 1378 aa13.3□□□□□ -0.28
CASC3-209ENST00000583902 SIGLEC1Q9BZZ2 1709 aa13.3□□□□□ -0.28
CASC3-209ENST00000583902 NOS1P29475 1434 aa13.29□□□□□ -0.28
CASC3-209ENST00000583902 CLTCQ00610 1675 aaKnown RBP13.28□□□□□ -0.28
CASC3-209ENST00000583902 FER1L4A9Z1Z3 1794 aa13.27□□□□□ -0.28
CASC3-209ENST00000583902 PLA2R1Q13018 1463 aa13.27□□□□□ -0.29
CASC3-209ENST00000583902 KIF1BO60333 1816 aa13.27□□□□□ -0.29
CASC3-209ENST00000583902 ZMYM3Q14202 1370 aa13.26□□□□□ -0.29
CASC3-209ENST00000583902 SPATA31D1Q6ZQQ2 1576 aa13.26□□□□□ -0.29
CASC3-209ENST00000583902 PREX1Q8TCU6 1659 aa13.26□□□□□ -0.29
CASC3-209ENST00000583902 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
CASC3-209ENST00000583902 SETD1BQ9UPS6 1966 aaKnown RBP13.24□□□□□ -0.29
CASC3-209ENST00000583902 NEUROD1Q13562 356 aa13.24□□□□□ -0.29
CASC3-209ENST00000583902 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
CASC3-209ENST00000583902 KDM5AP29375 1690 aaKnown RBP13.24□□□□□ -0.29
CASC3-209ENST00000583902 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
CASC3-209ENST00000583902 ERVK-7P63135 1459 aa13.23□□□□□ -0.29
CASC3-209ENST00000583902 CFAP65Q6ZU64 1925 aaKnown RBP13.23□□□□□ -0.29
CASC3-209ENST00000583902 RPGRIP1LQ68CZ1 1315 aa13.22□□□□□ -0.29
CASC3-209ENST00000583902 MLECQ14165 292 aa13.22□□□□□ -0.29
CASC3-209ENST00000583902 SPATA31E1Q6ZUB1 1445 aa13.21□□□□□ -0.3
CASC3-209ENST00000583902 CLTCL1P53675 1640 aa13.21□□□□□ -0.3
CASC3-209ENST00000583902 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
CASC3-209ENST00000583902 NLRP1Q9C000 1473 aa13.2□□□□□ -0.3
CASC3-209ENST00000583902 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
CASC3-209ENST00000583902 SYNMO15061 1565 aa13.19□□□□□ -0.3
CASC3-209ENST00000583902 C3P01024 1663 aa13.18□□□□□ -0.3
CASC3-209ENST00000583902 UHRF1BP1Q6BDS2 1440 aa13.18□□□□□ -0.3
CASC3-209ENST00000583902 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
CASC3-209ENST00000583902 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
CASC3-209ENST00000583902 ADGRB3O60242 1522 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms