RNA–Protein interactions for RNA: ENST00000583842.1

CCDC84-210, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-210ENST00000583842 PKD2Q13563 968 aa17.16■□□□□ 0.34
CCDC84-210ENST00000583842 PTPN23Q9H3S7 1636 aa17.16■□□□□ 0.34
CCDC84-210ENST00000583842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC84-210ENST00000583842 PTPRTO14522 1441 aa17.15■□□□□ 0.34
CCDC84-210ENST00000583842 NCOA1Q15788 1441 aa17.15■□□□□ 0.34
CCDC84-210ENST00000583842 RRP7BPQ9NSQ0 103 aa17.15■□□□□ 0.34
CCDC84-210ENST00000583842 ERBINQ96RT1 1412 aa17.14■□□□□ 0.33
CCDC84-210ENST00000583842 KIF15Q9NS87 1388 aa17.14■□□□□ 0.33
CCDC84-210ENST00000583842 PZPP20742 1482 aa17.13■□□□□ 0.33
CCDC84-210ENST00000583842 FBXO41Q8TF61 875 aa17.13■□□□□ 0.33
CCDC84-210ENST00000583842 KDM5DQ9BY66 1539 aa17.12■□□□□ 0.33
CCDC84-210ENST00000583842 ILDR1Q86SU0 546 aaPredicted RBP17.12■□□□□ 0.33
CCDC84-210ENST00000583842 EIF2AK4Q9P2K8 1649 aaKnown RBP17.11■□□□□ 0.33
CCDC84-210ENST00000583842 FBXO31Q5XUX0 539 aaPredicted RBP17.11■□□□□ 0.33
CCDC84-210ENST00000583842 THEMISQ8N1K5 641 aaPredicted RBP17.11■□□□□ 0.33
CCDC84-210ENST00000583842 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
CCDC84-210ENST00000583842 ARHGAP31Q2M1Z3 1444 aa17.1■□□□□ 0.33
CCDC84-210ENST00000583842 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
CCDC84-210ENST00000583842 DNMT1P26358 1616 aaKnown RBP17.1■□□□□ 0.33
CCDC84-210ENST00000583842 FAM50AQ14320 339 aaKnown RBP17.09■□□□□ 0.33
CCDC84-210ENST00000583842 TNRQ92752 1358 aa17.09■□□□□ 0.33
CCDC84-210ENST00000583842 ADGRL2O95490 1459 aa17.09■□□□□ 0.33
CCDC84-210ENST00000583842 RNF17Q9BXT8 1623 aaKnown RBP17.08■□□□□ 0.32
CCDC84-210ENST00000583842 A2ML1A8K2U0 1454 aa17.07■□□□□ 0.32
CCDC84-210ENST00000583842 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
CCDC84-210ENST00000583842 KANK1Q14678 1352 aa17.07■□□□□ 0.32
CCDC84-210ENST00000583842 CERKQ8TCT0 537 aa17.07■□□□□ 0.32
CCDC84-210ENST00000583842 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
CCDC84-210ENST00000583842 ROCK1Q13464 1354 aa17.06■□□□□ 0.32
CCDC84-210ENST00000583842 STRCQ7RTU9 1775 aa17.05■□□□□ 0.32
CCDC84-210ENST00000583842 ANKLE2Q86XL3 938 aa17.04■□□□□ 0.32
CCDC84-210ENST00000583842 ABCC3O15438 1527 aa17.04■□□□□ 0.32
CCDC84-210ENST00000583842 ZC3H13Q5T200 1668 aaKnown RBP17.02■□□□□ 0.32
CCDC84-210ENST00000583842 CAMSAP1Q5T5Y3 1602 aa17.01■□□□□ 0.31
CCDC84-210ENST00000583842 ANKRD50Q9ULJ7 1429 aa17.01■□□□□ 0.31
CCDC84-210ENST00000583842 CEP170BQ9Y4F5 1589 aaPredicted RBP17.01■□□□□ 0.31
CCDC84-210ENST00000583842 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
CCDC84-210ENST00000583842 NCKAP5LQ9HCH0 1330 aa17■□□□□ 0.31
CCDC84-210ENST00000583842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.313e-7■■■■□ 25.9
CCDC84-210ENST00000583842 ZNF142P52746 1687 aaPredicted RBP17■□□□□ 0.31
CCDC84-210ENST00000583842 LMTK2Q8IWU2 1503 aa17■□□□□ 0.31
CCDC84-210ENST00000583842 MROH1Q8NDA8 1641 aa16.99■□□□□ 0.31
CCDC84-210ENST00000583842 SPATA31D1Q6ZQQ2 1576 aa16.99■□□□□ 0.31
CCDC84-210ENST00000583842 SLC52A1Q9NWF4 448 aa16.99■□□□□ 0.31
CCDC84-210ENST00000583842 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
CCDC84-210ENST00000583842 MYO3AQ8NEV4 1616 aa16.97■□□□□ 0.31
CCDC84-210ENST00000583842 DEPDC5O75140 1603 aa16.96■□□□□ 0.31
CCDC84-210ENST00000583842 ERVK-7P63135 1459 aa16.96■□□□□ 0.31
CCDC84-210ENST00000583842 VWDEQ8N2E2 1590 aa16.96■□□□□ 0.31
CCDC84-210ENST00000583842 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
CCDC84-210ENST00000583842 MED14O60244 1454 aa16.94■□□□□ 0.3
CCDC84-210ENST00000583842 IQSEC2Q5JU85 1478 aa16.94■□□□□ 0.3
CCDC84-210ENST00000583842 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
CCDC84-210ENST00000583842 RPRD2Q5VT52 1461 aaKnown RBP16.93■□□□□ 0.3
CCDC84-210ENST00000583842 IDI1Q13907 227 aa16.92■□□□□ 0.3
CCDC84-210ENST00000583842 NOS1P29475 1434 aa16.91■□□□□ 0.3
CCDC84-210ENST00000583842 HDGFP51858 240 aaKnown RBP16.9■□□□□ 0.3
CCDC84-210ENST00000583842 LTBP4Q8N2S1 1624 aa16.89■□□□□ 0.29
CCDC84-210ENST00000583842 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
CCDC84-210ENST00000583842 EID1Q9Y6B2 187 aa16.89■□□□□ 0.29
CCDC84-210ENST00000583842 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
CCDC84-210ENST00000583842 ACIN1Q9UKV3 1341 aaKnown RBP16.88■□□□□ 0.29
CCDC84-210ENST00000583842 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
CCDC84-210ENST00000583842 NPHP4O75161 1426 aaPredicted RBP16.86■□□□□ 0.29
CCDC84-210ENST00000583842 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
CCDC84-210ENST00000583842 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
CCDC84-210ENST00000583842 TMEM2Q9UHN6 1383 aa16.85■□□□□ 0.29
CCDC84-210ENST00000583842 SLIT1O75093 1534 aa16.85■□□□□ 0.29
CCDC84-210ENST00000583842 LTKP29376 864 aa16.84■□□□□ 0.29
CCDC84-210ENST00000583842 ITGAEP38570 1179 aa16.84■□□□□ 0.29
CCDC84-210ENST00000583842 NUP155O75694 1391 aa16.84■□□□□ 0.29
CCDC84-210ENST00000583842 CEP152O94986 1710 aa16.83■□□□□ 0.28
CCDC84-210ENST00000583842 KDM5AP29375 1690 aaKnown RBP16.83■□□□□ 0.28
CCDC84-210ENST00000583842 EFCAB6Q5THR3 1501 aa16.82■□□□□ 0.28
CCDC84-210ENST00000583842 NEURL4Q96JN8 1562 aa16.8■□□□□ 0.28
CCDC84-210ENST00000583842 CPS1P31327 1500 aa16.8■□□□□ 0.28
CCDC84-210ENST00000583842 SCAF11Q99590 1463 aaKnown RBP16.8■□□□□ 0.28
CCDC84-210ENST00000583842 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCDC84-210ENST00000583842 UNC13BO14795 1591 aa16.79■□□□□ 0.28
CCDC84-210ENST00000583842 UBR1Q8IWV7 1749 aa16.78■□□□□ 0.28
CCDC84-210ENST00000583842 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
CCDC84-210ENST00000583842 TET3O43151 1660 aa16.78■□□□□ 0.28
CCDC84-210ENST00000583842 NAIPQ13075 1403 aa16.78■□□□□ 0.28
CCDC84-210ENST00000583842 TOM1O60784 492 aa16.76■□□□□ 0.27
CCDC84-210ENST00000583842 HFM1A2PYH4 1435 aa16.76■□□□□ 0.27
CCDC84-210ENST00000583842 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
CCDC84-210ENST00000583842 IQGAP3Q86VI3 1631 aa16.74■□□□□ 0.27
CCDC84-210ENST00000583842 SYNMO15061 1565 aa16.73■□□□□ 0.27
CCDC84-210ENST00000583842 KCNA6P17658 529 aa16.73■□□□□ 0.27
CCDC84-210ENST00000583842 TBX22Q9Y458 520 aa16.73■□□□□ 0.27
CCDC84-210ENST00000583842 PIK3C2BO00750 1634 aa16.72■□□□□ 0.27
CCDC84-210ENST00000583842 UBAP1LF5GYI3 381 aa16.72■□□□□ 0.27
CCDC84-210ENST00000583842 IQGAP1P46940 1657 aa16.71■□□□□ 0.27
CCDC84-210ENST00000583842 GCC2Q8IWJ2 1684 aa16.71■□□□□ 0.27
CCDC84-210ENST00000583842 PLEKHG1Q9ULL1 1385 aa16.69■□□□□ 0.26
CCDC84-210ENST00000583842 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
CCDC84-210ENST00000583842 ADGRB3O60242 1522 aa16.68■□□□□ 0.26
CCDC84-210ENST00000583842 E9PCH4 1651 aa16.66■□□□□ 0.26
CCDC84-210ENST00000583842 HRCP23327 699 aa16.66■□□□□ 0.26
CCDC84-210ENST00000583842 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms