RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 RBM33Q96EV2 1170 aaKnown RBP9.2□□□□□ -0.94
VAPA-206ENST00000583475 EN1Q05925 392 aaPredicted RBP9.19□□□□□ -0.94
VAPA-206ENST00000583475 C6orf132Q5T0Z8 1188 aa9.19□□□□□ -0.94
VAPA-206ENST00000583475 PTPREP23469 700 aa9.18□□□□□ -0.94
VAPA-206ENST00000583475 DMRTA1Q5VZB9 504 aa9.18□□□□□ -0.94
VAPA-206ENST00000583475 SPNS2Q8IVW8 549 aa9.18□□□□□ -0.94
VAPA-206ENST00000583475 KCNK17Q96T54 332 aa9.18□□□□□ -0.94
VAPA-206ENST00000583475 LSM11P83369 360 aaKnown RBP eCLIP9.17□□□□□ -0.94
VAPA-206ENST00000583475 COL9A1P20849 921 aa9.16□□□□□ -0.94
VAPA-206ENST00000583475 TSR1Q2NL82 804 aaKnown RBP9.16□□□□□ -0.94
VAPA-206ENST00000583475 MAP3K7O43318 606 aa9.15□□□□□ -0.94
VAPA-206ENST00000583475 ANKRD13DQ6ZTN6 518 aa9.14□□□□□ -0.95
VAPA-206ENST00000583475 SMYD5Q6GMV2 418 aa9.13□□□□□ -0.95
VAPA-206ENST00000583475 KCNH8Q96L42 1107 aa9.13□□□□□ -0.95
VAPA-206ENST00000583475 PPP1R3GB7ZBB8 358 aa9.12□□□□□ -0.95
VAPA-206ENST00000583475 MMRN1Q13201 1228 aa9.12□□□□□ -0.95
VAPA-206ENST00000583475 ZBED2Q9BTP6 218 aa9.12□□□□□ -0.95
VAPA-206ENST00000583475 TK2O00142 265 aa9.11□□□□□ -0.95
VAPA-206ENST00000583475 RBM26Q5T8P6 1007 aaKnown RBP9.11□□□□□ -0.95
VAPA-206ENST00000583475 SLC4A5Q9BY07 1137 aa9.11□□□□□ -0.95
VAPA-206ENST00000583475 CDHR5Q9HBB8 845 aa9.11□□□□□ -0.95
VAPA-206ENST00000583475 NPDC1Q9NQX5 325 aaPredicted RBP9.11□□□□□ -0.95
VAPA-206ENST00000583475 VPS9D1Q9Y2B5 631 aa9.1□□□□□ -0.95
VAPA-206ENST00000583475 ADGRD1Q6QNK2 874 aa9.09□□□□□ -0.95
VAPA-206ENST00000583475 NUTM2FA1L443 756 aa9.07□□□□□ -0.96
VAPA-206ENST00000583475 HRO43593 1189 aa9.07□□□□□ -0.96
VAPA-206ENST00000583475 PROX2Q3B8N5 592 aa9.07□□□□□ -0.96
VAPA-206ENST00000583475 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.07□□□□□ -0.96
VAPA-206ENST00000583475 CERKQ8TCT0 537 aa9.07□□□□□ -0.96
VAPA-206ENST00000583475 BHMG1C9JSJ3 638 aaPredicted RBP9.05□□□□□ -0.96
VAPA-206ENST00000583475 PRSS12P56730 875 aa9.05□□□□□ -0.96
VAPA-206ENST00000583475 PTGDRQ13258 359 aa9.05□□□□□ -0.96
VAPA-206ENST00000583475 ONECUT3O60422 494 aaPredicted RBP9.04□□□□□ -0.96
VAPA-206ENST00000583475 CDCA7LQ96GN5 454 aa9.04□□□□□ -0.96
VAPA-206ENST00000583475 TSKSQ9UJT2 592 aa9.04□□□□□ -0.96
VAPA-206ENST00000583475 TRIM6-TRIM34B2RNG4 842 aa9.03□□□□□ -0.96
VAPA-206ENST00000583475 TULP1O00294 542 aaPredicted RBP9.03□□□□□ -0.96
VAPA-206ENST00000583475 FAM198AQ9UFP1 575 aa9.03□□□□□ -0.96
VAPA-206ENST00000583475 KIAA1468Q9P260 1216 aa9.02□□□□□ -0.97
VAPA-206ENST00000583475 RABGEF1Q9UJ41 708 aa9.02□□□□□ -0.97
VAPA-206ENST00000583475 GPR37O15354 613 aa9.01□□□□□ -0.97
VAPA-206ENST00000583475 TTC13Q8NBP0 860 aa9.01□□□□□ -0.97
VAPA-206ENST00000583475 BCANQ96GW7 911 aa9.01□□□□□ -0.97
VAPA-206ENST00000583475 FCHSD2O94868 740 aa9□□□□□ -0.97
VAPA-206ENST00000583475 RBM27Q9P2N5 1060 aaKnown RBP9□□□□□ -0.97
VAPA-206ENST00000583475 C3orf80F5H4A9 247 aa8.99□□□□□ -0.97
VAPA-206ENST00000583475 LMOD2Q6P5Q4 547 aa8.99□□□□□ -0.97
VAPA-206ENST00000583475 PADI6Q6TGC4 694 aa8.99□□□□□ -0.97
VAPA-206ENST00000583475 PACS2Q86VP3 889 aa8.99□□□□□ -0.97
VAPA-206ENST00000583475 HIC1Q14526 733 aa8.98□□□□□ -0.97
VAPA-206ENST00000583475 GPIHBP1Q8IV16 184 aa8.98□□□□□ -0.97
VAPA-206ENST00000583475 MYT1LQ9UL68 1186 aa8.97□□□□□ -0.97
VAPA-206ENST00000583475 FECHP22830 423 aa8.96□□□□□ -0.98
VAPA-206ENST00000583475 STAC3Q96MF2 364 aa8.96□□□□□ -0.98
VAPA-206ENST00000583475 GNPATO15228 680 aa8.95□□□□□ -0.98
VAPA-206ENST00000583475 MRPL50Q8N5N7 158 aaKnown RBP8.95□□□□□ -0.98
VAPA-206ENST00000583475 TATDN2Q93075 761 aa8.95□□□□□ -0.98
VAPA-206ENST00000583475 NBPF3Q9H094 633 aa8.95□□□□□ -0.98
VAPA-206ENST00000583475 LAPTM4BQ86VI4 370 aa8.94□□□□□ -0.98
VAPA-206ENST00000583475 RNF166Q96A37 237 aaPredicted RBP8.94□□□□□ -0.98
VAPA-206ENST00000583475 SEPT9Q9UHD8 586 aaPredicted RBP8.94□□□□□ -0.98
VAPA-206ENST00000583475 SMAPO00193 183 aa8.93□□□□□ -0.98
VAPA-206ENST00000583475 NUDT18Q6ZVK8 323 aa8.93□□□□□ -0.98
VAPA-206ENST00000583475 PNMA3Q9UL41 463 aa8.93□□□□□ -0.98
VAPA-206ENST00000583475 FAM161AQ3B820 660 aa8.92□□□□□ -0.98
VAPA-206ENST00000583475 EYA1Q99502 592 aa8.92□□□□□ -0.98
VAPA-206ENST00000583475 NBPF26B4DH59 902 aa8.91□□□□□ -0.98
VAPA-206ENST00000583475 FAM98CQ17RN3 349 aaKnown RBP8.91□□□□□ -0.98
VAPA-206ENST00000583475 ZC3H15Q8WU90 426 aaKnown RBP8.91□□□□□ -0.98
VAPA-206ENST00000583475 ADGRG1Q9Y653 693 aa8.91□□□□□ -0.98
VAPA-206ENST00000583475 ZFRQ96KR1 1074 aaKnown RBP8.9□□□□□ -0.98
VAPA-206ENST00000583475 GOLGA8CPA6NN73 597 aa8.89□□□□□ -0.99
VAPA-206ENST00000583475 KCTD12Q96CX2 325 aaKnown RBP8.88□□□□□ -0.99
VAPA-206ENST00000583475 ZMYND10O75800 440 aa8.87□□□□□ -0.99
VAPA-206ENST00000583475 WNT2BQ93097 391 aa8.87□□□□□ -0.99
VAPA-206ENST00000583475 OATP04181 439 aa8.86□□□□□ -0.99
VAPA-206ENST00000583475 BARGINQ6ZT62 677 aa8.86□□□□□ -0.99
VAPA-206ENST00000583475 RBM46Q8TBY0 533 aaKnown RBP8.86□□□□□ -0.99
VAPA-206ENST00000583475 PXYLP1Q8TE99 480 aa8.86□□□□□ -0.99
VAPA-206ENST00000583475 MINK1Q8N4C8 1332 aaPredicted RBP8.84□□□□□ -0.99
VAPA-206ENST00000583475 IRF6O14896 467 aa8.84□□□□□ -0.99
VAPA-206ENST00000583475 MAP2K5Q13163 448 aa8.84□□□□□ -0.99
VAPA-206ENST00000583475 THSD4Q6ZMP0 1018 aa8.84□□□□□ -0.99
VAPA-206ENST00000583475 METTL3Q86U44 580 aaKnown RBP8.84□□□□□ -0.99
VAPA-206ENST00000583475 ANKK1Q8NFD2 765 aa8.84□□□□□ -0.99
VAPA-206ENST00000583475 RCCD1A6NED2 376 aa8.83□□□□□ -1
VAPA-206ENST00000583475 SOWAHBA6NEL2 793 aa8.83□□□□□ -1
VAPA-206ENST00000583475 SAMD7Q7Z3H4 446 aa8.83□□□□□ -1
VAPA-206ENST00000583475 PHOX2BQ99453 314 aa8.83□□□□□ -1
VAPA-206ENST00000583475 BCAMP50895 628 aa8.82□□□□□ -1
VAPA-206ENST00000583475 DNAJB2P25686 324 aa8.81□□□□□ -1
VAPA-206ENST00000583475 SWT1Q5T5J6 900 aaKnown RBP8.81□□□□□ -1
VAPA-206ENST00000583475 KRI1Q8N9T8 703 aaKnown RBP8.81□□□□□ -1
VAPA-206ENST00000583475 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.81□□□□□ -1
VAPA-206ENST00000583475 HDGFP51858 240 aaKnown RBP8.8□□□□□ -1
VAPA-206ENST00000583475 PTPN5P54829 565 aa8.8□□□□□ -1
VAPA-206ENST00000583475 LRCH3Q96II8 777 aa8.8□□□□□ -1
VAPA-206ENST00000583475 TMEM134Q9H6X4 195 aa8.8□□□□□ -1
VAPA-206ENST00000583475 HCSTQ9UBK5 93 aa8.8□□□□□ -1
VAPA-206ENST00000583475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms