RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.14
ERBB2-213ENST00000582818 KIF3BO15066 747 aa22.19■■□□□ 1.14
ERBB2-213ENST00000582818 TSPY4P0CV99 314 aa22.19■■□□□ 1.14
ERBB2-213ENST00000582818 TSPY10P0CW01 314 aa22.19■■□□□ 1.14
ERBB2-213ENST00000582818 PZPP20742 1482 aa22.19■■□□□ 1.14
ERBB2-213ENST00000582818 LRRC9Q6ZRR7 1453 aa22.18■■□□□ 1.14
ERBB2-213ENST00000582818 NCKAP5LQ9HCH0 1330 aa22.18■■□□□ 1.14
ERBB2-213ENST00000582818 DNMT1P26358 1616 aaKnown RBP22.17■■□□□ 1.14
ERBB2-213ENST00000582818 MAST1Q9Y2H9 1570 aa22.15■■□□□ 1.14
ERBB2-213ENST00000582818 TNRQ92752 1358 aa22.14■■□□□ 1.14
ERBB2-213ENST00000582818 WASHC2CQ9Y4E1 1318 aa22.14■■□□□ 1.14
ERBB2-213ENST00000582818 MIA2Q96PC5 1412 aa22.13■■□□□ 1.13
ERBB2-213ENST00000582818 NLRP1Q9C000 1473 aa22.12■■□□□ 1.13
ERBB2-213ENST00000582818 POLR1AO95602 1720 aaPredicted RBP22.11■■□□□ 1.13
ERBB2-213ENST00000582818 RNF17Q9BXT8 1623 aaKnown RBP22.11■■□□□ 1.13
ERBB2-213ENST00000582818 ZNF335Q9H4Z2 1342 aaPredicted RBP22.1■■□□□ 1.13
ERBB2-213ENST00000582818 ZC3H13Q5T200 1668 aaKnown RBP22.1■■□□□ 1.13
ERBB2-213ENST00000582818 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
ERBB2-213ENST00000582818 FBXO31Q5XUX0 539 aaPredicted RBP22.07■■□□□ 1.12
ERBB2-213ENST00000582818 THEMISQ8N1K5 641 aaPredicted RBP22.07■■□□□ 1.12
ERBB2-213ENST00000582818 MYOM3Q5VTT5 1437 aa22.06■■□□□ 1.12
ERBB2-213ENST00000582818 DISP3Q9P2K9 1392 aa22.05■■□□□ 1.12
ERBB2-213ENST00000582818 ANKLE2Q86XL3 938 aa22.04■■□□□ 1.12
ERBB2-213ENST00000582818 DEPDC5O75140 1603 aa22.04■■□□□ 1.12
ERBB2-213ENST00000582818 CPS1P31327 1500 aa22.04■■□□□ 1.12
ERBB2-213ENST00000582818 NEURL4Q96JN8 1562 aa22.04■■□□□ 1.12
ERBB2-213ENST00000582818 UGGT1Q9NYU2 1555 aa22.03■■□□□ 1.12
ERBB2-213ENST00000582818 MED14O60244 1454 aa22.03■■□□□ 1.12
ERBB2-213ENST00000582818 ABCC3O15438 1527 aa22.02■■□□□ 1.12
ERBB2-213ENST00000582818 SPATA31D1Q6ZQQ2 1576 aa22.01■■□□□ 1.11
ERBB2-213ENST00000582818 UBAP1LF5GYI3 381 aa22.01■■□□□ 1.11
ERBB2-213ENST00000582818 DUOX2Q9NRD8 1548 aa22.01■■□□□ 1.11
ERBB2-213ENST00000582818 KANK4Q5T7N3 995 aaPredicted RBP21.99■■□□□ 1.11
ERBB2-213ENST00000582818 SHANK2Q9UPX8 1470 aa21.98■■□□□ 1.11
ERBB2-213ENST00000582818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.97■■□□□ 1.11
ERBB2-213ENST00000582818 MROH1Q8NDA8 1641 aa21.96■■□□□ 1.11
ERBB2-213ENST00000582818 NPHP4O75161 1426 aaPredicted RBP21.95■■□□□ 1.1
ERBB2-213ENST00000582818 ERVK-7P63135 1459 aa21.95■■□□□ 1.1
ERBB2-213ENST00000582818 ARHGAP31Q2M1Z3 1444 aa21.94■■□□□ 1.1
ERBB2-213ENST00000582818 ERBINQ96RT1 1412 aa21.94■■□□□ 1.1
ERBB2-213ENST00000582818 CROCC2H7BZ55 1655 aa21.93■■□□□ 1.1
ERBB2-213ENST00000582818 TOM1O60784 492 aa21.93■■□□□ 1.1
ERBB2-213ENST00000582818 IQGAP1P46940 1657 aa21.92■■□□□ 1.1
ERBB2-213ENST00000582818 VWDEQ8N2E2 1590 aa21.92■■□□□ 1.1
ERBB2-213ENST00000582818 APLP2Q06481 763 aa21.92■■□□□ 1.1
ERBB2-213ENST00000582818 CFAP65Q6ZU64 1925 aaKnown RBP21.92■■□□□ 1.1
ERBB2-213ENST00000582818 PRDM15P57071 1507 aaPredicted RBP21.91■■□□□ 1.1
ERBB2-213ENST00000582818 SOCS7O14512 581 aa21.91■■□□□ 1.1
ERBB2-213ENST00000582818 CEP152O94986 1710 aa21.91■■□□□ 1.1
ERBB2-213ENST00000582818 KIF15Q9NS87 1388 aa21.9■■□□□ 1.1
ERBB2-213ENST00000582818 PTPN23Q9H3S7 1636 aa21.9■■□□□ 1.1
ERBB2-213ENST00000582818 ILDR2Q71H61 639 aa21.89■■□□□ 1.09
ERBB2-213ENST00000582818 ABCC5O15440 1437 aa21.89■■□□□ 1.09
ERBB2-213ENST00000582818 UBR1Q8IWV7 1749 aa21.88■■□□□ 1.09
ERBB2-213ENST00000582818 DAPK1P53355 1430 aa21.84■■□□□ 1.09
ERBB2-213ENST00000582818 FGD6Q6ZV73 1430 aa21.84■■□□□ 1.09
ERBB2-213ENST00000582818 SLIT1O75093 1534 aa21.84■■□□□ 1.09
ERBB2-213ENST00000582818 SYNMO15061 1565 aa21.83■■□□□ 1.09
ERBB2-213ENST00000582818 KANK1Q14678 1352 aa21.83■■□□□ 1.08
ERBB2-213ENST00000582818 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.08
ERBB2-213ENST00000582818 KDM5AP29375 1690 aaKnown RBP21.82■■□□□ 1.08
ERBB2-213ENST00000582818 SCAF11Q99590 1463 aaKnown RBP21.82■■□□□ 1.08
ERBB2-213ENST00000582818 RRP7BPQ9NSQ0 103 aa21.81■■□□□ 1.08
ERBB2-213ENST00000582818 ANKRD30AQ9BXX3 1397 aa21.81■■□□□ 1.08
ERBB2-213ENST00000582818 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
ERBB2-213ENST00000582818 STRCP1A6NGW2 1772 aa21.78■■□□□ 1.08
ERBB2-213ENST00000582818 LRRC7Q96NW7 1537 aa21.77■■□□□ 1.08
ERBB2-213ENST00000582818 HSPA1LP34931 641 aa21.77■■□□□ 1.08
ERBB2-213ENST00000582818 PIP4K2BP78356 416 aa21.76■■□□□ 1.07
ERBB2-213ENST00000582818 EID1Q9Y6B2 187 aa21.76■■□□□ 1.07
ERBB2-213ENST00000582818 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
ERBB2-213ENST00000582818 ALKQ9UM73 1620 aa21.74■■□□□ 1.07
ERBB2-213ENST00000582818 TXNDC2Q86VQ3 553 aa21.74■■□□□ 1.07
ERBB2-213ENST00000582818 ADGRL2O95490 1459 aa21.74■■□□□ 1.07
ERBB2-213ENST00000582818 PIK3C2BO00750 1634 aa21.73■■□□□ 1.07
ERBB2-213ENST00000582818 TMEM2Q9UHN6 1383 aa21.73■■□□□ 1.07
ERBB2-213ENST00000582818 LTKP29376 864 aa21.72■■□□□ 1.07
ERBB2-213ENST00000582818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.71■■□□□ 1.07
ERBB2-213ENST00000582818 EFCAB6Q5THR3 1501 aa21.7■■□□□ 1.06
ERBB2-213ENST00000582818 MED1Q15648 1581 aaPredicted RBP21.7■■□□□ 1.06
ERBB2-213ENST00000582818 SLC52A1Q9NWF4 448 aa21.68■■□□□ 1.06
ERBB2-213ENST00000582818 STAG3Q9UJ98 1225 aa21.68■■□□□ 1.06
ERBB2-213ENST00000582818 NOS1P29475 1434 aa21.68■■□□□ 1.06
ERBB2-213ENST00000582818 RPRD2Q5VT52 1461 aaKnown RBP21.68■■□□□ 1.06
ERBB2-213ENST00000582818 IDI1Q13907 227 aa21.66■■□□□ 1.06
ERBB2-213ENST00000582818 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
ERBB2-213ENST00000582818 XIRP1Q702N8 1843 aaKnown RBP21.64■■□□□ 1.05
ERBB2-213ENST00000582818 ANKRD50Q9ULJ7 1429 aa21.63■■□□□ 1.05
ERBB2-213ENST00000582818 ADGRB3O60242 1522 aa21.62■■□□□ 1.05
ERBB2-213ENST00000582818 TET3O43151 1660 aa21.62■■□□□ 1.05
ERBB2-213ENST00000582818 KCNA6P17658 529 aa21.6■■□□□ 1.05
ERBB2-213ENST00000582818 FAM50AQ14320 339 aaKnown RBP21.58■■□□□ 1.05
ERBB2-213ENST00000582818 FAM135BQ49AJ0 1406 aa21.57■■□□□ 1.04
ERBB2-213ENST00000582818 HDGFP51858 240 aaKnown RBP21.57■■□□□ 1.04
ERBB2-213ENST00000582818 GCC2Q8IWJ2 1684 aa21.56■■□□□ 1.04
ERBB2-213ENST00000582818 NKTRP30414 1462 aaKnown RBP21.56■■□□□ 1.04
ERBB2-213ENST00000582818 ROCK1Q13464 1354 aa21.55■■□□□ 1.04
ERBB2-213ENST00000582818 UNC13BO14795 1591 aa21.54■■□□□ 1.04
ERBB2-213ENST00000582818 NWD1Q149M9 1564 aa21.53■■□□□ 1.04
ERBB2-213ENST00000582818 TMEM94Q12767 1356 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms