RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 NCKAP5LQ9HCH0 1330 aa22.94■■□□□ 1.26
ITGB4-208ENST00000582629 TSPY4P0CV99 314 aa22.93■■□□□ 1.26
ITGB4-208ENST00000582629 TSPY10P0CW01 314 aa22.93■■□□□ 1.26
ITGB4-208ENST00000582629 PKD2Q13563 968 aa22.93■■□□□ 1.26
ITGB4-208ENST00000582629 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
ITGB4-208ENST00000582629 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
ITGB4-208ENST00000582629 MAST1Q9Y2H9 1570 aa22.91■■□□□ 1.26
ITGB4-208ENST00000582629 PZPP20742 1482 aa22.91■■□□□ 1.26
ITGB4-208ENST00000582629 DNMT1P26358 1616 aaKnown RBP22.9■■□□□ 1.26
ITGB4-208ENST00000582629 WASHC2CQ9Y4E1 1318 aa22.88■■□□□ 1.25
ITGB4-208ENST00000582629 TNRQ92752 1358 aa22.88■■□□□ 1.25
ITGB4-208ENST00000582629 KANK4Q5T7N3 995 aaPredicted RBP22.87■■□□□ 1.25
ITGB4-208ENST00000582629 MIA2Q96PC5 1412 aa22.87■■□□□ 1.25
ITGB4-208ENST00000582629 MYOM3Q5VTT5 1437 aa22.86■■□□□ 1.25
ITGB4-208ENST00000582629 RNF17Q9BXT8 1623 aaKnown RBP22.86■■□□□ 1.25
ITGB4-208ENST00000582629 EIF2AK4Q9P2K8 1649 aaKnown RBP22.84■■□□□ 1.25
ITGB4-208ENST00000582629 FBXO31Q5XUX0 539 aaPredicted RBP22.84■■□□□ 1.25
ITGB4-208ENST00000582629 POLR1AO95602 1720 aaPredicted RBP22.84■■□□□ 1.25
ITGB4-208ENST00000582629 ZNF335Q9H4Z2 1342 aaPredicted RBP22.83■■□□□ 1.25
ITGB4-208ENST00000582629 ZC3H13Q5T200 1668 aaKnown RBP22.83■■□□□ 1.24
ITGB4-208ENST00000582629 NLRP1Q9C000 1473 aa22.79■■□□□ 1.24
ITGB4-208ENST00000582629 ABCC3O15438 1527 aa22.79■■□□□ 1.24
ITGB4-208ENST00000582629 NEURL4Q96JN8 1562 aa22.77■■□□□ 1.24
ITGB4-208ENST00000582629 DUOX2Q9NRD8 1548 aa22.76■■□□□ 1.23
ITGB4-208ENST00000582629 MROH1Q8NDA8 1641 aa22.75■■□□□ 1.23
ITGB4-208ENST00000582629 APLP2Q06481 763 aa22.75■■□□□ 1.23
ITGB4-208ENST00000582629 UGGT1Q9NYU2 1555 aa22.75■■□□□ 1.23
ITGB4-208ENST00000582629 CROCC2H7BZ55 1655 aa22.74■■□□□ 1.23
ITGB4-208ENST00000582629 THEMISQ8N1K5 641 aaPredicted RBP22.74■■□□□ 1.23
ITGB4-208ENST00000582629 SPATA31D1Q6ZQQ2 1576 aa22.74■■□□□ 1.23
ITGB4-208ENST00000582629 SHANK2Q9UPX8 1470 aa22.73■■□□□ 1.23
ITGB4-208ENST00000582629 PTPN23Q9H3S7 1636 aa22.73■■□□□ 1.23
ITGB4-208ENST00000582629 CEP152O94986 1710 aa22.72■■□□□ 1.23
ITGB4-208ENST00000582629 ANKLE2Q86XL3 938 aa22.72■■□□□ 1.23
ITGB4-208ENST00000582629 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.72■■□□□ 1.23
ITGB4-208ENST00000582629 UBAP1LF5GYI3 381 aa22.7■■□□□ 1.22
ITGB4-208ENST00000582629 ABCC5O15440 1437 aa22.7■■□□□ 1.22
ITGB4-208ENST00000582629 ERVK-7P63135 1459 aa22.7■■□□□ 1.22
ITGB4-208ENST00000582629 DEPDC5O75140 1603 aa22.7■■□□□ 1.22
ITGB4-208ENST00000582629 CPS1P31327 1500 aa22.69■■□□□ 1.22
ITGB4-208ENST00000582629 DISP3Q9P2K9 1392 aa22.69■■□□□ 1.22
ITGB4-208ENST00000582629 ERBINQ96RT1 1412 aa22.68■■□□□ 1.22
ITGB4-208ENST00000582629 KIF15Q9NS87 1388 aa22.68■■□□□ 1.22
ITGB4-208ENST00000582629 PRDM15P57071 1507 aaPredicted RBP22.67■■□□□ 1.22
ITGB4-208ENST00000582629 MED14O60244 1454 aa22.67■■□□□ 1.22
ITGB4-208ENST00000582629 NPHP4O75161 1426 aaPredicted RBP22.66■■□□□ 1.22
ITGB4-208ENST00000582629 CFAP65Q6ZU64 1925 aaKnown RBP22.66■■□□□ 1.22
ITGB4-208ENST00000582629 DAPK1P53355 1430 aa22.65■■□□□ 1.22
ITGB4-208ENST00000582629 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
ITGB4-208ENST00000582629 IQGAP1P46940 1657 aa22.64■■□□□ 1.21
ITGB4-208ENST00000582629 VWDEQ8N2E2 1590 aa22.63■■□□□ 1.21
ITGB4-208ENST00000582629 RRP7BPQ9NSQ0 103 aa22.62■■□□□ 1.21
ITGB4-208ENST00000582629 UBR1Q8IWV7 1749 aa22.62■■□□□ 1.21
ITGB4-208ENST00000582629 ARHGAP31Q2M1Z3 1444 aa22.61■■□□□ 1.21
ITGB4-208ENST00000582629 ANKRD30AQ9BXX3 1397 aa22.57■■□□□ 1.2
ITGB4-208ENST00000582629 KANK1Q14678 1352 aa22.56■■□□□ 1.2
ITGB4-208ENST00000582629 TOM1O60784 492 aa22.55■■□□□ 1.2
ITGB4-208ENST00000582629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.55■■□□□ 1.2
ITGB4-208ENST00000582629 ILDR2Q71H61 639 aa22.54■■□□□ 1.2
ITGB4-208ENST00000582629 SCAF11Q99590 1463 aaKnown RBP22.53■■□□□ 1.2
ITGB4-208ENST00000582629 SLIT1O75093 1534 aa22.52■■□□□ 1.2
ITGB4-208ENST00000582629 LMTK2Q8IWU2 1503 aa22.52■■□□□ 1.2
ITGB4-208ENST00000582629 CHIC2Q9UKJ5 165 aa22.52■■□□□ 1.2
ITGB4-208ENST00000582629 STRCP1A6NGW2 1772 aa22.52■■□□□ 1.2
ITGB4-208ENST00000582629 ARHGAP23Q9P227 1491 aa22.52■■□□□ 1.2
ITGB4-208ENST00000582629 SCAF1Q9H7N4 1312 aaKnown RBP22.51■■□□□ 1.19
ITGB4-208ENST00000582629 SYNMO15061 1565 aa22.5■■□□□ 1.19
ITGB4-208ENST00000582629 PIK3C2BO00750 1634 aa22.5■■□□□ 1.19
ITGB4-208ENST00000582629 ADGRL2O95490 1459 aa22.5■■□□□ 1.19
ITGB4-208ENST00000582629 PIP4K2BP78356 416 aa22.49■■□□□ 1.19
ITGB4-208ENST00000582629 LRRC7Q96NW7 1537 aa22.47■■□□□ 1.19
ITGB4-208ENST00000582629 KDM5AP29375 1690 aaKnown RBP22.47■■□□□ 1.19
ITGB4-208ENST00000582629 TXNDC2Q86VQ3 553 aa22.47■■□□□ 1.19
ITGB4-208ENST00000582629 LTKP29376 864 aa22.46■■□□□ 1.19
ITGB4-208ENST00000582629 HSPA1LP34931 641 aa22.45■■□□□ 1.18
ITGB4-208ENST00000582629 EID1Q9Y6B2 187 aa22.45■■□□□ 1.18
ITGB4-208ENST00000582629 EFCAB6Q5THR3 1501 aa22.45■■□□□ 1.18
ITGB4-208ENST00000582629 ALKQ9UM73 1620 aa22.45■■□□□ 1.18
ITGB4-208ENST00000582629 SOCS7O14512 581 aa22.44■■□□□ 1.18
ITGB4-208ENST00000582629 FAM50AQ14320 339 aaKnown RBP22.44■■□□□ 1.18
ITGB4-208ENST00000582629 TMEM2Q9UHN6 1383 aa22.44■■□□□ 1.18
ITGB4-208ENST00000582629 STAG3Q9UJ98 1225 aa22.43■■□□□ 1.18
ITGB4-208ENST00000582629 NOS1P29475 1434 aa22.41■■□□□ 1.18
ITGB4-208ENST00000582629 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
ITGB4-208ENST00000582629 IDI1Q13907 227 aa22.39■■□□□ 1.17
ITGB4-208ENST00000582629 ADGRB3O60242 1522 aa22.38■■□□□ 1.17
ITGB4-208ENST00000582629 RPRD2Q5VT52 1461 aaKnown RBP22.37■■□□□ 1.17
ITGB4-208ENST00000582629 MED1Q15648 1581 aaPredicted RBP22.36■■□□□ 1.17
ITGB4-208ENST00000582629 XIRP1Q702N8 1843 aaKnown RBP22.35■■□□□ 1.17
ITGB4-208ENST00000582629 TET3O43151 1660 aa22.35■■□□□ 1.17
ITGB4-208ENST00000582629 SLC52A1Q9NWF4 448 aa22.34■■□□□ 1.17
ITGB4-208ENST00000582629 UNC13BO14795 1591 aa22.33■■□□□ 1.16
ITGB4-208ENST00000582629 GCC2Q8IWJ2 1684 aa22.32■■□□□ 1.16
ITGB4-208ENST00000582629 ROCK1Q13464 1354 aa22.28■■□□□ 1.16
ITGB4-208ENST00000582629 MYO5BQ9ULV0 1848 aa22.27■■□□□ 1.16
ITGB4-208ENST00000582629 KCNA6P17658 529 aa22.26■■□□□ 1.15
ITGB4-208ENST00000582629 SLC26A8Q96RN1 970 aa22.25■■□□□ 1.15
ITGB4-208ENST00000582629 NWD1Q149M9 1564 aa22.25■■□□□ 1.15
ITGB4-208ENST00000582629 TMEM94Q12767 1356 aa22.25■■□□□ 1.15
ITGB4-208ENST00000582629 TMEM131LA2VDJ0 1609 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms